FFCP PHASE1:Hg19::chr14:71374136..71374193,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19740 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RV3,B2RTR6 | |||
|association_with_transcript=14bp_to_ENST00000238570,ENST00000304743,ENST00000554879,NM_014982,uc001xmn.3,uc001xmo.2,uc010are.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PCNX_5end | |||
|id=chr14:71374136..71374193,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.22e-17!42;CL:0000860!7.15e-15!45;CL:0000766!1.21e-13!76;CL:0000738!1.55e-12!140;CL:0002087!7.80e-11!119;CL:0000557!1.97e-10!71;CL:0002194!2.11e-10!63;CL:0000576!2.11e-10!63;CL:0000040!2.11e-10!63;CL:0000559!2.11e-10!63;CL:0002009!1.50e-09!65;CL:0000839!1.95e-09!70;CL:0002031!4.63e-09!124;CL:0000037!6.76e-07!172;CL:0000566!6.76e-07!172;CL:0000791!8.14e-07!18;CL:0000789!8.14e-07!18;CL:0002420!8.14e-07!18;CL:0002419!8.14e-07!18;CL:0000790!8.14e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.57e-17;33!CL:0002057;3.57e-17;33!CL:0000473;5.32e-14;39!CL:0000234;5.32e-14;39!CL:0000576;1.70e-09;48!CL:0000766;4.12e-08;69!CL:0000791;7.98e-07;18!CL:0000789;7.98e-07;18!CL:0002419;7.98e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.22e-17,42;CL:0002057,2.22e-17,42;CL:0000473,7.38e-17,48;CL:0000234,7.38e-17,48;CL:0000766,4.76e-15,72;CL:0000738,2.25e-13,136;CL:0002194,1.03e-11,59;CL:0000576,1.03e-11,59;CL:0000040,1.03e-11,59;CL:0000559,1.03e-11,59;CL:0002087,1.11e-11,115;CL:0000557,1.26e-11,67;CL:0002009,9.60e-11,61;CL:0000839,1.49e-10,66;CL:0002031,8.88e-10,120;CL:0000037,2.27e-07,168;CL:0000791,8.14e-07,18;CL:0000789,8.14e-07,18;CL:0002420,8.14e-07,18;CL:0002419,8.14e-07,18;CL:0000790,8.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-13;42!CL:0000790;7.98e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-20!115;UBERON:0002390!1.63e-12!102;UBERON:0003061!1.63e-12!102;UBERON:0002193!7.39e-11!112;UBERON:0002346!5.80e-10!90;UBERON:0001049!2.94e-09!57;UBERON:0005068!2.94e-09!57;UBERON:0006241!2.94e-09!57;UBERON:0007135!2.94e-09!57;UBERON:0003080!9.11e-09!42;UBERON:0003075!9.26e-09!86;UBERON:0007284!9.26e-09!86;UBERON:0002616!2.15e-08!59;UBERON:0002780!2.35e-08!41;UBERON:0001890!2.35e-08!41;UBERON:0006240!2.35e-08!41;UBERON:0002371!1.65e-07!80;UBERON:0001474!4.22e-07!86;UBERON:0001893!4.39e-07!34;UBERON:0003056!4.80e-07!61;UBERON:0002020!6.15e-07!34;UBERON:0003528!6.15e-07!34;UBERON:0002791!7.10e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-20,114;UBERON:0002390,1.45e-13,98;UBERON:0003061,1.45e-13,98;UBERON:0002193,9.69e-12,108;UBERON:0002346,5.31e-09,86;UBERON:0001049,7.17e-09,56;UBERON:0005068,7.17e-09,56;UBERON:0006241,7.17e-09,56;UBERON:0007135,7.17e-09,56;UBERON:0000073,1.23e-08,53;UBERON:0002616,1.23e-08,53;UBERON:0002780,2.35e-08,41;UBERON:0001890,2.35e-08,41;UBERON:0003080,2.35e-08,41;UBERON:0006240,2.35e-08,41;UBERON:0002371,2.38e-08,76;UBERON:0002405,4.26e-08,93;UBERON:0001474,7.25e-08,82;UBERON:0003075,7.75e-08,82;UBERON:0007284,7.75e-08,82;UBERON:0001893,4.39e-07,34;UBERON:0003528,6.15e-07,34;UBERON:0002020,6.15e-07,34 | |||
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2 | |||
|short_description=p1@PCNX | |||
}} |
Revision as of 20:51, 11 January 2014
Short description: | p1@PCNX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCNX_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 14bp_to_ENST00000238570, ENST00000304743, ENST00000554879, NM_014982, uc001xmn.3, uc001xmo.2, uc010are.1_5end |
EntrezGene: | PCNX |
HGNC: | 19740 |
UniProt: | Q96RV3B2RTR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.22e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-17 | 42 |
defensive cell | 7.38e-17 | 48 |
phagocyte | 7.38e-17 | 48 |
myeloid leukocyte | 4.76e-15 | 72 |
leukocyte | 2.25e-13 | 136 |
monopoietic cell | 1.03e-11 | 59 |
monocyte | 1.03e-11 | 59 |
monoblast | 1.03e-11 | 59 |
promonocyte | 1.03e-11 | 59 |
nongranular leukocyte | 1.11e-11 | 115 |
granulocyte monocyte progenitor cell | 1.26e-11 | 67 |
macrophage dendritic cell progenitor | 9.60e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-10 | 66 |
hematopoietic lineage restricted progenitor cell | 8.88e-10 | 120 |
hematopoietic stem cell | 2.27e-07 | 168 |
mature alpha-beta T cell | 8.14e-07 | 18 |
alpha-beta T cell | 8.14e-07 | 18 |
immature T cell | 8.14e-07 | 18 |
mature T cell | 8.14e-07 | 18 |
immature alpha-beta T cell | 8.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-20 | 114 |
hematopoietic system | 1.45e-13 | 98 |
blood island | 1.45e-13 | 98 |
hemolymphoid system | 9.69e-12 | 108 |
neurectoderm | 5.31e-09 | 86 |
neural tube | 7.17e-09 | 56 |
neural rod | 7.17e-09 | 56 |
future spinal cord | 7.17e-09 | 56 |
neural keel | 7.17e-09 | 56 |
regional part of nervous system | 1.23e-08 | 53 |
regional part of brain | 1.23e-08 | 53 |
regional part of forebrain | 2.35e-08 | 41 |
forebrain | 2.35e-08 | 41 |
anterior neural tube | 2.35e-08 | 41 |
future forebrain | 2.35e-08 | 41 |
bone marrow | 2.38e-08 | 76 |
immune system | 4.26e-08 | 93 |
bone element | 7.25e-08 | 82 |
neural plate | 7.75e-08 | 82 |
presumptive neural plate | 7.75e-08 | 82 |
telencephalon | 4.39e-07 | 34 |
brain grey matter | 6.15e-07 | 34 |
gray matter | 6.15e-07 | 34 |