FFCP PHASE1:Hg19::chr3:36916021..36916039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29011 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-297bp_to_ENST00000513141_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_10_at_TRANK1_5end | |||
|id=chr3:36916021..36916039,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.96e-18;2!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.80e-61!57;UBERON:0005068!4.80e-61!57;UBERON:0006241!4.80e-61!57;UBERON:0007135!4.80e-61!57;UBERON:0002780!3.19e-58!41;UBERON:0001890!3.19e-58!41;UBERON:0006240!3.19e-58!41;UBERON:0003080!8.68e-57!42;UBERON:0002616!1.12e-53!59;UBERON:0001017!2.87e-53!82;UBERON:0001869!1.34e-52!32;UBERON:0005743!1.17e-50!86;UBERON:0001893!2.01e-49!34;UBERON:0002020!2.62e-49!34;UBERON:0003528!2.62e-49!34;UBERON:0000955!3.33e-49!69;UBERON:0006238!3.33e-49!69;UBERON:0000073!1.43e-45!94;UBERON:0001016!1.43e-45!94;UBERON:0002791!1.11e-44!33;UBERON:0003075!2.28e-39!86;UBERON:0007284!2.28e-39!86;UBERON:0003056!2.61e-38!61;UBERON:0002346!1.84e-37!90;UBERON:0002619!2.36e-35!22;UBERON:0001950!3.31e-32!20;UBERON:0000956!4.63e-31!25;UBERON:0000203!4.63e-31!25;UBERON:0007023!9.72e-29!115;UBERON:0000033!3.38e-26!123;UBERON:0000153!8.27e-25!129;UBERON:0007811!8.27e-25!129;UBERON:0004121!7.87e-24!169;UBERON:0001872!3.21e-23!5;UBERON:0000924!3.44e-23!173;UBERON:0006601!3.44e-23!173;UBERON:0002420!1.34e-20!9;UBERON:0007245!1.34e-20!9;UBERON:0010009!1.34e-20!9;UBERON:0010011!1.34e-20!9;UBERON:0000454!1.34e-20!9;UBERON:0002308!2.27e-20!9;UBERON:0000125!2.27e-20!9;UBERON:0000369!1.14e-17!4;UBERON:0002435!1.14e-17!4;UBERON:0000204!1.14e-17!4;UBERON:0010082!1.14e-17!4;UBERON:0009663!2.08e-17!7;UBERON:0001897!8.66e-16!2;UBERON:0000025!2.83e-15!194;UBERON:0000349!1.27e-13!5;UBERON:0004111!1.75e-11!241;UBERON:0000200!2.75e-11!6;UBERON:0005383!4.16e-11!3;UBERON:0005382!4.16e-11!3;UBERON:0000988!4.39e-10!3;UBERON:0001894!5.54e-10!7;UBERON:0006222!5.54e-10!7;UBERON:0000483!4.89e-09!309;UBERON:0000477!5.20e-09!286;UBERON:0001874!5.59e-09!1;UBERON:0001882!6.50e-09!1;UBERON:0005403!6.50e-09!1;UBERON:0000119!6.58e-09!312;UBERON:0001871!1.14e-08!7;UBERON:0002022!1.18e-08!1;UBERON:0007190!1.84e-08!1;UBERON:0002581!1.98e-08!1;UBERON:0002298!2.50e-08!8;UBERON:0002902!2.84e-08!1;UBERON:0009899!2.84e-08!1;UBERON:0000064!4.31e-08!219;UBERON:0000475!7.94e-08!365;UBERON:0003076!1.35e-07!15;UBERON:0003057!1.35e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.77e-74;4!UBERON:0002435;1.77e-74;4!UBERON:0000204;1.77e-74;4!UBERON:0005383;4.99e-45;3!UBERON:0005382;4.99e-45;3!UBERON:0009663;4.86e-43;7!UBERON:0001874;2.18e-34;1!UBERON:0001882;5.97e-34;1!UBERON:0005403;5.97e-34;1!UBERON:0002420;1.05e-33;9!UBERON:0000125;1.05e-33;9!UBERON:0007245;1.05e-33;9!UBERON:0002308;1.05e-33;9!UBERON:0010009;1.05e-33;9!UBERON:0010011;1.05e-33;9!UBERON:0000454;1.05e-33;9!UBERON:0001873;5.96e-18;2!UBERON:0002791;6.07e-16;32!UBERON:0003528;3.47e-15;34!UBERON:0002020;3.47e-15;34!UBERON:0001869;1.17e-14;32!UBERON:0001893;1.94e-14;34!UBERON:0002780;1.89e-11;41!UBERON:0001890;1.89e-11;41!UBERON:0000073;5.96e-10;53!UBERON:0002616;5.96e-10;53!UBERON:0001872;6.78e-08;5!UBERON:0000349;6.78e-08;5!UBERON:0000955;1.67e-07;68!UBERON:0001017;7.32e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.21e-74,4;UBERON:0002435,1.21e-74,4;UBERON:0000204,1.21e-74,4;UBERON:0010082,1.21e-74,4;UBERON:0005383,5.00e-45,3;UBERON:0005382,5.00e-45,3;UBERON:0009663,3.92e-43,7;UBERON:0001874,1.84e-34,1;UBERON:0001882,3.61e-34,1;UBERON:0005403,3.61e-34,1;UBERON:0002420,8.87e-34,9;UBERON:0000125,8.87e-34,9;UBERON:0007245,8.87e-34,9;UBERON:0002308,8.87e-34,9;UBERON:0010009,8.87e-34,9;UBERON:0010011,8.87e-34,9;UBERON:0000454,8.87e-34,9;UBERON:0001873,6.48e-18,2;UBERON:0010122,6.48e-18,2;UBERON:0002791,1.24e-16,32;UBERON:0001869,1.24e-16,32;UBERON:0003528,1.01e-15,34;UBERON:0002020,1.01e-15,34;UBERON:0001893,1.01e-15,34;UBERON:0002780,3.31e-13,41;UBERON:0001890,3.31e-13,41;UBERON:0003080,3.31e-13,41;UBERON:0006240,3.31e-13,41;UBERON:0001017,2.00e-10,81;UBERON:0000073,2.12e-10,53;UBERON:0002616,2.12e-10,53;UBERON:0001049,7.01e-10,56;UBERON:0005068,7.01e-10,56;UBERON:0006241,7.01e-10,56;UBERON:0007135,7.01e-10,56;UBERON:0001016,1.91e-09,89;UBERON:0003056,3.98e-09,61;UBERON:0000955,3.85e-08,68;UBERON:0006238,3.85e-08,68;UBERON:0000349,6.13e-08,5;UBERON:0001872,6.55e-08,5;UBERON:0003075,6.13e-07,82;UBERON:0007284,6.13e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,5.18564686089254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0.0634158101939068,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,5.49904564706007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@TRANK1 | |||
}} |
Revision as of 18:10, 21 January 2014
Short description: | p10@TRANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TRANK1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -297bp_to_ENST00000513141_5end |
EntrezGene: | TRANK1 |
HGNC: | 29011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |