FFCP PHASE1:Hg19::chr20:32077953..32077965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1536 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TGE8 | |||
|association_with_transcript=14bp_to_ENST00000417366_5end | |||
|description=CAGE_peak_2_at_CBFA2T2_5end | |||
|id=chr20:32077953..32077965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.44e-19!235;DOID:14566!6.43e-19!239;DOID:0050687!7.04e-19!143;DOID:305!5.16e-16!106;DOID:0050686!3.50e-08!137;DOID:3095!6.23e-07!22;DOID:2994!6.23e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:169;2.20e-08;6!DOID:3095;2.18e-07;22!DOID:2994;2.18e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.41e-08,6;DOID:3095,1.38e-07,22;DOID:2994,1.38e-07,22;DOID:171,6.63e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.35e-12!82;UBERON:0000073!8.94e-12!94;UBERON:0001016!8.94e-12!94;UBERON:0001049!6.01e-11!57;UBERON:0005068!6.01e-11!57;UBERON:0006241!6.01e-11!57;UBERON:0007135!6.01e-11!57;UBERON:0005743!1.43e-10!86;UBERON:0001893!2.08e-10!34;UBERON:0002020!3.15e-10!34;UBERON:0003528!3.15e-10!34;UBERON:0002780!3.69e-10!41;UBERON:0001890!3.69e-10!41;UBERON:0006240!3.69e-10!41;UBERON:0002791!6.76e-10!33;UBERON:0001869!1.40e-09!32;UBERON:0003080!1.63e-09!42;UBERON:0002619!4.01e-09!22;UBERON:0000955!1.03e-08!69;UBERON:0006238!1.03e-08!69;UBERON:0002616!3.40e-08!59;UBERON:0001950!3.75e-08!20;UBERON:0002346!6.94e-08!90;UBERON:0000956!1.08e-07!25;UBERON:0000203!1.08e-07!25;UBERON:0003075!3.22e-07!86;UBERON:0007284!3.22e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.05e-09;34!UBERON:0002020;3.05e-09;34!UBERON:0001893;3.23e-09;34!UBERON:0001869;4.40e-09;32!UBERON:0002619;4.62e-09;22!UBERON:0001950;1.78e-08;20!UBERON:0002791;5.32e-08;32!UBERON:0000956;1.04e-07;25!UBERON:0000203;1.04e-07;25!UBERON:0000073;2.69e-07;53!UBERON:0002616;2.69e-07;53!UBERON:0002780;2.83e-07;41!UBERON:0001890;2.83e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-12,53;UBERON:0002616,1.20e-12,53;UBERON:0001016,1.25e-12,89;UBERON:0001893,7.64e-12,34;UBERON:0001049,1.17e-11,56;UBERON:0005068,1.17e-11,56;UBERON:0006241,1.17e-11,56;UBERON:0007135,1.17e-11,56;UBERON:0001869,2.97e-11,32;UBERON:0001017,1.65e-10,81;UBERON:0002780,2.72e-10,41;UBERON:0001890,2.72e-10,41;UBERON:0003080,2.72e-10,41;UBERON:0006240,2.72e-10,41;UBERON:0003528,2.95e-10,34;UBERON:0002020,2.95e-10,34;UBERON:0002619,9.20e-10,22;UBERON:0002791,9.75e-10,32;UBERON:0001950,4.57e-09,20;UBERON:0011216,5.08e-09,223;UBERON:0000955,2.11e-08,68;UBERON:0006238,2.11e-08,68;UBERON:0000956,2.61e-08,25;UBERON:0000203,2.61e-08,25;UBERON:0002346,2.96e-07,86;UBERON:0003075,4.57e-07,82;UBERON:0007284,4.57e-07,82;UBERON:0004121,9.82e-07,171;UBERON:0000924,9.82e-07,171;UBERON:0006601,9.82e-07,171 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0.369754010166788,0.309868802321207,0.142169232487422,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0,0,1.01778767145695,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0.368277635987565,0,0,0.637812899895131,0.419317291016752,0.112328631146495,0.300353785683013,0.32145117339416,0,0.39783335439818,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0.560508562981536,0,2.16380747125216,0,0.822405995998037,0,1.30368906653436,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,0.267440195783507,1.15859523106239,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,1.21890816109487,0.132957960518865,2.14641561874808,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.168776332241266,0.389748020644795,0.252433774244115,0.460249493211497,0.161646056818812,0.710019185033229,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.813357600086629,0.725627385107593,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0.435758888184812,0,0.539325232640658,0.196221465125346,0,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,1.32438929824395,1.59884970106048,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.447792613514241,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.253991577168676,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0.718874566474748,0,2.85273810081437,0,0,0.179060963239896,0.112085143993527,0.394061520403854,1.07813787429759,1.28343036279748,0.508189248444927,1.30139853857622,1.54657762555539,1.00509759200609,3.18969375826582,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0,0.356857977594324,0.473107245101804,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,1.03384013061444,0.862856803274467,0.640365346820666,0,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.355123450626254,0.0821271560138091,0,0,0.846016147141356,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0.183138929636687,0.907604499126468,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.576570202095319,0.382838137483752,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,1.239293992399,0,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,1.08890984861323,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,3.84991942105343,0.980160863924127,0.371606350251437,0.432807638929335,0.569134746787313,0.318852545457645,1.1974762285969,0.766021480529467,0,0.324621940274555,0.561594356226918,1.59764275323235,0.156679895773023,5.01268954180134,0.50787533340481,0.963528450622197,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0.333698283423817,0.586164286206121,0.278406173895242,0,0,0.66614393599564,4.22961015263549,0.748562161632879,0,0.849523652246594,1.00299045849731,0.568272293612826,0,0.593929361665277,0,0,0.984685914873589,0,0.824019371133798,0.63337622438398,0,0.552567831062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| |||
|short_description=p2@CBFA2T2 | |||
}} |
Revision as of 10:49, 21 January 2014
Short description: | p2@CBFA2T2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBFA2T2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000417366_5end |
EntrezGene: | CBFA2T2 |
HGNC: | 1536 |
UniProt: | Q5TGE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.20e-12 | 53 |
regional part of brain | 1.20e-12 | 53 |
nervous system | 1.25e-12 | 89 |
telencephalon | 7.64e-12 | 34 |
neural tube | 1.17e-11 | 56 |
neural rod | 1.17e-11 | 56 |
future spinal cord | 1.17e-11 | 56 |
neural keel | 1.17e-11 | 56 |
cerebral hemisphere | 2.97e-11 | 32 |
central nervous system | 1.65e-10 | 81 |
regional part of forebrain | 2.72e-10 | 41 |
forebrain | 2.72e-10 | 41 |
anterior neural tube | 2.72e-10 | 41 |
future forebrain | 2.72e-10 | 41 |
brain grey matter | 2.95e-10 | 34 |
gray matter | 2.95e-10 | 34 |
regional part of cerebral cortex | 9.20e-10 | 22 |
regional part of telencephalon | 9.75e-10 | 32 |
neocortex | 4.57e-09 | 20 |
organ system subdivision | 5.08e-09 | 223 |
brain | 2.11e-08 | 68 |
future brain | 2.11e-08 | 68 |
cerebral cortex | 2.61e-08 | 25 |
pallium | 2.61e-08 | 25 |
neurectoderm | 2.96e-07 | 86 |
neural plate | 4.57e-07 | 82 |
presumptive neural plate | 4.57e-07 | 82 |
ectoderm-derived structure | 9.82e-07 | 171 |
ectoderm | 9.82e-07 | 171 |
presumptive ectoderm | 9.82e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.41e-08 | 6 |
germ cell and embryonal cancer | 1.38e-07 | 22 |
germ cell cancer | 1.38e-07 | 22 |
neuroectodermal tumor | 6.63e-07 | 10 |