FFCP PHASE1:Hg19::chr7:5464974..5464999,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11962 | |||
|TSSclassifier=strong | |||
|UniProt=A8MTZ4 | |||
|association_with_transcript=45bp_to_ENST00000399434,uc003sok.1_5end | |||
|description=CAGE_peak_9_at_TNRC18_5end | |||
|id=chr7:5464974..5464999,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.13e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.88e-15!94;UBERON:0001016!7.88e-15!94;UBERON:0000468!2.44e-13!659;UBERON:0001017!3.44e-13!82;UBERON:0005743!6.63e-13!86;UBERON:0000924!8.44e-13!173;UBERON:0006601!8.44e-13!173;UBERON:0001869!1.04e-12!32;UBERON:0000956!3.78e-12!25;UBERON:0000203!3.78e-12!25;UBERON:0001049!6.48e-12!57;UBERON:0005068!6.48e-12!57;UBERON:0006241!6.48e-12!57;UBERON:0007135!6.48e-12!57;UBERON:0002619!7.24e-12!22;UBERON:0000955!8.18e-12!69;UBERON:0006238!8.18e-12!69;UBERON:0002780!8.58e-12!41;UBERON:0001890!8.58e-12!41;UBERON:0006240!8.58e-12!41;UBERON:0004121!9.38e-12!169;UBERON:0001893!9.55e-12!34;UBERON:0002791!2.30e-11!33;UBERON:0001950!2.42e-11!20;UBERON:0002020!4.20e-11!34;UBERON:0003528!4.20e-11!34;UBERON:0002616!4.38e-11!59;UBERON:0003080!4.98e-11!42;UBERON:0000922!8.17e-11!612;UBERON:0002050!1.49e-10!605;UBERON:0005423!1.49e-10!605;UBERON:0000033!1.72e-10!123;UBERON:0000475!1.82e-10!365;UBERON:0000923!2.69e-10!604;UBERON:0005291!2.69e-10!604;UBERON:0006598!2.69e-10!604;UBERON:0002532!2.69e-10!604;UBERON:0000153!3.23e-10!129;UBERON:0007811!3.23e-10!129;UBERON:0002346!9.52e-10!90;UBERON:0000062!2.23e-09!511;UBERON:0007023!3.53e-09!115;UBERON:0000467!3.73e-09!625;UBERON:0000480!6.03e-09!626;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0003056!2.11e-08!61;UBERON:0000064!5.36e-08!219;UBERON:0000481!8.88e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.50e-16;22!UBERON:0001950;7.56e-16;20!UBERON:0000956;6.50e-15;25!UBERON:0000203;6.50e-15;25!UBERON:0001869;7.15e-13;32!UBERON:0002791;2.66e-11;32!UBERON:0001893;4.94e-11;34!UBERON:0003528;1.90e-10;34!UBERON:0002020;1.90e-10;34!UBERON:0002780;4.05e-08;41!UBERON:0001890;4.05e-08;41!UBERON:0001017;5.26e-08;75!UBERON:0001016;6.60e-08;83!UBERON:0000200;3.98e-07;6!UBERON:0002021;4.60e-07;5!UBERON:0000955;5.05e-07;68!UBERON:0000073;8.19e-07;53!UBERON:0002616;8.19e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.38e-16,89;UBERON:0002619,3.15e-16,22;UBERON:0001950,4.37e-16,20;UBERON:0000956,5.84e-15,25;UBERON:0000203,5.84e-15,25;UBERON:0004121,6.96e-15,171;UBERON:0000924,6.96e-15,171;UBERON:0006601,6.96e-15,171;UBERON:0001869,3.71e-14,32;UBERON:0001017,4.62e-14,81;UBERON:0001893,6.29e-13,34;UBERON:0002791,7.47e-13,32;UBERON:0003528,1.01e-11,34;UBERON:0002020,1.01e-11,34;UBERON:0002780,1.26e-11,41;UBERON:0001890,1.26e-11,41;UBERON:0003080,1.26e-11,41;UBERON:0006240,1.26e-11,41;UBERON:0000955,2.32e-11,68;UBERON:0006238,2.32e-11,68;UBERON:0001049,6.42e-11,56;UBERON:0005068,6.42e-11,56;UBERON:0006241,6.42e-11,56;UBERON:0007135,6.42e-11,56;UBERON:0000073,6.85e-11,53;UBERON:0002616,6.85e-11,53;UBERON:0002346,1.25e-10,86;UBERON:0003056,5.68e-10,61;UBERON:0003075,2.85e-09,82;UBERON:0007284,2.85e-09,82;UBERON:0010371,5.46e-09,104;UBERON:0010314,4.75e-08,132;UBERON:0011216,7.45e-08,223;UBERON:0000200,3.28e-07,6;UBERON:0002021,3.72e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.783556884599516,0.491467873003018,2.09340350391728,0.655324116390517,0.791300934685361,0.495065411840187,1.65698687863958,0,1.20538905604795,0.730310090387373,0.487932798790507,1.10808952269109,0.816002764977012,0.626909442956176,0.85870796139317,1.09499540058307,0.502170558379211,0.0764134057479513,0.0821005894499457,0.157421562627358,0.786728553697808,0,0.154816123316076,0,0.90361775633475,0,0,0,0,0,0.200544447470142,0,1.11957737119962,2.26725566213286,0.515151135268373,0.581592955118259,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.637812899895131,0.209658645508376,0.336985893439485,0,0.16072558669708,0,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,1.01392563272577,0.795285947051099,0.486634870302636,1.13441780596881,0.221729397462564,0.351339142772504,1.5062593682237,1.09288586487763,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0.347140501607594,2.26123176769604,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0.732186172644509,0,0,0.357198913136319,0.44905874525234,0.337834441449967,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,2.86836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0.908144565869588,1.15235184896,0.70296429550139,0.312160076830321,1.1409436430889,0.597794722207204,1.17434498643765,1.61872944368132,1.40450806702248,0.408308342509787,0.368502951935304,0.723280468230358,3.56400857184616,2.47266929278557,0.910161361938026,0,0.168336113954066,0.750711119231785,0.277064115484183,1.75591048352335,1.22595118319608,1.35214253015937,0.226864366320042,2.51145489964407,0.213557388818567,0,1.50045548042201,0.412210116953756,1.03056216018252,0.744467425326359,2.19409231913646,0.194874010322397,2.77677151668526,0.184099797284599,0.969876340912871,2.84007674013291,0.906768884048762,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.530119073285941,0.116193942869518,0.518305275076852,0,0,0,1.92972281457866,0,0.464367928031979,1.44375896333917,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0.548751427043128,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.469634776943287,0,0,0,4.74122638775565,0.858486162094873,1.72351904261178,0.468008530278475,1.63494278517601,0,0.335964256397719,0,0.179117045405697,0,0,0,0.088048434013226,0.829312462163088,0.144119953416961,0.37872730027914,0.571481048629521,1.14596527667483,0,0,0.102827492703324,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0.258543431515556,0,3.381211010224,0.531876233169741,0,0.514414748524284,1.41849132023278,0.532844358032199,0,1.62786481617433,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,1.09970290300263,4.86495122564762,2.00902836572851,4.21667878966063,0.239624855491583,2.29723871668228,2.85273810081437,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,4.8277978602268,6.50699269288109,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0.613457458595699,2.00068208423871,0.271265023699736,0.831883446123229,0.892144943985809,0.630809660135739,0.468565659970853,0,4.5481500811197,0,0,0.553107505625109,1.12948698808508,2.34961388955289,1.37257369524342,0,0,0.213455115606889,1.5156378572313,0,3.0239029332968,0.744323423456331,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0.925258162815933,0.710246901252508,0.492762936082855,1.03850885836724,0.348631135379878,0.120859449591622,0.200506470303285,0.460404944679482,0.34444334449382,0.546273504020151,0.917870904715969,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.541892875087706,1.00337954770971,0.509752546090077,0,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0,0.206082023295445,0.732555718546747,0.577566499444116,0,1.30012049207304,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.322260734604821,0,0.426133137080504,0.356128142586949,0,0,0.510450849978337,0.4046311234222,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.255897791311334,1.28381696410176,2.22742273548156,0,0.539617372749944,0.274537029736055,0,0.404364963146632,0,0.421258456238981,0.975267478179181,0,1.05650146756755,0.272999822815972,0.565621727814851,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,1.31717957183961,1.89736586882858,0.699869440489966,0.0962221127255121,0.670302275535787,2.17781969722645,0.282431402330337,0,1.68471475667626,0.443430153536676,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,1.28188885352968,1.92495971052672,1.22520107990516,0,0,0,0,0.399158742865633,0,0,0,0,1.36940807419915,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0.671028323677248,0.166849141711909,0,0,1.23087398947712,0,0.33307196799782,0,0.748562161632879,0.586032717087576,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0.614321404198464,0.994147647766298,0.703347082052564,0.111308705022906,0.329607748453519,0,0.996239941255349,0.276283915531148,1.51159648712566,1.32949287252801,0,0.933118762985422,0.179736702294654,0,0,0.591860433821602,0,1.11136990144637,4.84666373047609,1.66982576691332,9.98068990005971,1.82299432759663,2.44887999989348,0,0.227586896570999,0.508507300585533,1.41832609060762,1.37897349296586,4.66567381413207,1.56262495439963,0.885741385813839,0.844175070377856,0,1.10579259931225,2.65992857058193,1.53569778007781,0,1.25481369850743,1.38510465306835,0.341826167541004,0,0.0897576444097721,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0,0,0.216388639742091,0,1.23840590304675,1.22206028986725,0,0,0,0.539209063845416,0.802577647298789,0.937057782901357,0,0.978323094660449,0,1.18375320854817,1.20990716048664,7.03967351750127,1.64285107034069,0.450970258243478,2.90326935912292,0,0.661983911750998,0,0,0,0.138674673013139,0,0.293977192243133,0.174118413160805,1.57254001417827,1.0319161948297,0.19351266257817,0.146178634172371,0.0821154570532092,0.775912131907355,0.264768380074501,0.451961481561065,0.274083849293502,0.397429223405979,2.53243183823515,0.977756913674015,0.320635281006135,0.640358984218058,0.39961921916426,0.144090417154106,0.229073192331831,0.857974989309823,0.14405479798815,0.621262677827163,0.942776138467182,0.135904206073614,0.732219924186332,0.917983958726896,0,1.20084057741958,0.136905378891993,0,0.429765441419957,0,0,1.83328339209347,0,0,0.858452096273142,0,0.403100834920358,0.720599767084807,0,0.0787831823072236,0,0,0.492137407573744,0.169346664131569,3.97614844904652,0.544813624446302,0,0.137539436597234,0,0.2249738915515,0.77380195455795,2.00473536971481,5.03152031398899,0.709251365692784,4.82582210841983,0.422401346077626,0.35857467866569,0.767660789277781,0.714695326373367,0.662091970365432,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0.566560457600628,0.146552233678082,0,0.129282956361551,0.92562821219883,0.171086837884329,0,0.213574825135389,1.25763444079733,0.414239055347196,0.992332043623902,0,0,1.27668251554036,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0.785270481251171,1.77213635993397,3.53876168215693,2.003054891304,2.29363678276028,0.332787154610557,0.807253238237985,0,0.124980407962107,0.151649117541648,0,0,4.68334905806882,0.724605143054126,0.298509605773748,0.233713309847224,0,0,0.754703705257725,1.77962244319307,0,0.604923695052956,0.466311601748341,0.295710299979268,0.477890301491107,0,0.155262956876259,0.414706207840855,0,0,0,1.14241563650639,0,0.181848659202559,0.107410557042488,0.928067519756987,1.19428766609585,0,0.686791410365586,0.336749488765919,3.78554694685953,0,0.643324774124777,0,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,1.23520578864389,0.877136198314828,0,0.38582807654183,0.337884881306145,0.256241518587947,0.345430341731199,0,1.24432592536558,0,0.132864840313363,0.163565394255844,0.982829546539238,0.737318726261158,0.633936370075881,0,0.106691729694141,0.688859918643263,0,1.10463570151104,0,0,0.895260599125562,1.94084660514027,2.04445724412665,1.96577348745625,1.18812770967818,2.55089904122019,2.10690799240304,12.2901881954114,0.318004350653419,0,0,0.352675943690684,0.3062454773532,1.60573062741149,1.41696576325585,3.35231104020018,2.66651273512982,9.07458106398185,2.35134658378341,2.74508597574147,4.28308260777463,0,0.235939446695481,1.46742878817343,0.924205329202706,0,4.1421595563606,0.795664888465099,1.72983755203292,0.20170506870352,0,0.261906694481422,0.327543835020193,1.18284868973636,1.35075169236789,1.56215619722769,1.2401207790071,0.824405532520789,11.4864709893826,1.09651553371436,0,0.527613733078862,0.766574565837572,1.07140367175657,0.672567444437648,1.82089681270989,0.455324382702595,0.266107110487916,0.115233987555779,0.685952037749674,0.339848664884159,2.36781984826257,0.118193840883968,0.222462803784138,0.39246546425257,0.314231179832004,0.280272163313789,4.56579360254748,0.431855182437243,0.47775168788705,1.1436247068265,1.58013611732727,1.04617282831313,0.695433089210318,0,0.207216164163037,0.17071847709395,2.07377898544228,0.430227358820278,0.118332000730565,0.255640214277473,0.846774100381858,0.68732060563215,0,0,0,0.098150233615243,0.487671699929078,0.647428837187895,1.12929087541872,2.3196288626764,2.4285549652957,0.701818390386317,1.59160620129095,0.594600453887843,1.01651473835064,0,0.754814217833368,1.46630900405095,1.5299169235277,2.35158648180761,1.47088993052343,1.17838273550813,0.785233868459781,0,2.5359343655004,0.339854229375634,0.939839179798536,0.322289439867886,0,0.178553938605658,0.352894871715692,1.5245859670942,0.730336388246517,0,0,3.78651749263643,1.76777874496378,7.85431242612679,1.5870805215462,0.371995018166751,0.462175628631418,0.432626562123789,0,0.327796715891087,0.633492505057185,0.61193297845189,0.26721740526556,0.459474497674225,2.25636785363138,1.06090177505535,1.33982065078089,0,0.413731983447581,0.852935927603924,3.33290204049236,0.322944549180031,0.31037357147929,0.112131862580613,0.572824424503484,5.05292972395548,1.30630048738177,1.36893320434112,0.5388164241167,0.215166616178029,1.99596213927608,0.89543595472072,0.213454691755431,0,0.359300808426348,2.34640942403454,0.855690109280065,1.22068853494722,0,0.402547587182052,0 | |||
|short_description=p9@TNRC18 | |||
}} |
Revision as of 15:33, 22 January 2014
Short description: | p9@TNRC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TNRC18_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000399434, uc003sok.1_5end |
EntrezGene: | TNRC18 |
HGNC: | 11962 |
UniProt: | A8MTZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.13e-07 | 10 |