FFCP PHASE1:Hg19::chr8:102504651..102504683,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79977 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2799 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ISB3 | |||
|association_with_transcript=0bp_to_ENST00000251808,ENST00000472106,ENST00000521085,NM_024915,uc010mbt.1,uc010mbu.2,uc011lhi.1_5end | |||
|coexpression_cluster_id=C1541 | |||
|description=CAGE_peak_1_at_GRHL2_5end | |||
|id=chr8:102504651..102504683,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.59e-24!254;CL:0002076!2.85e-20!43;CL:0000223!1.38e-16!59;CL:0002251!2.87e-10!21;CL:0002368!2.53e-09!13;CL:0002159!4.71e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.69e-17;42!CL:0002368;2.35e-10;13!CL:0002251;6.94e-10;20!CL:0000349;1.90e-07;19!CL:0002159;4.71e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.12e-23,253;CL:0002076,3.32e-21,42;CL:0000223,7.33e-16,58;CL:0002368,2.70e-10,13;CL:0002251,7.02e-10,20;CL:0000349,1.90e-07,19;CL:0002159,4.55e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-08;58!UBERON:0006595;6.11e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.20e-16!106;DOID:1749!1.79e-15!14;DOID:0050687!2.53e-10!143;DOID:299!7.60e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.47e-15;14!DOID:299;4.08e-10;25!DOID:5093;7.71e-07;4!DOID:1612;7.71e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-16,106;DOID:1749,2.47e-15,14;DOID:0050687,1.27e-10,143;DOID:299,4.13e-10,25;DOID:5093,7.55e-07,4;DOID:1612,7.55e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.31e-26!169;UBERON:0000925!2.31e-26!169;UBERON:0006595!2.31e-26!169;UBERON:0001007!2.13e-19!155;UBERON:0001555!2.13e-19!155;UBERON:0007026!2.13e-19!155;UBERON:0004921!1.81e-16!129;UBERON:0004185!1.81e-16!129;UBERON:0000077!2.22e-15!130;UBERON:0000464!5.61e-15!104;UBERON:0001004!9.31e-14!72;UBERON:0000466!1.57e-13!126;UBERON:0005631!2.53e-12!14;UBERON:0000158!2.53e-12!14;UBERON:0005911!1.23e-10!82;UBERON:0000161!6.65e-10!35;UBERON:0003124!2.85e-09!7;UBERON:0005153!3.08e-09!37;UBERON:0005156!3.25e-09!59;UBERON:0000990!3.25e-09!59;UBERON:0001041!4.56e-09!98;UBERON:0000344!7.60e-09!12;UBERON:0005181!8.45e-09!35;UBERON:0000065!1.06e-08!53;UBERON:0003133!2.03e-08!48;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0002553!5.39e-08!70;UBERON:0000166!5.44e-08!21;UBERON:0000915!6.03e-08!52;UBERON:0004175!9.71e-08!25;UBERON:0000062!1.20e-07!511;UBERON:0005409!1.39e-07!35;UBERON:0005177!1.54e-07!107;UBERON:0000160!5.97e-07!27;UBERON:0003135!6.02e-07!11;UBERON:0000468!8.51e-07!659;UBERON:0003729!8.97e-07!5;UBERON:0003101!9.26e-07!22;UBERON:0000079!9.26e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.80e-10;33!UBERON:0005631;6.82e-09;10!UBERON:0000158;6.82e-09;10!UBERON:0005178;1.27e-08;34!UBERON:0002224;1.27e-08;34!UBERON:0005409;2.21e-08;22!UBERON:0000974;3.16e-08;6!UBERON:0000344;3.48e-08;20!UBERON:0005911;4.98e-08;36!UBERON:0001555;7.22e-08;54!UBERON:0005181;7.94e-08;35!UBERON:0004807;1.99e-07;22!UBERON:0000478;2.08e-07;24!UBERON:0002048;2.17e-07;22!UBERON:0000117;2.17e-07;22!UBERON:0000171;2.17e-07;22!UBERON:0000170;2.17e-07;22!UBERON:0000160;4.29e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.38e-26,160;UBERON:0000925,4.38e-26,160;UBERON:0006595,4.38e-26,160;UBERON:0001007,7.74e-19,145;UBERON:0001555,7.74e-19,145;UBERON:0007026,7.74e-19,145;UBERON:0004921,1.48e-15,118;UBERON:0005631,1.01e-13,14;UBERON:0000158,1.01e-13,14;UBERON:0001004,4.04e-13,74;UBERON:0005911,1.65e-11,82;UBERON:0005153,1.16e-10,37;UBERON:0003124,3.55e-10,7;UBERON:0000065,6.22e-10,54;UBERON:0005178,1.09e-09,34;UBERON:0002224,1.09e-09,34;UBERON:0005181,3.04e-09,35;UBERON:0000161,4.27e-09,36;UBERON:0001008,6.34e-09,48;UBERON:0005157,9.07e-09,47;UBERON:0000915,1.01e-08,52;UBERON:0006554,1.72e-08,47;UBERON:0005156,3.21e-08,59;UBERON:0000990,3.21e-08,59;UBERON:0000344,3.57e-08,20;UBERON:0001041,5.51e-08,87;UBERON:0004175,6.78e-08,25;UBERON:0000478,2.11e-07,24;UBERON:0002048,2.32e-07,22;UBERON:0000117,2.32e-07,22;UBERON:0000171,2.32e-07,22;UBERON:0000170,2.32e-07,22;UBERON:0005597,2.32e-07,22;UBERON:0000118,2.32e-07,22;UBERON:0000160,3.80e-07,17;UBERON:0003133,4.15e-07,48;UBERON:0005409,5.60e-07,25;UBERON:0000974,5.87e-07,10;UBERON:0005177,9.07e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,11.0580271425679,11.8626198555313,47.4017777522474,50.1157258634062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,1.83884244895785,10.5422071572388,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.94702919869853,10.5645633604837,17.4268688108682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,12.6467275121335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66304265816484,13.0918137883601,12.6194021971162,8.0502646045533,7.81925633096763,5.22872742912833,2.798848485415,7.82194637714448,8.75945661781992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,25.0896414627952,0,11.7432805387229,12.3641928583382,11.6613607997492,18.5176890317059,0,0,0,0,0,0,0,0,48.9926726734751,42.0658219426488,0,0,0,5.62403003920662,6.55130299975552,6.238104278665,4.11969204433102,6.39394664730716,11.1180976957911,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,31.2221398589647,38.2801510874143,50.8015692793863,0,0,0,0,0,0,0,0,0,0,0,0,21.2712631281255,10.6268429260741,13.7200673514486,0,0,0,1.35359883872224,2.6185214615501,0.784349769176855,0,1.05551628892876,0,0,0,0,0,0.501689773854853,3.3133915495855,2.49322802678617,0.671624264166535,0,0,0,0,0,17.9291360267037,0,0,11.4853107599234,16.9015663969496,0,0,0,0,0,0,0,0,0,12.2310837367124,12.3001643113668,48.1099926104582,18.0060849922879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2786515561207,11.3951386841084,6.53345909167936,15.6278709289453,10.3321289441095,10.1082885400575,11.9726141454902,12.8645104115897,0,0,0,0,0,0,0,0,0,0,41.1667562848133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5797080914357,0,0,0,0,52.2850421575541,65.6291944640131,33.1733558267171,0,0,0,0,0.211125408127993,5.18044769452781,4.42054264849836,0.503865495708552,0,0,0,28.308530611408,48.8727806864413,0,3.55116260292961,0,0,0,0,0,44.7935749066601,47.6656999979267,15.2249910841307,33.9104475890789,31.0189453357175,36.1673153104943,0,0,0,0,0,0,0,0,0,0,26.2116639243774,5.46346835376959,0,7.83917274919404,8.61673386333812,28.7915535593321,50.7211843973752,17.7699331199613,35.7133299932485,0,0,0,0,0,0,0,0,0,28.5657414278509,31.3803818583349,0,26.8720721391196,12.8263468529842,20.7750249277433,0,0,0,0,0.802577647298789,0,0,37.5676068349612,0,31.1721678251019,19.3585145677862,0,0,0,0,0,0,0,0,11.3843818411917,0,22.9098854602373,39.6869209528229,24.8989330819951,14.3275867958465,0,0,0,0,16.5851218195197,0,4.06765333404958,0,0,0,27.3771935828724,4.72937039484049,13.6609916633186,0,28.0976313450507,0,0,0,0,29.6974483617162,0,0,0,0,0,0,0,0,0,0,0,0,20.1675790503981,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,18.4866120734772,18.1552056308349,17.0330538591966,0,7.7380195455795,0.121499113316049,21.467820006353,7.64415360802222,15.1069213828795,0,0,24.9489756515279,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,28.1926008926669,8.1158433551448,6.13096789888697,19.054996545971,0,0,0,43.4072055283724,0,0,0,0,29.8402782875445,0,0,0,0,0,0,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7502183621247,0,0,0,0,0,10.9106016021167,11.8194679406265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.7368368214779,32.9135528140196,24.3960036033833,34.3111228466504,0,0,0,2.1058891937792,0,26.5714763819251,19.6430020861067,0,30.3104976744943,0.0675375846183947,0,0,0.0634158101939068,0,15.8994752388583,4.96211178389294,0,39.9896398511933,0,0,1.21393120847326,1.36597314810779,40.0934713135128,0,0,0.0679697329768317,0,0,17.3520986951628,16.8760149628605,0,31.9510266177719,5.47895232305697,0,0,0,0,0,0,0,0.62164849248911,0,0.691259661814092,14.6277301998894,0,0,43.1854791194748,16.2665876666276,0,0,23.4896406775364,16.5873894809761,16.8246736475532,0,0,0,20.3998617084839,0,0,0,29.8177656582854,0,3.17021971490014,10.9587304513281,6.99390593612663,2.82190377816914,0.980593287015622,9.66273843116666,0,0,0,0,0,0.128915775947154,0,41.7816216337239,14.1157948686277,33.5408912760723,16.0674005414234,19.7253591863953,0,0,0,0.436350690340377,10.580536810308,0,0,0,0,0.874124575709564,0,6.22131861426089,9.88704399482574,0.918948995348449,6.76910356089413,0.757786982182394,0.267964130156178,0,0,12.7940389140589,20.7116055373454,1.93766729508018,3.35203457197633,0,16.1027310443757,27.690054887276,11.9744211343329,6.84466602170562,10.3048641112319,16.6395516511009,17.6309988969387,27.3514982532874,0,0,0.538951212639521,7.03922827210363,1.58913877437726,4.88275413978886,2.66302709674205,1.40891655513718,0 | |||
|short_description=p1@GRHL2 | |||
}} |
Revision as of 23:10, 22 January 2014
Short description: | p1@GRHL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRHL2_5end |
Coexpression cluster: | C1541_amniotic_Amniotic_MCF7_Placental_chorionic_oral_acantholytic |
Association with transcript: | 0bp_to_ENST00000251808, ENST00000472106, ENST00000521085, NM_024915, uc010mbt.1, uc010mbu.2, uc011lhi.1_5end |
EntrezGene: | GRHL2 |
HGNC: | 2799 |
UniProt: | Q6ISB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.12e-23 | 253 |
endo-epithelial cell | 3.32e-21 | 42 |
endodermal cell | 7.33e-16 | 58 |
respiratory epithelial cell | 2.70e-10 | 13 |
epithelial cell of alimentary canal | 7.02e-10 | 20 |
extraembryonic cell | 1.90e-07 | 19 |
general ecto-epithelial cell | 4.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-16 | 106 |
squamous cell carcinoma | 2.47e-15 | 14 |
cell type cancer | 1.27e-10 | 143 |
adenocarcinoma | 4.13e-10 | 25 |
thoracic cancer | 7.55e-07 | 4 |
breast cancer | 7.55e-07 | 4 |