FFCP PHASE1:Hg19::chr12:53492630..53492661,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3489 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5475 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_ENST00000549628_5end | |||
|description=CAGE_peak_4_at_IGFBP6_5end | |||
|id=chr12:53492630..53492661,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.73e-40!180;CL:0000680!2.37e-27!57;CL:0000056!2.37e-27!57;CL:0000355!2.37e-27!57;CL:0000183!3.72e-26!59;CL:0000187!5.96e-26!54;CL:0000192!1.86e-21!42;CL:0000514!1.86e-21!42;CL:0000393!5.10e-21!60;CL:0000211!5.10e-21!60;CL:0000057!1.56e-19!75;CL:0000222!3.03e-19!119;CL:0000359!5.41e-17!32;CL:0000548!8.35e-12!679;CL:0000004!8.35e-12!679;CL:0000255!8.35e-12!679;CL:0000012!2.39e-11!682;CL:0000144!2.67e-11!625;CL:0000220!4.03e-11!246;CL:0002321!9.73e-11!248;CL:0002371!2.57e-10!591;CL:0002620!4.96e-10!23;CL:0002494!4.10e-08!16;CL:0000048!1.20e-07!430;CL:0000003!3.40e-07!722;CL:0000723!6.33e-07!436;CL:0002539!8.40e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.95e-23;32!CL:0000192;1.56e-19;43!CL:0000187;1.15e-15;55!CL:0000393;9.17e-13;61!CL:0000211;9.17e-13;61!CL:0002595;8.46e-09;5!CL:0002494;1.22e-08;16!CL:0002539;9.08e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.42e-29,58;CL:0000056,2.42e-29,58;CL:0000355,2.42e-29,58;CL:0000187,8.11e-28,55;CL:0000192,2.45e-26,43;CL:0000514,2.45e-26,43;CL:0000359,5.69e-24,32;CL:0000393,6.15e-24,61;CL:0000211,6.15e-24,61;CL:0000222,6.94e-16,121;CL:0000048,6.21e-11,427;CL:0000723,1.91e-10,433;CL:0000034,8.06e-10,441;CL:0002595,5.40e-09,5;CL:0002494,9.07e-09,16;CL:0002321,1.80e-08,250;CL:0000057,3.47e-07,76;CL:0002539,6.57e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.56e-19;43!CL:0000355;1.26e-15;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.32e-29!70;UBERON:0000914!8.72e-29!83;UBERON:0002329!8.72e-29!83;UBERON:0003077!8.72e-29!83;UBERON:0003059!8.72e-29!83;UBERON:0007282!8.72e-29!83;UBERON:0009618!8.72e-29!83;UBERON:0007285!8.72e-29!83;UBERON:0000486!1.51e-27!82;UBERON:0001134!4.86e-25!61;UBERON:0002036!4.86e-25!61;UBERON:0003082!4.86e-25!61;UBERON:0002385!5.80e-25!63;UBERON:0001015!5.80e-25!63;UBERON:0000383!5.80e-25!63;UBERON:0005256!9.44e-18!143;UBERON:0001637!3.06e-16!42;UBERON:0003509!3.06e-16!42;UBERON:0004572!3.06e-16!42;UBERON:0002100!1.96e-14!216;UBERON:0004573!1.51e-13!33;UBERON:0004571!1.51e-13!33;UBERON:0004872!5.64e-13!84;UBERON:0000475!7.56e-12!365;UBERON:0001981!1.16e-11!60;UBERON:0007500!1.16e-11!60;UBERON:0004537!1.16e-11!60;UBERON:0006965!1.16e-11!60;UBERON:0000490!1.58e-11!138;UBERON:0002049!3.75e-10!79;UBERON:0007798!3.75e-10!79;UBERON:0003104!8.90e-10!238;UBERON:0009142!8.90e-10!238;UBERON:0003102!1.10e-09!95;UBERON:0000119!1.17e-09!312;UBERON:0003914!1.26e-09!118;UBERON:0000055!1.31e-09!69;UBERON:0000481!2.00e-09!347;UBERON:0000483!5.78e-09!309;UBERON:0004535!2.34e-08!110;UBERON:0001009!1.23e-07!113;UBERON:0002199!2.40e-07!45;UBERON:0002416!2.40e-07!45;UBERON:0001135!3.65e-07!15;UBERON:0002097!7.25e-07!40;UBERON:0004237!8.40e-07!10;UBERON:0004695!8.40e-07!10;UBERON:0002111!8.40e-07!10;UBERON:0004178!8.40e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.32e-13;33!UBERON:0004571;4.32e-13;33!UBERON:0001637;1.14e-11;42!UBERON:0003509;1.14e-11;42!UBERON:0004572;1.14e-11;42!UBERON:0003834;8.46e-09;5!UBERON:0001533;8.46e-09;5!UBERON:0004905;4.20e-07;8!UBERON:0000982;4.20e-07;8!UBERON:0004770;4.20e-07;8!UBERON:0004237;9.08e-07;10!UBERON:0004695;9.08e-07;10!UBERON:0002111;9.08e-07;10!UBERON:0004178;9.08e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.60e-30,71;UBERON:0003059,5.60e-30,71;UBERON:0007282,5.60e-30,71;UBERON:0004290,5.60e-30,71;UBERON:0009618,5.60e-30,71;UBERON:0003077,2.28e-29,72;UBERON:0007285,2.28e-29,72;UBERON:0007524,8.95e-29,73;UBERON:0007503,1.80e-27,78;UBERON:0000486,1.06e-26,83;UBERON:0001134,1.18e-26,62;UBERON:0002036,1.18e-26,62;UBERON:0003082,1.18e-26,62;UBERON:0002385,1.94e-25,64;UBERON:0001015,1.94e-25,64;UBERON:0000383,1.94e-25,64;UBERON:0001637,5.11e-18,42;UBERON:0003509,5.11e-18,42;UBERON:0004572,5.11e-18,42;UBERON:0005256,3.67e-16,122;UBERON:0004573,2.53e-15,33;UBERON:0004571,2.53e-15,33;UBERON:0003104,1.67e-14,160;UBERON:0009142,1.67e-14,160;UBERON:0004872,3.70e-12,83;UBERON:0000490,7.54e-12,148;UBERON:0007500,1.17e-10,59;UBERON:0001981,1.17e-10,59;UBERON:0004537,1.17e-10,59;UBERON:0006965,1.17e-10,59;UBERON:0002204,4.55e-10,167;UBERON:0002100,9.61e-10,199;UBERON:0000055,2.97e-09,68;UBERON:0003834,5.40e-09,5;UBERON:0001533,5.40e-09,5;UBERON:0002049,6.91e-08,78;UBERON:0007798,6.91e-08,78;UBERON:0004535,8.37e-08,109;UBERON:0004905,1.84e-07,8;UBERON:0000982,1.84e-07,8;UBERON:0004770,1.84e-07,8;UBERON:0001009,2.29e-07,112;UBERON:0003914,2.59e-07,117;UBERON:0000926,3.38e-07,315;UBERON:0004120,3.38e-07,315;UBERON:0006603,3.38e-07,315;UBERON:0004237,6.57e-07,10;UBERON:0004695,6.57e-07,10;UBERON:0002111,6.57e-07,10;UBERON:0004178,6.57e-07,10 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,1.26343974685366,0,0.245733936501509,0.697801167972428,0,0.263766978228454,1.98026164736075,2.65117900582333,0.672325146451775,0.602694528023977,1.46062018077475,1.46379839637152,0.738726348460727,2.85600967741954,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.53435074212236,2.53007406669196,2.00535164254356,1.88300474649071,0,0.486634870302636,0.283604451492204,1.33037638477538,0.966182642624386,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.886413581652058,0.662045904066094,0.286836620748814,0.709336764396714,1.12135520028461,0,1.72667283892012,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0.468642863667593,3.74592092196385,2.2818872861778,2.39117888882882,0.587172493218824,0.809364721840658,0.280901613404497,1.02077085627447,0.737005903870608,1.23990937410919,0,0.741800787835671,0.910161361938026,2.15585442544872,0.336672227908132,0.500474079487857,0,0.877955241761676,1.22595118319608,0.600952235626387,0.567160915800105,0.89694817844431,0.213557388818567,1.27159140695737,0.600182192168805,0.721367704669072,0.257640540045629,0.930584281657949,1.35021065793013,1.36411807225678,0.504867548488229,0.644349290496095,1.2931684545505,0.355009592516614,1.10827308050404,1.18692414617341,0.386521706326594,0.272746120590835,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0.643240938192885,1.38134921352481,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,1.30788020649984,0.7333828582095,0.387815147273333,0,0.845302752556,0.797814349754612,4.16029747645464,1.02882949704857,0,0.532844358032199,0,0.542621605391443,0.823240336780769,1.62868092146868,0.710783897485092,1.58390374586686,0.602878754119172,1.74306691720059,0.699810938274399,0,0,0,0.239624855491583,0,1.42636905040718,1.73737568001095,1.84928690295345,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.50085260529839,3.25518028439683,2.28767947683888,0.892144943985809,0.946214490203608,0.468565659970853,0.300946099727719,2.27407504055985,2.0694614258501,0,0.921845842708516,1.04260337361699,0.587403472388222,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.160853921143607,1.48418066444991,1.54209693802656,1.77561725313127,0.98552587216571,2.59627214591811,2.44041794765914,0,0.200506470303285,0,0.803701137152247,1.0925470080403,1.31124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,1.35473218771926,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,1.35339005608971,1.07834031980251,0.307007349452259,0.551346289938122,0.644521469209642,0.580066775656914,1.19317278382541,0.267096106940212,0,0,0.127612712494584,0.2023155617111,6.04299214086472,1.25924938732256,1.3940745403212,1.84820148105653,4.25844824253617,0.869932992075073,2.03856641014312,2.00374841438788,0,0,0.38126038784765,1.27948895655667,0,2.22742273548156,7.8494864019923,0.359744915166629,0.54907405947211,0.706874414074119,2.42618977887979,4.75530963519025,5.05510147486777,0.48763373908959,1.70599442741899,5.28250733783777,2.04749867111979,1.69686518344455,15.821136326834,3.30819206127675,2.65375590096488,2.19225442626881,1.15755106853338,1.9676842561399,1.01455188481352,1.54911749049875,3.94373843545138,0.430234056612155,0.491245205065606,1.426684205925,3.54761064070598,1.68886108238131,4.28083360847872,0.75894634753143,0.349934720244983,0,1.34060455107157,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0.47748896947538,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0,0,1.24415835064723,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.728341138602278,0,0,0,0.189559738885464,0,0,0,1.65495977937749,0.941798755221676,1.19472429772959,0.569219092059585,0,0,0.195984794828755,0.783532859223623,0,1.0319161948297,0.0967563312890851,0,0.328461828212837,0,0,0,2.19267079434801,0.397429223405979,0.063310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| |||
|short_description=p4@IGFBP6 | |||
}} |
Revision as of 13:41, 11 January 2014
Short description: | p4@IGFBP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IGFBP6_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000549628_5end |
EntrezGene: | IGFBP6 |
HGNC: | 5475 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.42e-29 | 58 |
myoblast | 2.42e-29 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-29 | 58 |
muscle cell | 8.11e-28 | 55 |
smooth muscle cell | 2.45e-26 | 43 |
smooth muscle myoblast | 2.45e-26 | 43 |
vascular associated smooth muscle cell | 5.69e-24 | 32 |
electrically responsive cell | 6.15e-24 | 61 |
electrically active cell | 6.15e-24 | 61 |
mesodermal cell | 6.94e-16 | 121 |
multi fate stem cell | 6.21e-11 | 427 |
somatic stem cell | 1.91e-10 | 433 |
stem cell | 8.06e-10 | 441 |
smooth muscle cell of the subclavian artery | 5.40e-09 | 5 |
cardiocyte | 9.07e-09 | 16 |
embryonic cell | 1.80e-08 | 250 |
fibroblast | 3.47e-07 | 76 |
aortic smooth muscle cell | 6.57e-07 | 10 |