FFCP PHASE1:Hg19::chr19:3136115..3136165,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4383 | |||
|TSSclassifier=strong | |||
|UniProt=P30679,E9KL47 | |||
|association_with_transcript=-25bp_to_ENST00000262958,NM_002068,uc002lxf.2,uc010xhf.1_5end | |||
|coexpression_cluster_id=C1754 | |||
|description=CAGE_peak_2_at_GNA15_5end | |||
|id=chr19:3136115..3136165,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.97e-64!172;CL:0000566!5.97e-64!172;CL:0002032!2.56e-58!165;CL:0000837!2.56e-58!165;CL:0000988!9.84e-57!182;CL:0000763!1.07e-56!112;CL:0000049!1.07e-56!112;CL:0000738!8.64e-51!140;CL:0000766!1.31e-42!76;CL:0002031!6.13e-40!124;CL:0000557!2.37e-39!71;CL:0000839!3.43e-37!70;CL:0002087!3.36e-36!119;CL:0002009!1.42e-35!65;CL:0002194!6.80e-34!63;CL:0000576!6.80e-34!63;CL:0000040!6.80e-34!63;CL:0000559!6.80e-34!63;CL:0002057!2.19e-32!42;CL:0000860!1.17e-28!45;CL:0000451!5.23e-09!10;CL:0002393!1.86e-07!9;CL:0002397!1.86e-07!9;CL:0000990!2.32e-07!8;CL:0000094!6.77e-07!8;CL:0000134!8.31e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-30;33!CL:0002057;1.95e-30;33!CL:0000473;4.35e-29;39!CL:0000234;4.35e-29;39!CL:0000576;9.22e-28;48!CL:0000766;5.92e-25;69!CL:0000763;1.68e-21;100!CL:0000738;8.34e-15;136!CL:0002087;3.61e-14;104!CL:0000988;6.30e-13;177!CL:0000451;4.02e-11;10!CL:0000990;5.23e-09;8!CL:0000094;2.02e-08;8!CL:0002393;3.82e-07;6!CL:0002397;3.82e-07;6!CL:0000840;9.37e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.87e-85,168;CL:0000988,6.58e-78,177;CL:0002032,1.83e-77,161;CL:0000837,1.83e-77,161;CL:0000763,2.88e-77,108;CL:0000049,2.88e-77,108;CL:0000738,9.12e-69,136;CL:0000766,1.07e-60,72;CL:0000557,1.86e-56,67;CL:0002031,2.54e-53,120;CL:0000839,2.91e-52,66;CL:0002009,1.51e-51,61;CL:0002087,1.65e-49,115;CL:0002194,2.61e-49,59;CL:0000576,2.61e-49,59;CL:0000040,2.61e-49,59;CL:0000559,2.61e-49,59;CL:0000473,1.04e-45,48;CL:0000234,1.04e-45,48;CL:0000860,2.92e-41,42;CL:0002057,2.92e-41,42;CL:0000134,9.45e-18,354;CL:0002320,1.36e-16,361;CL:0000219,2.41e-13,386;CL:0000451,3.87e-11,10;CL:0000034,2.62e-09,441;CL:0002393,3.78e-09,9;CL:0002397,3.78e-09,9;CL:0000990,5.03e-09,8;CL:0000723,8.99e-09,433;CL:0000094,1.98e-08,8;CL:0000048,3.75e-08,427;CL:0000840,9.10e-07,5;CL:0001029,9.10e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;8.58e-30;42!CL:0000049;1.34e-20;108 | |||
|ontology_enrichment_disease=DOID:1240!8.64e-12!39;DOID:8692!2.80e-10!31;DOID:2531!3.58e-09!51;DOID:0060083!3.58e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.61e-12;31!DOID:1240;5.97e-12;39!DOID:2531;7.49e-08;51!DOID:0060083;7.49e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.90e-15,39;DOID:8692,7.45e-13,31;DOID:2531,3.33e-12,51;DOID:0060083,3.33e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.38e-39!102;UBERON:0003061!6.38e-39!102;UBERON:0002371!4.02e-34!80;UBERON:0002193!8.58e-34!112;UBERON:0001474!2.04e-29!86;UBERON:0004765!2.94e-23!101;UBERON:0001434!2.94e-23!101;UBERON:0002405!9.16e-22!115;UBERON:0007023!8.15e-08!115;UBERON:0003081!3.68e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.80e-57,98;UBERON:0003061,4.80e-57,98;UBERON:0002193,4.93e-51,108;UBERON:0002371,3.03e-50,76;UBERON:0002405,3.63e-45,93;UBERON:0001474,1.61e-44,82;UBERON:0004765,1.72e-40,90;UBERON:0001434,1.11e-33,100;UBERON:0002384,1.85e-15,371;UBERON:0003081,7.25e-15,203;UBERON:0002204,5.91e-11,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,13.6015862231353,11.3298813440925,9.36658297632783,70.0188412791049,28.0195460610965,78.4917745212505,3.67768489791571,4.819294700452,3.32778609150109,0,0,59.3072887456391,96.3952010845467,107.090734949056,85.0682613206139,6.49354875295781,4.85840499028469,5.6666624879521,50.453188856509,35.5203387067481,45.1206353809338,114.819944231408,83.4670812684306,62.870393291706,86.3077176966451,66.089462284508,48.7153393570486,69.6386275087969,57.4481368389605,82.6101568225485,126.687094512173,67.9536313644036,62.9225756446237,131.003905934746,79.2694696877951,76.7204550958849,53.1060593300613,42.6852227310292,46.8847225585964,144.233991598406,102.696725669096,84.0810036144026,45.978505741984,64.1423989656848,37.1392924445749,92.0207244002721,68.1313626576995,55.0644554147139,19.0129757680748,23.8116815960849,21.175523196346,18.8712100326112,21.7756494620184,12.054419002281,12.5405607246149,9.15016715115815,9.31587184199633,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,2.34894875748376,1.14681968437569,95.1633565768986,111.541204033326,18.7002700190305,3.14735632182133,9.82526906872912,9.25206745497792,0,0.32592226663359,0,0,12.9236129986801,4.12448270464772,4.65221178625604,2.16643091012012,6.78883994546078,11.0550445425897,1.97325485524411,3.59255023121603,2.60822777161547,0,0,0,1.92625882585863,3.06576394881537,3.77990190030893,2.27717722817553,0,0,0,1.20460095262218,0.639933055772092,2.49861453104692,1.65744076430812,0,3.22570789159572,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,1.45718115317017,1.85392221392215,10.7100639906045,7.31344896656922,12.8969221703299,107.320780937404,122.406910906947,98.4362378523347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7587544513434,65.9226449052153,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,2.45471508531751,4.01526433544605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,29.5780276607816,0,0,1.64625428112938,3.37205259772859,2.21163739305588,0.185176890317059,0,0,0,0,0,0,0,0,0,0,7.63272718870932,8.89216207529103,16.3494278517601,0,4.03157107677263,1.13420077793909,1.34337784054272,1.16253575405585,1.91691339582606,1.47798971368783,4.0502279646084,46.8561541122145,64.9980989910496,31.6868507900214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,10.0451418286425,18.9750545534728,0,0,0,0,0,0,0,7.09310736726938,5.17506179662842,7.18721003166591,0,0,0,0.167516265334349,0,20.9721966705211,8.97484377612075,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1279060375852,27.611417704783,21.3455115606889,0.303127571446259,1.66435439510497,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,4.21063587636898,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.8300481571743,0,0,0,1.13345112812495,0,0,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0,1.4875642382488,1.34533047155574,0.510450849978337,1.0115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0,0,2.11688647996127,3.35151137767894,4.3556393944529,1.69458841398202,6.45758059006845,1.68471475667626,4.43430153536676,2.98640420269047,6.5968189200182,4.58782324285425,3.98753031021914,3.57347663186684,4.11362273086194,4.53931317834902,2.70015718619057,7.13812658664843,0,0,0.245040215981032,0,8.51188356561025,1.63626239701352,3.50737800003409,24.1491039433708,45.1952673512385,40.8530014657094,6.49243880549111,53.0706666634437,19.6281823968545,10.0275133294735,22.557102938106,28.9488940040742,33.2417315464658,44.3959355820305,5.96184732766457,7.21361223987106,2.15068535015921,1.3420566473545,2.50273712567863,3.90776190804081,6.12493582569533,0,2.16364542780786,23.3150377598474,4.22961015263549,0,1.61158997199083,0,27.3036291479822,0,0.95497793895076,1.18785872333055,0,0,0.422008249231538,0,0.329607748453519,0,2.39097585901284,1.65770349318689,0,0,13.4162437952566,0,0.808815160325942,0,4.09257896181497,2.66337195219721,4.7896618469388,0,0,0.463840490809256,0,0,0,0,0.568967241427498,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0.438770794307945,0,0.557694977114413,0.538651809526579,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,23.5044585850194,16.6399071778726,4.82013877510454,0,0,0,0.569261198172555,9.21832158086196,0,0,0,0,0,0.176915129006678,0,0,0,0,0.943615861729479,0,0,0,0.19566461893209,0,0,1.20990716048664,0.91821828489147,6.76096402024821,0,0,1.99396161812156,3.97190347050599,2.82539626566503,1.19472429772959,0,0,0.173559738335131,0.0979923974143777,0.783532859223623,0.873633341210151,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.253243183823515,0.195551382734803,1.04206466326994,1.49417096317547,0.19980960958213,0,0,0,0.288109595976299,2.23654564017779,0.471388069233591,0,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| |||
|short_description=p2@GNA15 | |||
}} |
Revision as of 20:29, 20 January 2014
Short description: | p2@GNA15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNA15_5end |
Coexpression cluster: | C1754_immature_CD14_Dendritic_CD34_Basophils_Mast_migratory |
Association with transcript: | -25bp_to_ENST00000262958, NM_002068, uc002lxf.2, uc010xhf.1_5end |
EntrezGene: | GNA15 |
HGNC: | 4383 |
UniProt: | P30679E9KL47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.80e-57 | 98 |
blood island | 4.80e-57 | 98 |
hemolymphoid system | 4.93e-51 | 108 |
bone marrow | 3.03e-50 | 76 |
immune system | 3.63e-45 | 93 |
bone element | 1.61e-44 | 82 |
skeletal element | 1.72e-40 | 90 |
skeletal system | 1.11e-33 | 100 |
connective tissue | 1.85e-15 | 371 |
lateral plate mesoderm | 7.25e-15 | 203 |
musculoskeletal system | 5.91e-11 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.90e-15 | 39 |
myeloid leukemia | 7.45e-13 | 31 |
hematologic cancer | 3.33e-12 | 51 |
immune system cancer | 3.33e-12 | 51 |