FFCP PHASE1:Hg19::chr14:65409502..65409511,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4554 | |||
|TSSclassifier=strong | |||
|UniProt=P18283 | |||
|association_with_transcript=19bp_to_ENST00000389614,NM_002083,uc001xhy.1,uc010tsn.1_5end | |||
|description=CAGE_peak_3_at_GPX2_5end | |||
|id=chr14:65409502..65409511,- | |||
|ontology_enrichment_celltype=CL:0000223!3.05e-30!59;CL:0000066!8.06e-26!254;CL:0002076!2.72e-24!43;CL:0002368!2.33e-13!13;CL:0002251!1.40e-12!21;CL:0002202!2.18e-08!9;CL:0002632!2.18e-08!9;CL:0000244!3.38e-07!4;CL:0000731!3.38e-07!4;CL:0002159!6.41e-07!13;CL:0000082!8.92e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.72e-19;42!CL:0002368;7.05e-17;13!CL:0002251;4.30e-11;20!CL:0000244;3.88e-10;4!CL:0000731;3.88e-10;4!CL:0000182;1.06e-09;12!CL:0002202;1.30e-09;9!CL:0002632;1.30e-09;9!CL:0002621;9.98e-09;3!CL:0000307;2.96e-08;3!CL:0002328;3.07e-08;3!CL:0000312;7.17e-08;5!CL:0002159;1.37e-07;14!CL:0000082;2.60e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.94e-31,58;CL:0002076,4.56e-23,42;CL:0000066,5.95e-22,253;CL:0002368,8.53e-17,13;CL:0002251,3.99e-11,20;CL:0000244,4.34e-10,4;CL:0000731,4.34e-10,4;CL:0000182,1.14e-09,12;CL:0002202,1.49e-09,9;CL:0002632,1.49e-09,9;CL:0002621,1.05e-08,3;CL:0002328,3.27e-08,3;CL:0000068,3.43e-08,3;CL:0000069,3.43e-08,3;CL:0000307,3.43e-08,3;CL:0000377,3.43e-08,3;CL:0000312,7.88e-08,5;CL:0002159,1.45e-07,14;CL:0000082,2.79e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.13e-16;58!UBERON:0009497;1.07e-08;13!CL:0000377;2.96e-08;3!UBERON:0001041;5.56e-08;30!UBERON:0004161;1.04e-07;11!UBERON:0006595;1.17e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.32e-17!106;DOID:0050687!1.16e-11!143;DOID:1749!2.34e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.55e-11,106;DOID:0050687,2.74e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.41e-32!169;UBERON:0000925!7.41e-32!169;UBERON:0006595!7.41e-32!169;UBERON:0001007!1.65e-26!155;UBERON:0001555!1.65e-26!155;UBERON:0007026!1.65e-26!155;UBERON:0004921!1.20e-23!129;UBERON:0004185!1.20e-23!129;UBERON:0005911!4.75e-20!82;UBERON:0000077!2.34e-17!130;UBERON:0000466!4.21e-15!126;UBERON:0001041!3.84e-14!98;UBERON:0001004!6.42e-14!72;UBERON:0003929!1.14e-10!54;UBERON:0000464!1.50e-10!104;UBERON:0005153!1.90e-10!37;UBERON:0005178!7.68e-10!34;UBERON:0002224!7.68e-10!34;UBERON:0000065!1.07e-09!53;UBERON:0003101!1.32e-09!22;UBERON:0000079!1.32e-09!22;UBERON:0004807!1.98e-09!28;UBERON:0005181!2.00e-09!35;UBERON:0005177!2.35e-09!107;UBERON:0003135!5.87e-09!11;UBERON:0000344!8.19e-09!12;UBERON:0000161!1.01e-08!35;UBERON:0000473!4.05e-08!8;UBERON:0005409!4.49e-08!35;UBERON:0000365!5.30e-08!5;UBERON:0005157!5.67e-08!51;UBERON:0005156!1.28e-07!59;UBERON:0000990!1.28e-07!59;UBERON:0001048!1.51e-07!168;UBERON:0009497!2.71e-07!25;UBERON:0000015!2.71e-07!25;UBERON:0002423!2.71e-07!25;UBERON:0006235!2.71e-07!25;UBERON:0004161!2.71e-07!25;UBERON:0000160!3.07e-07!27;UBERON:0004802!8.92e-07!19;UBERON:0000115!8.92e-07!19;UBERON:0009854!9.57e-07!23;UBERON:0000072!9.62e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;6.52e-12;22!UBERON:0005911;1.58e-11;36!UBERON:0005178;2.48e-10;34!UBERON:0002224;2.48e-10;34!UBERON:0005181;2.58e-10;35!UBERON:0000486;1.61e-09;12!UBERON:0001949;9.98e-09;3!UBERON:0002423;1.97e-08;25!UBERON:0004815;3.07e-08;3!UBERON:0002031;3.07e-08;3!UBERON:0000365;4.19e-08;5!UBERON:0001555;1.51e-07;54!UBERON:0004921;1.51e-07;33!UBERON:0002107;1.66e-07;19!UBERON:0006925;1.66e-07;19!UBERON:0000065;1.86e-07;44!UBERON:0004802;2.60e-07;19!UBERON:0000115;2.60e-07;19!UBERON:0007196;2.62e-07;15!UBERON:0001558;2.62e-07;15!UBERON:0001007;5.60e-07;81!UBERON:0005910;9.55e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.06e-29,160;UBERON:0000925,1.06e-29,160;UBERON:0006595,1.06e-29,160;UBERON:0001007,1.11e-22,145;UBERON:0001555,1.11e-22,145;UBERON:0007026,1.11e-22,145;UBERON:0004921,4.77e-21,118;UBERON:0005911,5.77e-18,82;UBERON:0001041,3.20e-15,87;UBERON:0001004,4.47e-13,74;UBERON:0005178,2.85e-11,34;UBERON:0002224,2.85e-11,34;UBERON:0005181,7.51e-11,35;UBERON:0000065,3.82e-10,54;UBERON:0005177,5.97e-10,101;UBERON:0003929,2.56e-09,54;UBERON:0004807,8.77e-09,28;UBERON:0001949,1.05e-08,3;UBERON:0009497,1.95e-08,25;UBERON:0000015,1.95e-08,25;UBERON:0002423,1.95e-08,25;UBERON:0006235,1.95e-08,25;UBERON:0004161,1.95e-08,25;UBERON:0005153,2.60e-08,37;UBERON:0004815,3.27e-08,3;UBERON:0002031,3.27e-08,3;UBERON:0011216,3.38e-08,223;UBERON:0000365,4.56e-08,5;UBERON:0008835,5.51e-08,22;UBERON:0003894,5.51e-08,22;UBERON:0009854,1.47e-07,23;UBERON:0002107,1.75e-07,19;UBERON:0006925,1.75e-07,19;UBERON:0008836,1.75e-07,19;UBERON:0004802,2.79e-07,19;UBERON:0000115,2.79e-07,19;UBERON:0007196,2.79e-07,15;UBERON:0001558,2.79e-07,15;UBERON:0000072,3.80e-07,47;UBERON:0005157,5.79e-07,47;UBERON:0008947,6.42e-07,38;UBERON:0003258,6.42e-07,38;UBERON:0007499,8.22e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,7.228942050678,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,2.18577172975525,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66304265816484,5.18217629122586,8.60413786167011,0,0,0.348581828608555,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,19.6565443335525,11.2250082269467,0,0.983907508344908,0,2.08525542276389,2.24803506515239,5.93120937228622,0.925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,12.185398418281,0,2.69372684760534,1.07470227243418,0.871901815541886,6.9008882249738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,12.8324140994102,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14041339185858,2.69066094311149,1.14851441245126,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21310859268678,10.7248364085726,4.3556393944529,1.22386941009813,4.73555909938353,3.36942951335251,5.32116184244011,2.29723400206959,0,0,0,0,0,0,0,0,0,0,17.3978553346533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86565405061372,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0.251932747854276,0,0,0,0,8.95105873378046,0,2.46608514092334,0,0,0,0,0,0,0,0,36.1863165547889,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,3.98104772431402,1.23840590304675,1.22206028986725,0,0,0,0.134802265961354,0,0,0,9.00057247087613,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,12.0530648819685,0.0870592065804026,0.17472666824203,0,0,0,0,8.14707738502723,0,0.225980740780532,0,0,0,0.977756913674015,0,4.90941887900511,0,5.33134543470192,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,4.25429184459008,4.53287221096415,3.84200199968854,0,0,0,0,0,0,0.415440338029185,0,0,0,14.0882568791692,0.709251365692784,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5776264605685,0,0,0,10.0941234351754,26.7829708480335,0.320362237703084,0,0,0,0,0,0,0,0,0,0,8.79502939001312,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0,2.46365748638403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,2.48830904013189,0,0,0.157265941855896,0,0,0,0,0,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,8.63699922809025,11.9149420581218,0.917142992608395,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0.295712172434091,0,0,0,0,0,0,0,0,7.41022080309653,0,0,0,0,0,0,0,0,0,0.118193840883968,0,1.41287567130925,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,9.22612195983284,10.4849415484752,0,0,0,0,7.25212336732527,0.198950775161368,0,5.87319626602592,0,1.05673990496671,1.31196068783506,0.437119121007915,3.76253837089218,0.490296643507811,2.82811856521951,0,0,0,0,0,0,0,10.1775745005225,0,0.160482733378337,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,1.01988829741982,5.34434810531121,2.38926738790597,0.50141507858475,0.0757786982182394,0.267964130156178,0,0,1.27940389140589,0,0.0645889098360061,0.124149428591716,0,0,0,5.00748520163011,0,1.81850543139386,4.80538776130932,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p3@GPX2 | |||
}} |
Revision as of 20:36, 11 January 2014
Short description: | p3@GPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000389614, NM_002083, uc001xhy.1, uc010tsn.1_5end |
EntrezGene: | GPX2 |
HGNC: | 4554 |
UniProt: | P18283 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.94e-31 | 58 |
endo-epithelial cell | 4.56e-23 | 42 |
epithelial cell | 5.95e-22 | 253 |
respiratory epithelial cell | 8.53e-17 | 13 |
epithelial cell of alimentary canal | 3.99e-11 | 20 |
transitional epithelial cell | 4.34e-10 | 4 |
urothelial cell | 4.34e-10 | 4 |
hepatocyte | 1.14e-09 | 12 |
epithelial cell of tracheobronchial tree | 1.49e-09 | 9 |
epithelial cell of lower respiratory tract | 1.49e-09 | 9 |
gingival epithelial cell | 1.05e-08 | 3 |
bronchial epithelial cell | 3.27e-08 | 3 |
duct epithelial cell | 3.43e-08 | 3 |
branched duct epithelial cell | 3.43e-08 | 3 |
tracheal epithelial cell | 3.43e-08 | 3 |
tracheoblast | 3.43e-08 | 3 |
keratinocyte | 7.88e-08 | 5 |
general ecto-epithelial cell | 1.45e-07 | 14 |
epithelial cell of lung | 2.79e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.55e-11 | 106 |
cell type cancer | 2.74e-07 | 143 |