FFCP PHASE1:Hg19::chr17:46627597..46627646,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:46627597..46627646,+ | |||
|id=chr17:46627597..46627646,+ | |||
|ontology_enrichment_celltype=CL:1000449!3.08e-14!16;CL:0000183!5.73e-14!59;CL:1000507!2.80e-13!12;CL:1000494!2.80e-13!12;CL:1000497!2.40e-12!18;CL:0002518!2.40e-12!18;CL:0000055!4.74e-12!180;CL:0002681!6.47e-12!13;CL:0002584!6.47e-12!13;CL:0002334!2.48e-11!12;CL:0000187!2.16e-10!54;CL:0000680!1.44e-09!57;CL:0000056!1.44e-09!57;CL:0000355!1.44e-09!57;CL:0000192!2.17e-09!42;CL:0000514!2.17e-09!42;CL:0000057!6.70e-09!75;CL:0002551!6.94e-09!6;CL:0000393!7.87e-09!60;CL:0000211!7.87e-09!60;CL:0002539!8.01e-08!10;CL:0002603!4.56e-07!3;CL:0002504!8.25e-07!3;CL:0002564!8.25e-07!3;CL:1000279!8.25e-07!3;CL:1000280!8.25e-07!3;CL:0000669!9.18e-07!5;CL:0002582!9.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.68e-18;10!CL:1000494;4.68e-18;10!CL:1000449;6.37e-16;15!CL:1000497;6.05e-14;17!CL:0002518;6.05e-14;17!CL:0002539;5.04e-13;10!CL:0002561;4.49e-12;2!CL:0002554;4.87e-12;2!CL:0002600;4.87e-12;2!CL:0002598;1.24e-11;2!CL:0002195;4.47e-11;2!CL:0002571;4.47e-11;2!CL:0002681;1.77e-10;12!CL:0002584;1.77e-10;12!CL:0002559;3.11e-10;5!CL:0000192;4.88e-10;43!CL:0002551;4.03e-08;6!CL:0000239;6.64e-08;3!CL:1000615;6.64e-08;3!CL:0002306;6.64e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.12e-18,10;CL:1000494,8.12e-18,10;CL:1000449,1.18e-15,15;CL:1000497,1.04e-13,17;CL:0002518,1.04e-13,17;CL:0002539,3.59e-13,10;CL:0000192,1.11e-12,43;CL:0000514,1.11e-12,43;CL:0002554,4.16e-12,2;CL:0002600,4.16e-12,2;CL:0002561,4.63e-12,2;CL:0002598,1.42e-11,2;CL:0002195,2.28e-11,2;CL:0002571,2.28e-11,2;CL:0002681,2.39e-10,12;CL:0002584,2.39e-10,12;CL:0002559,2.93e-10,5;CL:0000187,1.89e-09,55;CL:0000680,7.46e-09,58;CL:0000056,7.46e-09,58;CL:0000355,7.46e-09,58;CL:0000393,2.57e-08,61;CL:0000211,2.57e-08,61;CL:0002551,4.19e-08,6;CL:0000239,7.14e-08,3;CL:1000615,7.14e-08,3;CL:0002306,7.14e-08,3;CL:0000222,1.34e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.00e-17!216;UBERON:0005256!1.08e-17!143;UBERON:0004290!1.34e-14!70;UBERON:0004211!3.08e-14!16;UBERON:0001285!3.08e-14!16;UBERON:0007684!3.08e-14!16;UBERON:0003220!3.08e-14!16;UBERON:0004208!3.08e-14!16;UBERON:0000914!2.59e-13!83;UBERON:0002329!2.59e-13!83;UBERON:0003077!2.59e-13!83;UBERON:0003059!2.59e-13!83;UBERON:0007282!2.59e-13!83;UBERON:0009618!2.59e-13!83;UBERON:0007285!2.59e-13!83;UBERON:0009773!2.80e-13!12;UBERON:0001231!2.80e-13!12;UBERON:0004810!2.80e-13!12;UBERON:0006555!3.10e-13!17;UBERON:0005103!3.10e-13!17;UBERON:0000083!3.10e-13!17;UBERON:0009201!3.10e-13!17;UBERON:0004819!3.10e-13!17;UBERON:0006553!3.10e-13!17;UBERON:0003074!3.10e-13!17;UBERON:0003060!3.10e-13!17;UBERON:0003104!1.77e-12!238;UBERON:0009142!1.77e-12!238;UBERON:0000080!2.40e-12!18;UBERON:0002120!2.40e-12!18;UBERON:0004875!2.40e-12!18;UBERON:0005721!2.40e-12!18;UBERON:0005754!2.40e-12!18;UBERON:0007297!2.40e-12!18;UBERON:0001225!6.47e-12!13;UBERON:0008987!6.47e-12!13;UBERON:0000486!2.29e-11!82;UBERON:0000058!4.49e-11!26;UBERON:0002067!6.22e-11!9;UBERON:0004016!6.22e-11!9;UBERON:0010083!6.22e-11!9;UBERON:0000353!6.60e-11!17;UBERON:0009569!7.25e-11!113;UBERON:0004876!7.71e-11!20;UBERON:0001135!1.90e-10!15;UBERON:0002113!2.47e-10!27;UBERON:0003918!2.47e-10!27;UBERON:0005095!2.47e-10!27;UBERON:0007687!2.47e-10!27;UBERON:0000475!3.12e-10!365;UBERON:0003887!3.40e-10!21;UBERON:0005177!1.60e-09!107;UBERON:0002417!1.67e-09!61;UBERON:0000916!1.67e-09!61;UBERON:0001851!2.62e-09!16;UBERON:0001134!1.33e-08!61;UBERON:0002036!1.33e-08!61;UBERON:0003082!1.33e-08!61;UBERON:0000481!1.98e-08!347;UBERON:0000489!3.22e-08!32;UBERON:0002385!3.61e-08!63;UBERON:0001015!3.61e-08!63;UBERON:0000383!3.61e-08!63;UBERON:0000466!4.01e-08!126;UBERON:0004237!8.01e-08!10;UBERON:0004695!8.01e-08!10;UBERON:0002111!8.01e-08!10;UBERON:0004178!8.01e-08!10;UBERON:0000464!3.96e-07!104;UBERON:0005172!5.15e-07!55;UBERON:0005173!5.15e-07!55;UBERON:0002242!8.25e-07!3;UBERON:0003068!8.25e-07!3;UBERON:0002328!8.25e-07!3;UBERON:0004880!8.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.68e-18;10!UBERON:0009773;4.68e-18;10!UBERON:0001231;4.68e-18;10!UBERON:0004810;4.68e-18;10!UBERON:0006555;6.37e-16;15!UBERON:0004819;6.37e-16;15!UBERON:0001285;6.37e-16;15!UBERON:0007684;6.37e-16;15!UBERON:0004237;5.04e-13;10!UBERON:0004695;5.04e-13;10!UBERON:0002111;5.04e-13;10!UBERON:0004178;5.04e-13;10!UBERON:0005933;4.49e-12;2!UBERON:0005942;4.49e-12;2!UBERON:0005932;4.49e-12;2!UBERON:0001135;4.95e-12;15!UBERON:0000353;6.46e-12;15!UBERON:0001225;1.77e-10;12!UBERON:0008987;1.77e-10;12!UBERON:0002073;3.11e-10;5!UBERON:0002113;1.29e-09;24!UBERON:0011143;1.29e-09;24!UBERON:0002067;3.72e-09;9!UBERON:0007196;1.09e-08;15!UBERON:0001558;1.09e-08;15!UBERON:0001851;2.47e-08;15!UBERON:0006853;6.64e-08;3!UBERON:0007685;6.64e-08;3!UBERON:0004134;6.64e-08;3!UBERON:0005172;7.46e-08;52!UBERON:0005173;7.46e-08;52!UBERON:0000489;8.37e-08;29!UBERON:0006554;1.63e-07;30!UBERON:0001008;1.63e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.12e-18,10;UBERON:0003104,1.13e-17,160;UBERON:0009142,1.13e-17,160;UBERON:0004211,1.18e-15,15;UBERON:0009773,1.18e-15,15;UBERON:0001231,1.18e-15,15;UBERON:0001285,1.18e-15,15;UBERON:0007684,1.18e-15,15;UBERON:0004208,1.18e-15,15;UBERON:0006555,1.27e-14,16;UBERON:0004819,1.27e-14,16;UBERON:0007503,1.82e-13,78;UBERON:0002329,3.26e-13,71;UBERON:0003059,3.26e-13,71;UBERON:0007282,3.26e-13,71;UBERON:0004290,3.26e-13,71;UBERON:0009618,3.26e-13,71;UBERON:0004237,3.59e-13,10;UBERON:0004695,3.59e-13,10;UBERON:0002111,3.59e-13,10;UBERON:0004178,3.59e-13,10;UBERON:0002100,4.49e-13,199;UBERON:0003077,5.52e-13,72;UBERON:0007285,5.52e-13,72;UBERON:0007524,9.19e-13,73;UBERON:0005256,1.67e-12,122;UBERON:0001135,4.59e-12,15;UBERON:0005933,4.63e-12,2;UBERON:0005942,4.63e-12,2;UBERON:0005932,4.63e-12,2;UBERON:0000353,8.63e-12,15;UBERON:0000486,7.65e-11,83;UBERON:0001225,2.39e-10,12;UBERON:0008987,2.39e-10,12;UBERON:0002073,2.93e-10,5;UBERON:0005086,2.93e-10,5;UBERON:0000483,8.51e-10,306;UBERON:0000119,1.22e-09,309;UBERON:0005177,1.26e-09,101;UBERON:0000490,1.34e-09,148;UBERON:0005172,2.58e-09,54;UBERON:0005173,2.58e-09,54;UBERON:0002067,3.65e-09,9;UBERON:0004016,3.65e-09,9;UBERON:0010083,3.65e-09,9;UBERON:0003914,5.03e-09,117;UBERON:0007196,8.93e-09,15;UBERON:0001558,8.93e-09,15;UBERON:0002113,1.16e-08,26;UBERON:0003918,1.16e-08,26;UBERON:0011143,1.16e-08,26;UBERON:0005095,1.16e-08,26;UBERON:0007687,1.16e-08,26;UBERON:0009569,2.36e-08,112;UBERON:0001851,3.13e-08,15;UBERON:0002417,3.51e-08,60;UBERON:0000916,3.51e-08,60;UBERON:0001134,3.78e-08,62;UBERON:0002036,3.78e-08,62;UBERON:0003082,3.78e-08,62;UBERON:0006853,7.14e-08,3;UBERON:0007685,7.14e-08,3;UBERON:0004134,7.14e-08,3;UBERON:0002385,7.88e-08,64;UBERON:0001015,7.88e-08,64;UBERON:0000383,7.88e-08,64;UBERON:0000489,4.01e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.37129905888014,0.662794751455832,2.01697543935533,2.41077811209591,1.46062018077475,1.95173119516203,0.738726348460727,2.44800829493104,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,0,0.298897361103602,1.29177948508141,0.809364721840658,1.40450806702248,0,0,0,0,0,2.73048408581408,7.18618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,3.25057549622385,4.33127689001751,0,0,0,0,0,0,0,0,0,0,5.60967095213783,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,1.57275793023962,0,0,0.65147236858747,1.42156779497018,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,1.89885516589815,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.492762936082855,2.59627214591811,0.116210378459959,0,0,0,0,0,0,1.35359883872224,1.23224539367064,2.35304930753057,0,1.05551628892876,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,2.03901018436031,0,1.34324852833307,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.616194468458578,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,3.71876439437829,0.94443704049192,0,0,0,0,0,0,0,0.316379424718726,1.33441135746677,6.39744478278335,1.28381696410176,0,0,0.899362287916574,0.274537029736055,1.06031162111118,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,7.52408194546694,2.62357900818653,0,0,0,0.286822704408103,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797525143673985,0,0.150257608997218,1.14241563650639,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,1.59020231351293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:46627597..46627646,+ | |||
}} |
Revision as of 16:00, 20 January 2014
Short description: | p@chr17:46627597..46627646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:46627597..46627646, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.12e-18 | 10 |
nephron tubule epithelial cell | 8.12e-18 | 10 |
epithelial cell of nephron | 1.18e-15 | 15 |
kidney cell | 1.04e-13 | 17 |
kidney epithelial cell | 1.04e-13 | 17 |
aortic smooth muscle cell | 3.59e-13 | 10 |
smooth muscle cell | 1.11e-12 | 43 |
smooth muscle myoblast | 1.11e-12 | 43 |
fibroblast of lymphatic vessel | 4.16e-12 | 2 |
smooth muscle cell of trachea | 4.16e-12 | 2 |
outer root sheath cell | 4.63e-12 | 2 |
bronchial smooth muscle cell | 1.42e-11 | 2 |
hepatic stem cell | 2.28e-11 | 2 |
hepatic mesenchymal stem cell | 2.28e-11 | 2 |
kidney cortical cell | 2.39e-10 | 12 |
renal cortical epithelial cell | 2.39e-10 | 12 |
hair follicle cell | 2.93e-10 | 5 |
muscle cell | 1.89e-09 | 55 |
muscle precursor cell | 7.46e-09 | 58 |
myoblast | 7.46e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.46e-09 | 58 |
electrically responsive cell | 2.57e-08 | 61 |
electrically active cell | 2.57e-08 | 61 |
fibroblast of dermis | 4.19e-08 | 6 |
brush border epithelial cell | 7.14e-08 | 3 |
kidney cortex tubule cell | 7.14e-08 | 3 |
epithelial cell of proximal tubule | 7.14e-08 | 3 |
mesodermal cell | 1.34e-07 | 121 |