FFCP PHASE1:Hg19::chr17:3867722..3867748,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=489 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=813 | |||
|TSSclassifier=strong | |||
|UniProt=Q93084,G3XAE1,E9PFL6,F8WC06 | |||
|association_with_transcript=0bp_to_ENST00000309890,ENST00000352011,ENST00000359983,ENST00000397035,ENST00000397039,ENST00000397041,ENST00000397043,ENST00000397045,uc002fwx.1,uc002fwy.1,uc002fwz.1,uc002fxa.1,uc002fxb.1,uc002fxc.1,uc002fxd.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ATP2A3_5end | |||
|id=chr17:3867722..3867748,- | |||
|ontology_enrichment_celltype=CL:0000037!1.17e-62!172;CL:0000566!1.17e-62!172;CL:0002032!4.51e-58!165;CL:0000837!4.51e-58!165;CL:0000988!1.63e-57!182;CL:0000738!3.85e-48!140;CL:0002031!3.48e-40!124;CL:0002087!7.04e-40!119;CL:0000763!1.16e-31!112;CL:0000049!1.16e-31!112;CL:0000542!9.29e-24!53;CL:0000051!9.29e-24!53;CL:0000838!2.50e-23!52;CL:0000766!3.71e-21!76;CL:0000557!3.07e-17!71;CL:0000839!3.36e-17!70;CL:0002194!6.77e-15!63;CL:0000576!6.77e-15!63;CL:0000040!6.77e-15!63;CL:0000559!6.77e-15!63;CL:0002009!1.12e-14!65;CL:0002057!1.43e-13!42;CL:0000860!2.53e-12!45;CL:0000945!2.92e-12!24;CL:0000826!2.92e-12!24;CL:0000084!1.03e-10!25;CL:0000827!1.03e-10!25;CL:0000134!1.57e-09!358;CL:0000236!1.81e-09!14;CL:0000791!2.06e-09!18;CL:0000789!2.06e-09!18;CL:0002420!2.06e-09!18;CL:0002419!2.06e-09!18;CL:0000790!2.06e-09!18;CL:0002320!1.73e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.74e-17;53!CL:0000945;3.44e-14;24!CL:0002087;1.98e-13;104!CL:0000860;5.09e-13;33!CL:0002057;5.09e-13;33!CL:0000084;1.34e-12;25!CL:0000763;2.30e-12;100!CL:0000738;2.61e-12;136!CL:0000473;3.59e-12;39!CL:0000234;3.59e-12;39!CL:0000988;1.52e-11;177!CL:0000236;7.76e-11;13!CL:0000791;8.38e-11;18!CL:0000789;8.38e-11;18!CL:0002419;8.38e-11;18!CL:0000766;8.55e-11;69!CL:0000576;1.03e-10;48!CL:0000625;5.23e-07;11!CL:0000094;6.53e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.41e-74,168;CL:0000988,1.42e-69,177;CL:0002032,1.43e-68,161;CL:0000837,1.43e-68,161;CL:0000738,6.68e-57,136;CL:0002087,5.04e-49,115;CL:0002031,4.45e-48,120;CL:0000763,3.93e-37,108;CL:0000049,3.93e-37,108;CL:0000542,5.43e-28,53;CL:0000051,5.43e-28,53;CL:0000838,1.75e-27,52;CL:0000766,2.03e-26,72;CL:0000839,1.44e-21,66;CL:0000557,1.43e-20,67;CL:0002194,8.45e-19,59;CL:0000576,8.45e-19,59;CL:0000040,8.45e-19,59;CL:0000559,8.45e-19,59;CL:0002009,1.70e-17,61;CL:0000473,3.58e-17,48;CL:0000234,3.58e-17,48;CL:0000860,1.05e-15,42;CL:0002057,1.05e-15,42;CL:0000945,3.65e-14,24;CL:0000826,3.65e-14,24;CL:0000134,5.25e-14,354;CL:0002320,1.06e-12,361;CL:0000084,1.36e-12,25;CL:0000827,1.36e-12,25;CL:0000236,7.10e-11,14;CL:0000791,8.27e-11,18;CL:0000789,8.27e-11,18;CL:0002420,8.27e-11,18;CL:0002419,8.27e-11,18;CL:0000790,8.27e-11,18;CL:0000219,1.52e-09,386;CL:0000625,5.27e-07,11;CL:0000094,6.61e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;9.74e-17;53!CL:0002057;1.19e-11;42!CL:0000049;5.30e-11;108!CL:0000790;8.38e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!7.80e-16!51;DOID:0060083!7.80e-16!51;DOID:1240!6.45e-15!39;DOID:8692!2.00e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.69e-13;39!DOID:8692;8.76e-13;31!DOID:2531;1.10e-11;51!DOID:0060083;1.10e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.56e-18,51;DOID:0060083,1.56e-18,51;DOID:1240,2.71e-17,39;DOID:8692,3.51e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.01e-24!102;UBERON:0003061!4.01e-24!102;UBERON:0002193!5.70e-20!112;UBERON:0002371!9.37e-15!80;UBERON:0001474!1.62e-12!86;UBERON:0007023!4.69e-11!115;UBERON:0004765!1.64e-09!101;UBERON:0001434!1.64e-09!101;UBERON:0002405!2.11e-09!115;UBERON:0000178!3.80e-08!15;UBERON:0000179!3.80e-08!15;UBERON:0000463!3.80e-08!15;UBERON:0002384!1.39e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-09;15!UBERON:0000179;2.51e-09;15!UBERON:0000463;2.51e-09;15!UBERON:0002390;4.55e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.06e-29,98;UBERON:0003061,3.06e-29,98;UBERON:0002193,1.56e-25,108;UBERON:0002405,3.30e-18,93;UBERON:0002371,5.83e-18,76;UBERON:0001474,6.05e-15,82;UBERON:0004765,1.10e-11,90;UBERON:0002384,3.07e-11,371;UBERON:0001434,2.19e-09,100;UBERON:0000178,2.55e-09,15;UBERON:0000179,2.55e-09,15;UBERON:0000463,2.55e-09,15;UBERON:0003081,6.96e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,5.6518805395347,1.39560233594486,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,12.4553851369161,11.8224848807922,12.6724357915024,36.1895134700992,22.6459344877355,29.5698795533705,0,0,0,89.3196822690878,37.3905081441919,37.2872557955256,16.6198622559563,25.0680559337677,32.3346197366619,3.58264758783879,5.18229865630367,3.34848237924443,52.6341624382024,41.1884778620802,35.4172729334212,44.3939460489858,32.8934310417461,19.8212077372866,17.8369283239733,18.1874101635661,8.0403958162119,33.0955853507154,21.3009945582663,16.251178391321,64.1906377840282,47.2127639600073,20.8992840533929,58.1559395504715,38.8324122762073,49.8682958123252,15.8328624089624,18.1511928435685,12.7867425159808,20.3146467040009,18.7237124148076,18.0618452208717,26.6323585172148,18.251902144707,11.9453864587814,28.4537766237683,19.5187147073409,10.7597211729901,5.70389273042243,5.31510749912609,2.72556239160889,16.6246374096813,12.3145052130035,5.46466994770072,3.70516566863623,2.38700012638908,2.00930569141097,79.1983100075952,86.2899005794168,90.7299438940826,101.988523193395,92.0910770182829,83.9138562333546,103.784045027223,83.956730399112,130.918982895173,153.856143615186,137.236088896957,59.4770978605616,25.2228853341691,38.4540763771613,35.40775862049,54.6284960221339,56.7460137238645,42.2981833338416,31.9403821300919,16.0972253949809,33.1205438293449,53.6998402186537,45.6639156585998,32.7870163983759,24.6431516026164,58.6658244343592,63.9891989994601,68.2417304105256,65.4949542152461,53.0339646895146,52.1968702330453,41.4688283539055,49.1316961883391,56.5413620060855,42.9206952834152,35.7372543301935,25.3019692019503,35.3607609899747,32.5541726928209,35.1667256445898,21.5322420281215,23.0375900077953,24.9861453104692,40.9624646036149,27.0972238983945,55.2402476435767,67.6623695332273,63.433088900666,0,10.7312137552582,0.511450247374121,0,0,0.144846518960824,0,0,0,0,0.527008714158756,5.04269440666194,0,0,38.6211398449073,44.9254722232109,42.413589405518,93.9653059763047,68.0673943828352,56.4615402020939,0,0,0,0.56530794192401,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,193.717213631013,139.600895093397,0,0,0,0,0,1.77334191099179,0.560677600142307,5.33744978648525,0.74000264525148,0,0.134710672069688,0,0,0,0,0.312160076830321,0,3.58676833324323,0,0,0,3.26646674007829,0.368502951935304,9.19599452464312,5.94001428641027,4.45080472701402,0,0,0.168336113954066,0.375355559615893,1.10825646193673,0,0,16.2257103619125,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,2.07355300420312,1.85541675650079,3.137236457477,1.45125477021519,1.51392510525377,1.09493207722749,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,1.26755034821831,0,1.77236972004421,109.041385555419,3.32068784066407,0,0,0,0,0,1.62904152655162,0,0,0,0.352226082707465,0,0,0,41.8808330918416,46.3582527531231,7.87894419479671,12.8702345826581,19.9165757466896,0,0,0,0,0,0,12.8092441852945,70.7028925126205,38.7703576061244,34.4446688666538,39.7663665293097,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,1.03417372606222,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,8.51366464488333,5.02257091432126,12.6500363689819,0,0,0,1.15825045334063,8.01357657946495,1.43248770591916,35.082650069974,51.8190899331069,49.594342217689,58.5244245435653,0.254094624222463,0,0,0,0,141.562327526017,260.270469507502,148.775169323537,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,33.4964202319078,52.2028365981053,53.4705064595256,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.532685175939381,0,4.15403543346897,0,5.19695633243976,0,0,0.459257792658427,0.364182336013434,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,3.50815802633495,6.27445082459761,0,0,0.650756789328606,1.54561517471583,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0,0,0,0,0,0.255679882248303,0.178064071293475,0,0,0,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.707027159768564,1.13008116620243,0,0,0,0,0,0.202910376962704,3.40805847909725,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0.670302275535787,0,1.7887322147588,0,0,0,0,54.8043417970743,55.8185161213934,124.183086803967,83.3811214102261,76.9247450671183,50.580918273032,37.802200606668,125.313777854495,0,0,0,34.7451937485094,24.3814969930192,126.632481160177,55.1614903641725,22.7520483433411,37.7265579160762,30.2693223295152,27.9174868636118,45.4891428543803,26.4752227678503,23.1886245744074,47.6205506471128,47.5709895622505,18.146452486718,13.9241797961823,17.8855419829937,35.037545165088,4.60861146462687,4.02616994206349,4.0043794010858,22.8604071620387,11.6930593036002,6.15436994738562,67.6139196189958,62.6175299835902,45.1158416281118,0.18714054040822,1.75809815126273,0,11.5901119648577,0,0.23874448473769,1.18785872333055,0,0,0.703347082052564,0.222617410045812,0,0,27.4962223786476,77.3594963487214,196.255610578481,0.20453736500431,30.7712013652674,0,0,1.25314822272926,26.0901908815705,6.70775158331149,57.4759421632656,0,0,0.649376687132959,0,22.6572152144153,1.66173999992772,0.724999575434793,0.455173793141999,2.54253650292766,1.41832609060762,1.03423011972439,0.583209226766509,0.868124974666461,0.885741385813839,0.60298219312704,4.5774520895125,14.0435660112655,20.9838809457019,2.4132393686937,0,0.975966209950223,3.61666214967846,0.227884111694002,0,0,0.651884231532048,0.638002319463839,0,0,107.302963105523,34.6926366633005,17.6184382814166,14.2125266188824,17.2535030199611,19.9707688501253,3.03605972358696,33.8534913228207,0,0,1.13082457147153,0,53.7441442782393,20.2567822712647,23.2191455074778,2.37216902944498,4.07760998523459,6.89184866736005,2.49384192028505,9.63093176758547,0.702793337176017,31.0173141666632,0.586993856796269,0.485560759068186,93.9110878781549,41.1368434565457,0.30607276163049,6.8241505998767,0,0.103688191397247,0,0,0.627865836814451,0,0,1.52542140314453,0,0,0,4.36816670605075,0,0.19351266257817,0.0730893170861856,0.164230914106418,7.17718722014304,0,4.51961481561065,0,0.19871461170299,0.886351143382302,1.95551382734803,0.240476460754601,31.1641372319455,0.39961921916426,5.47543585185603,0.458146384663663,0.343189995723929,0,0.49701014226173,0.942776138467182,1.08723364858891,0.523014231561666,0,0,0,1.23214841002794,83.035282243532,0,26.5516227822108,7.54062483435086,4.58320848023367,2.87149209830726,2.99518500748487,1.71690419254628,3.79391477651183,3.42635709682304,0.360299883542404,0,0,0,0,0.0984274815147488,9.14471986310472,0,0.681017030557878,3.05430982083536,3.02586760513914,2.07720169014593,0.674921674654501,0.77380195455795,1.09349201984444,0,4.1767024868575,3.04236611182989,0,3.76503412598974,0.191915197319445,4.2881719582402,1.32418394073086,0,0,0,0,3.59190574687462,59.3528925017721,0.170388021785422,0.453248366080503,0.879313402068495,7.95041333473328,0.775697738169303,0.92562821219883,0.171086837884329,0,10.0380167813633,1.10043013569766,12.4271716604159,33.2431234614007,31.815472735569,29.3520162097959,0,0,0.2506898940227,0.306345576763462,0,0.628216385000937,0,0.122026264901963,0.751145584238999,1.72022758707021,1.99672292766334,2.11127770000704,0,0,0,0.856396000634902,3.99951893486892,0,1.88397337194073,0.149254802886874,0.701139929541673,0,0,0.50313580350515,4.44905610798268,0.915360273587694,0.151230923763239,1.24349760466224,0,2.07085797312813,11.2450778040901,2.48420731002015,0,0.53168342911599,3.65221543268214,0,0,1.22061219961398,13.2749521217868,0.537052785212442,16.7052153556258,16.3219314366433,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0,0.176689145945881,0,0.168942440653073,0,0,0,0.414775308455192,0.194860308839388,1.0629187225069,0.163565394255844,0.982829546539238,0,0,3.39978572953381,15.5769925353446,20.4935825796371,0,0,0.139879507719444,1.86623178009892,0,0.323474434190045,0,0,1.01839517972415,0,0.743614585554013,0,0,15.6934872552494,15.2108442174239,0,0.6124909547064,0.578063025868136,0,0.478901577171454,0,0.504143392443436,0.899044282034833,0.968853873791107,1.42769420259154,0.196295437002051,0.235939446695481,0,0,0,0,0.397832444232549,3.00841313397029,0,28.1345044043913,0,0,3.69640215542613,0.742913430802341,0.781078098613847,0.826747186004736,0.824405532520789,0,247.812510619446,19.3522359571825,0,0.383287282918786,0,0.672567444437648,0,0.455324382702595,1.95145214357805,7.14450722845831,0,1.01954599465248,0.789273282754189,0.236387681767936,0.111231401892069,5.80848887093804,0.628462359664008,0.280272163313789,10.0447459256045,0,0,16.1536989839243,0,0,0.347716544605159,0.801711364730253,0.414432328326074,0,0,108.84752178153,0,0,92.7217639918135,1.14553434272025,0.31020638566432,0,0,0,7.68082927388297,0,0.821302454849976,2.3196288626764,7.77137588894623,5.84848658655264,47.1513337132443,0.118920090777569,0.11294608203896,0.439762066981716,21.1347980993343,19.9109327918497,12.4578949487256,63.0225177124441,4.16752146981639,48.5493687029349,0.392616934229891,1.48523200163543,1.2679671827502,0.169927114687817,32.4244517030495,42.1554587347195,5.99646935549574,2.14264726326789,0,0.240724100067505,16.0674005414234,149.087017106476,1.72007499781742,0.315543124386369,2.17572768610927,0.436350690340377,38.6189593576242,0,0,0,0,0.546327859818478,0,8.26109520910052,3.20660886318673,3.85958578046349,2.005660314339,2.8795905322931,0.803892390468535,0.829169439458779,1.24119595034274,43.7129662897011,9.9987061214771,119.424894286775,102.485353302461,0,1.84576759006678,3.43599221228973,10.2326871511572,10.2669990325584,83.9880101091906,53.6482096337219,58.5482227520984,0.162806537221949,0,0,1.70667884002515,7.03922827210363,4.64517487894893,2.44137706989443,1.33151354837103,66.2190780914476,13.1433081844326 | |||
|short_description=p1@ATP2A3 | |||
}} |
Revision as of 13:10, 20 January 2014
Short description: | p1@ATP2A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP2A3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000309890, ENST00000352011, ENST00000359983, ENST00000397035, ENST00000397039, ENST00000397041, ENST00000397043, ENST00000397045, uc002fwx.1, uc002fwy.1, uc002fwz.1, uc002fxa.1, uc002fxb.1, uc002fxc.1, uc002fxd.1_5end |
EntrezGene: | ATP2A3 |
HGNC: | 813 |
UniProt: | Q93084G3XAE1E9PFL6F8WC06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.06e-29 | 98 |
blood island | 3.06e-29 | 98 |
hemolymphoid system | 1.56e-25 | 108 |
immune system | 3.30e-18 | 93 |
bone marrow | 5.83e-18 | 76 |
bone element | 6.05e-15 | 82 |
skeletal element | 1.10e-11 | 90 |
connective tissue | 3.07e-11 | 371 |
skeletal system | 2.19e-09 | 100 |
blood | 2.55e-09 | 15 |
haemolymphatic fluid | 2.55e-09 | 15 |
organism substance | 2.55e-09 | 15 |
lateral plate mesoderm | 6.96e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.56e-18 | 51 |
immune system cancer | 1.56e-18 | 51 |
leukemia | 2.71e-17 | 39 |
myeloid leukemia | 3.51e-13 | 31 |