FFCP PHASE1:Hg19::chr5:32444828..32444872,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17277 | |||
|TSSclassifier=strong | |||
|UniProt=Q96KR1,B5MEH6,Q05D65 | |||
|association_with_transcript=0bp_to_ENST00000265069,ENST00000382126,ENST00000416900,ENST00000505366,NM_016107,uc003jhr.1,uc010iun.1_5end | |||
|description=CAGE_peak_2_at_ZFR_5end | |||
|id=chr5:32444828..32444872,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.81e-07;82 | |||
|ontology_enrichment_disease=DOID:162!2.70e-11!235;DOID:14566!1.15e-10!239;DOID:0050687!2.84e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.70e-11,235;DOID:14566,1.15e-10,239;DOID:0050687,2.84e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-15!57;UBERON:0005068!2.32e-15!57;UBERON:0006241!2.32e-15!57;UBERON:0007135!2.32e-15!57;UBERON:0003080!1.54e-14!42;UBERON:0002780!3.25e-14!41;UBERON:0001890!3.25e-14!41;UBERON:0006240!3.25e-14!41;UBERON:0000955!1.43e-13!69;UBERON:0006238!1.43e-13!69;UBERON:0000073!1.84e-13!94;UBERON:0001016!1.84e-13!94;UBERON:0001017!3.43e-13!82;UBERON:0002616!1.72e-12!59;UBERON:0000924!4.59e-12!173;UBERON:0006601!4.59e-12!173;UBERON:0004121!1.09e-11!169;UBERON:0005743!2.63e-11!86;UBERON:0001893!3.60e-11!34;UBERON:0002020!5.95e-11!34;UBERON:0003528!5.95e-11!34;UBERON:0002791!8.45e-11!33;UBERON:0007023!1.22e-10!115;UBERON:0001869!1.60e-10!32;UBERON:0002346!2.51e-10!90;UBERON:0003075!5.36e-10!86;UBERON:0007284!5.36e-10!86;UBERON:0000153!6.74e-10!129;UBERON:0007811!6.74e-10!129;UBERON:0000033!1.14e-09!123;UBERON:0003056!4.59e-08!61;UBERON:0000956!1.10e-07!25;UBERON:0000203!1.10e-07!25;UBERON:0002619!9.18e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.73e-10;41!UBERON:0001890;1.73e-10;41!UBERON:0002791;1.00e-09;32!UBERON:0001893;1.22e-09;34!UBERON:0001869;1.91e-09;32!UBERON:0003528;2.27e-09;34!UBERON:0002020;2.27e-09;34!UBERON:0000073;5.57e-09;53!UBERON:0002616;5.57e-09;53!UBERON:0000956;1.03e-07;25!UBERON:0000203;1.03e-07;25!UBERON:0001016;1.83e-07;83!UBERON:0002619;8.93e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.83e-15,89;UBERON:0001049,4.92e-15,56;UBERON:0005068,4.92e-15,56;UBERON:0006241,4.92e-15,56;UBERON:0007135,4.92e-15,56;UBERON:0002780,3.25e-14,41;UBERON:0001890,3.25e-14,41;UBERON:0003080,3.25e-14,41;UBERON:0006240,3.25e-14,41;UBERON:0000073,4.08e-14,53;UBERON:0002616,4.08e-14,53;UBERON:0000955,2.92e-13,68;UBERON:0006238,2.92e-13,68;UBERON:0001017,6.82e-13,81;UBERON:0001893,3.60e-11,34;UBERON:0004121,5.46e-11,171;UBERON:0000924,5.46e-11,171;UBERON:0006601,5.46e-11,171;UBERON:0003528,5.95e-11,34;UBERON:0002020,5.95e-11,34;UBERON:0002791,1.43e-10,32;UBERON:0001869,1.60e-10,32;UBERON:0007023,2.99e-10,114;UBERON:0002346,1.33e-09,86;UBERON:0003075,2.82e-09,82;UBERON:0007284,2.82e-09,82;UBERON:0010314,7.44e-09,132;UBERON:0011216,3.98e-08,223;UBERON:0003056,8.37e-08,61;UBERON:0000956,1.10e-07,25;UBERON:0000203,1.10e-07,25;UBERON:0010371,5.74e-07,104;UBERON:0002619,9.18e-07,22 | |||
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| |||
|short_description=p2@ZFR | |||
}} |
Revision as of 04:56, 22 January 2014
Short description: | p2@ZFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265069, ENST00000382126, ENST00000416900, ENST00000505366, NM_016107, uc003jhr.1, uc010iun.1_5end |
EntrezGene: | ZFR |
HGNC: | 17277 |
UniProt: | Q96KR1B5MEH6Q05D65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.83e-15 | 89 |
neural tube | 4.92e-15 | 56 |
neural rod | 4.92e-15 | 56 |
future spinal cord | 4.92e-15 | 56 |
neural keel | 4.92e-15 | 56 |
regional part of forebrain | 3.25e-14 | 41 |
forebrain | 3.25e-14 | 41 |
anterior neural tube | 3.25e-14 | 41 |
future forebrain | 3.25e-14 | 41 |
regional part of nervous system | 4.08e-14 | 53 |
regional part of brain | 4.08e-14 | 53 |
brain | 2.92e-13 | 68 |
future brain | 2.92e-13 | 68 |
central nervous system | 6.82e-13 | 81 |
telencephalon | 3.60e-11 | 34 |
ectoderm-derived structure | 5.46e-11 | 171 |
ectoderm | 5.46e-11 | 171 |
presumptive ectoderm | 5.46e-11 | 171 |
brain grey matter | 5.95e-11 | 34 |
gray matter | 5.95e-11 | 34 |
regional part of telencephalon | 1.43e-10 | 32 |
cerebral hemisphere | 1.60e-10 | 32 |
adult organism | 2.99e-10 | 114 |
neurectoderm | 1.33e-09 | 86 |
neural plate | 2.82e-09 | 82 |
presumptive neural plate | 2.82e-09 | 82 |
structure with developmental contribution from neural crest | 7.44e-09 | 132 |
organ system subdivision | 3.98e-08 | 223 |
pre-chordal neural plate | 8.37e-08 | 61 |
cerebral cortex | 1.10e-07 | 25 |
pallium | 1.10e-07 | 25 |
ecto-epithelium | 5.74e-07 | 104 |
regional part of cerebral cortex | 9.18e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.70e-11 | 235 |
disease of cellular proliferation | 1.15e-10 | 239 |
cell type cancer | 2.84e-09 | 143 |