FFCP PHASE1:Hg19::chr17:43502987..43503004,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31813 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000376922_5end | |||
|coexpression_cluster_id=C3642 | |||
|description=CAGE_peak_2_at_ARHGAP27_5end | |||
|id=chr17:43502987..43503004,- | |||
|ontology_enrichment_celltype=CL:0000066!1.68e-27!254;CL:0000223!7.24e-14!59;CL:0002076!1.31e-12!43;CL:0002251!5.11e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;2.07e-08;20!CL:0002076;2.77e-08;42!CL:0000453;4.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-23,253;CL:0000223,6.01e-13,58;CL:0002076,8.43e-11,42;CL:0002251,2.07e-08,20;CL:0000453,4.71e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.59e-11;86!UBERON:0003918;7.34e-10;10!UBERON:0007687;7.34e-10;10!UBERON:0008947;1.32e-09;29!UBERON:0003104;2.07e-09;31 | |||
|ontology_enrichment_disease=DOID:305!9.61e-37!106;DOID:0050687!9.93e-30!143;DOID:162!3.41e-17!235;DOID:14566!3.33e-16!239;DOID:299!4.11e-11!25;DOID:1749!4.39e-10!14;DOID:7!2.56e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.49e-14;14!DOID:305;1.66e-11;106!DOID:299;6.74e-11;25!DOID:0050687;1.63e-07;143!DOID:7;1.94e-07;39!DOID:3119;2.25e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.29e-40,106;DOID:0050687,1.35e-31,143;DOID:162,1.43e-15,235;DOID:14566,1.13e-14,239;DOID:1749,8.80e-14,14;DOID:299,7.03e-11,25;DOID:7,3.00e-09,39;DOID:3119,2.41e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.31e-26!169;UBERON:0000925!3.31e-26!169;UBERON:0006595!3.31e-26!169;UBERON:0001007!4.49e-24!155;UBERON:0001555!4.49e-24!155;UBERON:0007026!4.49e-24!155;UBERON:0004921!5.20e-24!129;UBERON:0004185!5.20e-24!129;UBERON:0000077!2.95e-20!130;UBERON:0001041!4.01e-17!98;UBERON:0000062!2.73e-15!511;UBERON:0005177!5.04e-15!107;UBERON:0005409!9.92e-14!35;UBERON:0000464!4.45e-13!104;UBERON:0001004!6.06e-13!72;UBERON:0000466!1.96e-12!126;UBERON:0008947!1.27e-10!38;UBERON:0003258!1.27e-10!38;UBERON:0000065!1.45e-10!53;UBERON:0000160!2.25e-10!27;UBERON:0005911!2.66e-10!82;UBERON:0001008!4.03e-10!45;UBERON:0006554!6.01e-10!44;UBERON:0000072!5.35e-09!46;UBERON:0002075!1.36e-08!18;UBERON:0009569!1.61e-08!113;UBERON:0003104!2.96e-08!238;UBERON:0009142!2.96e-08!238;UBERON:0000064!3.02e-08!219;UBERON:0005157!5.41e-08!51;UBERON:0005153!6.33e-08!37;UBERON:0001048!7.58e-08!168;UBERON:0002113!1.18e-07!27;UBERON:0003918!1.18e-07!27;UBERON:0005095!1.18e-07!27;UBERON:0007687!1.18e-07!27;UBERON:0002108!1.20e-07!14;UBERON:0002048!1.54e-07!22;UBERON:0000117!1.54e-07!22;UBERON:0000171!1.54e-07!22;UBERON:0000170!1.54e-07!22;UBERON:0005597!1.54e-07!22;UBERON:0000118!1.54e-07!22;UBERON:0000481!1.76e-07!347;UBERON:0002553!2.39e-07!70;UBERON:0005181!2.96e-07!35;UBERON:0005178!4.66e-07!34;UBERON:0002224!4.66e-07!34;UBERON:0000489!6.86e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.25e-14;33!UBERON:0005409;6.18e-14;22!UBERON:0002075;4.74e-10;18!UBERON:0006554;6.15e-10;30!UBERON:0001008;6.15e-10;30!UBERON:0000160;1.11e-09;17!UBERON:0002113;8.63e-09;24!UBERON:0011143;8.63e-09;24!UBERON:0000489;2.07e-08;29!UBERON:0001555;1.06e-07;54!UBERON:0001264;1.27e-07;10!UBERON:0000072;3.08e-07;37!UBERON:0001041;4.79e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.95e-23,118;UBERON:0004119,6.53e-23,160;UBERON:0000925,6.53e-23,160;UBERON:0006595,6.53e-23,160;UBERON:0001007,1.07e-22,145;UBERON:0001555,1.07e-22,145;UBERON:0007026,1.07e-22,145;UBERON:0005177,5.41e-18,101;UBERON:0001041,1.59e-13,87;UBERON:0005409,1.21e-12,25;UBERON:0006554,1.63e-12,47;UBERON:0001008,4.72e-12,48;UBERON:0001004,7.43e-11,74;UBERON:0002113,1.98e-10,26;UBERON:0003918,1.98e-10,26;UBERON:0011143,1.98e-10,26;UBERON:0005095,1.98e-10,26;UBERON:0007687,1.98e-10,26;UBERON:0002075,4.71e-10,18;UBERON:0000489,6.73e-10,31;UBERON:0008947,7.34e-10,38;UBERON:0003258,7.34e-10,38;UBERON:0000160,1.14e-09,17;UBERON:0003103,2.05e-09,68;UBERON:0005911,3.64e-09,82;UBERON:0009569,8.09e-09,112;UBERON:0000065,1.31e-08,54;UBERON:0000072,1.63e-08,47;UBERON:0005172,5.63e-08,54;UBERON:0005173,5.63e-08,54;UBERON:0001264,8.03e-08,10;UBERON:0000161,1.91e-07,36 | |||
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| |||
|short_description=p2@ARHGAP27 | |||
}} |
Revision as of 15:51, 20 January 2014
Short description: | p2@ARHGAP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP27_5end |
Coexpression cluster: | C3642_colon_small_signet_choriocarcinoma_pancreatic_rectal_immature |
Association with transcript: | 0bp_to_ENST00000376922_5end |
EntrezGene: | ARHGAP27 |
HGNC: | 31813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-23 | 253 |
endodermal cell | 6.01e-13 | 58 |
endo-epithelial cell | 8.43e-11 | 42 |
epithelial cell of alimentary canal | 2.07e-08 | 20 |
Langerhans cell | 4.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.95e-23 | 118 |
endoderm-derived structure | 6.53e-23 | 160 |
endoderm | 6.53e-23 | 160 |
presumptive endoderm | 6.53e-23 | 160 |
digestive system | 1.07e-22 | 145 |
digestive tract | 1.07e-22 | 145 |
primitive gut | 1.07e-22 | 145 |
trunk region element | 5.41e-18 | 101 |
foregut | 1.59e-13 | 87 |
gastrointestinal system | 1.21e-12 | 25 |
urinary system structure | 1.63e-12 | 47 |
renal system | 4.72e-12 | 48 |
respiratory system | 7.43e-11 | 74 |
kidney | 1.98e-10 | 26 |
kidney mesenchyme | 1.98e-10 | 26 |
upper urinary tract | 1.98e-10 | 26 |
kidney rudiment | 1.98e-10 | 26 |
kidney field | 1.98e-10 | 26 |
viscus | 4.71e-10 | 18 |
cavitated compound organ | 6.73e-10 | 31 |
respiratory primordium | 7.34e-10 | 38 |
endoderm of foregut | 7.34e-10 | 38 |
intestine | 1.14e-09 | 17 |
compound organ | 2.05e-09 | 68 |
endo-epithelium | 3.64e-09 | 82 |
subdivision of trunk | 8.09e-09 | 112 |
respiratory tract | 1.31e-08 | 54 |
segment of respiratory tract | 1.63e-08 | 47 |
abdomen element | 5.63e-08 | 54 |
abdominal segment element | 5.63e-08 | 54 |
pancreas | 8.03e-08 | 10 |
orifice | 1.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.29e-40 | 106 |
cell type cancer | 1.35e-31 | 143 |
cancer | 1.43e-15 | 235 |
disease of cellular proliferation | 1.13e-14 | 239 |
squamous cell carcinoma | 8.80e-14 | 14 |
adenocarcinoma | 7.03e-11 | 25 |
disease of anatomical entity | 3.00e-09 | 39 |
gastrointestinal system cancer | 2.41e-07 | 14 |