FFCP PHASE1:Hg19::chr19:41222775..41222807,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19041 | |||
|TSSclassifier=strong | |||
|UniProt=Q96D53 | |||
|association_with_transcript=0bp_to_ENST00000324464,ENST00000450541,NM_024876,uc002oor.2,uc002oos.2_5end | |||
|description=CAGE_peak_1_at_ADCK4_5end | |||
|id=chr19:41222775..41222807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.55e-14!86;UBERON:0001017!2.29e-14!82;UBERON:0000073!2.67e-14!94;UBERON:0001016!2.67e-14!94;UBERON:0000955!1.29e-12!69;UBERON:0006238!1.29e-12!69;UBERON:0001049!2.31e-12!57;UBERON:0005068!2.31e-12!57;UBERON:0006241!2.31e-12!57;UBERON:0007135!2.31e-12!57;UBERON:0002346!4.01e-12!90;UBERON:0002616!5.25e-12!59;UBERON:0003075!1.26e-11!86;UBERON:0007284!1.26e-11!86;UBERON:0000924!4.58e-11!173;UBERON:0006601!4.58e-11!173;UBERON:0004121!1.41e-10!169;UBERON:0007023!4.74e-10!115;UBERON:0003056!1.24e-09!61;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0002780!2.11e-09!41;UBERON:0001890!2.11e-09!41;UBERON:0006240!2.11e-09!41;UBERON:0000033!5.45e-09!123;UBERON:0003080!1.13e-08!42;UBERON:0002020!1.95e-07!34;UBERON:0003528!1.95e-07!34;UBERON:0001893!2.78e-07!34;UBERON:0002791!4.20e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.79e-08;53!UBERON:0002616;5.79e-08;53!UBERON:0002780;1.52e-07;41!UBERON:0001890;1.52e-07;41!UBERON:0001893;6.58e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.24e-15,81;UBERON:0001016,7.95e-15,89;UBERON:0000955,2.36e-13,68;UBERON:0006238,2.36e-13,68;UBERON:0001049,3.51e-13,56;UBERON:0005068,3.51e-13,56;UBERON:0006241,3.51e-13,56;UBERON:0007135,3.51e-13,56;UBERON:0002346,3.98e-13,86;UBERON:0000073,6.26e-13,53;UBERON:0002616,6.26e-13,53;UBERON:0003075,1.25e-12,82;UBERON:0007284,1.25e-12,82;UBERON:0004121,2.10e-11,171;UBERON:0000924,2.10e-11,171;UBERON:0006601,2.10e-11,171;UBERON:0003056,1.37e-10,61;UBERON:0010371,3.57e-10,104;UBERON:0007023,5.03e-10,114;UBERON:0002780,1.97e-09,41;UBERON:0001890,1.97e-09,41;UBERON:0003080,1.97e-09,41;UBERON:0006240,1.97e-09,41;UBERON:0011216,4.18e-08,223;UBERON:0003528,1.85e-07,34;UBERON:0002020,1.85e-07,34;UBERON:0010314,2.15e-07,132;UBERON:0001893,2.65e-07,34;UBERON:0002791,7.33e-07,32 | |||
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| |||
|short_description=p1@ADCK4 | |||
}} |
Revision as of 23:22, 20 January 2014
Short description: | p1@ADCK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADCK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324464, ENST00000450541, NM_024876, uc002oor.2, uc002oos.2_5end |
EntrezGene: | ADCK4 |
HGNC: | 19041 |
UniProt: | Q96D53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.24e-15 | 81 |
nervous system | 7.95e-15 | 89 |
brain | 2.36e-13 | 68 |
future brain | 2.36e-13 | 68 |
neural tube | 3.51e-13 | 56 |
neural rod | 3.51e-13 | 56 |
future spinal cord | 3.51e-13 | 56 |
neural keel | 3.51e-13 | 56 |
neurectoderm | 3.98e-13 | 86 |
regional part of nervous system | 6.26e-13 | 53 |
regional part of brain | 6.26e-13 | 53 |
neural plate | 1.25e-12 | 82 |
presumptive neural plate | 1.25e-12 | 82 |
ectoderm-derived structure | 2.10e-11 | 171 |
ectoderm | 2.10e-11 | 171 |
presumptive ectoderm | 2.10e-11 | 171 |
pre-chordal neural plate | 1.37e-10 | 61 |
ecto-epithelium | 3.57e-10 | 104 |
adult organism | 5.03e-10 | 114 |
regional part of forebrain | 1.97e-09 | 41 |
forebrain | 1.97e-09 | 41 |
anterior neural tube | 1.97e-09 | 41 |
future forebrain | 1.97e-09 | 41 |
organ system subdivision | 4.18e-08 | 223 |
brain grey matter | 1.85e-07 | 34 |
gray matter | 1.85e-07 | 34 |
structure with developmental contribution from neural crest | 2.15e-07 | 132 |
telencephalon | 2.65e-07 | 34 |
regional part of telencephalon | 7.33e-07 | 32 |