FFCP PHASE1:Hg19::chr10:102269050..102269066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:102269050..102269066,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_at_chr10:102269050..102269066,- | |description=CAGE_peak_at_chr10:102269050..102269066,- | ||
|id=chr10:102269050..102269066,- | |id=chr10:102269050..102269066,- | ||
|ontology_enrichment_celltype=CL:0000084!3.57e-44!25;CL:0000827!3.57e-44!25;CL:0000791!5.12e-31!18;CL:0000789!5.12e-31!18;CL:0002420!5.12e-31!18;CL:0002419!5.12e-31!18;CL:0000790!5.12e-31!18;CL:0000838!2.28e-22!52;CL:0000542!8.68e-22!53;CL:0000051!8.68e-22!53;CL:0000625!4.96e-18!11;CL:0000988!1.75e-15!182;CL:0000037!2.75e-14!172;CL:0000566!2.75e-14!172;CL:0000624!1.42e-12!6;CL:0000080!1.57e-12!6;CL:0002087!4.71e-12!119;CL:0000738!3.67e-11!140;CL:0002032!3.78e-11!165;CL:0000837!3.78e-11!165;CL:0002031!9.94e-09!124;CL:0000898!2.09e-07!3;CL:0000842!7.46e-07!3 | |ontology_enrichment_celltype=CL:0000084!3.57e-44!25;CL:0000827!3.57e-44!25;CL:0000791!5.12e-31!18;CL:0000789!5.12e-31!18;CL:0002420!5.12e-31!18;CL:0002419!5.12e-31!18;CL:0000790!5.12e-31!18;CL:0000838!2.28e-22!52;CL:0000542!8.68e-22!53;CL:0000051!8.68e-22!53;CL:0000625!4.96e-18!11;CL:0000988!1.75e-15!182;CL:0000037!2.75e-14!172;CL:0000566!2.75e-14!172;CL:0000624!1.42e-12!6;CL:0000080!1.57e-12!6;CL:0002087!4.71e-12!119;CL:0000738!3.67e-11!140;CL:0002032!3.78e-11!165;CL:0000837!3.78e-11!165;CL:0002031!9.94e-09!124;CL:0000898!2.09e-07!3;CL:0000842!7.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.05e-60;25!CL:0000791;8.13e-52;18!CL:0000789;8.13e-52;18!CL:0002419;8.13e-52;18!CL:0000625;9.85e-31;11!CL:0000624;3.00e-18;6!CL:0000542;2.09e-15;53!CL:0000898;3.48e-14;3!CL:0000815;6.07e-10;2!CL:0000792;6.07e-10;2!CL:0002677;6.07e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.91e-60,25;CL:0000827,2.91e-60,25;CL:0000791,7.05e-52,18;CL:0000789,7.05e-52,18;CL:0002420,7.05e-52,18;CL:0002419,7.05e-52,18;CL:0000790,7.05e-52,18;CL:0000625,7.02e-31,11;CL:0000838,1.26e-26,52;CL:0000542,4.88e-26,53;CL:0000051,4.88e-26,53;CL:0000624,3.68e-18,6;CL:0000898,3.26e-14,3;CL:0002087,4.85e-12,115;CL:0000988,5.44e-11,177;CL:0000738,1.15e-10,136;CL:0000893,1.33e-10,2;CL:0002489,1.33e-10,2;CL:0000809,1.33e-10,2;CL:0000808,1.33e-10,2;CL:0000894,1.33e-10,2;CL:0000806,1.33e-10,2;CL:0000807,1.33e-10,2;CL:0000805,1.33e-10,2;CL:0002425,1.33e-10,2;CL:0000815,6.36e-10,2;CL:0000792,6.36e-10,2;CL:0002677,6.36e-10,2;CL:0002031,5.71e-09,120;CL:0000037,1.08e-08,168 | |||
|ontology_enrichment_development_v019=CL:0000790;8.13e-52;18!CL:0000051;2.09e-15;53!CL:0002425;1.49e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!3.05e-09!51;DOID:0060083!3.05e-09!51;DOID:1240!6.14e-09!39;DOID:1036!6.12e-08!8 | |ontology_enrichment_disease=DOID:2531!3.05e-09!51;DOID:0060083!3.05e-09!51;DOID:1240!6.14e-09!39;DOID:1036!6.12e-08!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.66e-17!15;UBERON:0000179!4.66e-17!15;UBERON:0000463!4.66e-17!15;UBERON:0004177!1.85e-10!7;UBERON:0002370!1.78e-09!4;UBERON:0005058!1.78e-09!4;UBERON:0009113!1.78e-09!4;UBERON:0003295!1.78e-09!4;UBERON:0005562!1.78e-09!4;UBERON:0003408!4.10e-07!10;UBERON:0001042!5.68e-07!10;UBERON:0009145!5.68e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.02e-09;2!UBERON:0005058;1.02e-09;2!UBERON:0009113;1.02e-09;2!UBERON:0000178;4.41e-07;15!UBERON:0000179;4.41e-07;15!UBERON:0000463;4.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.10e-18,4;UBERON:0005058,1.10e-18,4;UBERON:0009113,1.10e-18,4;UBERON:0003295,1.10e-18,4;UBERON:0005562,1.10e-18,4;UBERON:0003351,1.69e-12,6;UBERON:0004177,1.00e-10,7;UBERON:0005057,1.00e-10,7;UBERON:0000974,1.61e-07,10;UBERON:0003408,1.61e-07,10;UBERON:0001042,1.61e-07,10;UBERON:0009145,1.61e-07,10;UBERON:0000178,3.74e-07,15;UBERON:0000179,3.74e-07,15;UBERON:0000463,3.74e-07,15;UBERON:0006562,7.71e-07,11;UBERON:0009722,7.71e-07,11;UBERON:0007690,7.71e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.786839080455332,1.17903228824749,1.02800749499755,67.543344137834,5.21475626613745,3.78758244587787,0,7.5759110681918,1.17842362989935,1.10766947291811,3.24964636518019,23.9530767887013,24.0609792985775,18.4170453156117,19.0681512272235,35.6457795454115,4.30031033169975,2.1403266247177,0,17.9028761462155,3.83220493601921,1.03088233644789,1.01207876807801,0.95569624297229,1.30216690771284,2.85135613334512,1.95747654801105,1.15187950038977,2.49861453104692,1.18388626022008,0,2.01606743224732,2.40696176205157,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0365774853663,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.3437622449772,0.985153801009636,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.952927101831156,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0.924843963529383,10.2032814546446,0.199579371432817,0,0,0,0.561594356226918,0,0,5.01268954180134,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,6.12938613526131,0,0,0,0,0,0,0,36.9160678267941,0,0,0.552567831062295,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,3.06579894587209,0,0,0.225595660617181,0,0.167821586975843,0.37950746544837,0.953619473882272,0,0,0,0,0,0,0.611030144933625,2.07564790076435,1.97702302314405,3.23708043466912,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0.78602152549833,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,1.93766729508018,2.29676442894674,0,0,0,0.217716747896961,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p@chr10:102269050..102269066,- | |short_description=p@chr10:102269050..102269066,- | ||
}} | }} |
Latest revision as of 09:33, 23 July 2015
Short description: | p@chr10:102269050..102269066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:102269050..102269066, - |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.91e-60 | 25 |
pro-T cell | 2.91e-60 | 25 |
mature alpha-beta T cell | 7.05e-52 | 18 |
alpha-beta T cell | 7.05e-52 | 18 |
immature T cell | 7.05e-52 | 18 |
mature T cell | 7.05e-52 | 18 |
immature alpha-beta T cell | 7.05e-52 | 18 |
CD8-positive, alpha-beta T cell | 7.02e-31 | 11 |
lymphoid lineage restricted progenitor cell | 1.26e-26 | 52 |
lymphocyte | 4.88e-26 | 53 |
common lymphoid progenitor | 4.88e-26 | 53 |
CD4-positive, alpha-beta T cell | 3.68e-18 | 6 |
naive T cell | 3.26e-14 | 3 |
nongranular leukocyte | 4.85e-12 | 115 |
hematopoietic cell | 5.44e-11 | 177 |
leukocyte | 1.15e-10 | 136 |
thymocyte | 1.33e-10 | 2 |
double negative thymocyte | 1.33e-10 | 2 |
double-positive, alpha-beta thymocyte | 1.33e-10 | 2 |
DN4 thymocyte | 1.33e-10 | 2 |
DN1 thymic pro-T cell | 1.33e-10 | 2 |
DN2 thymocyte | 1.33e-10 | 2 |
DN3 thymocyte | 1.33e-10 | 2 |
immature single positive thymocyte | 1.33e-10 | 2 |
early T lineage precursor | 1.33e-10 | 2 |
regulatory T cell | 6.36e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.36e-10 | 2 |
naive regulatory T cell | 6.36e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 5.71e-09 | 120 |
hematopoietic stem cell | 1.08e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.10e-18 | 4 |
hemolymphoid system gland | 1.10e-18 | 4 |
thymic region | 1.10e-18 | 4 |
pharyngeal gland | 1.10e-18 | 4 |
thymus primordium | 1.10e-18 | 4 |
pharyngeal epithelium | 1.69e-12 | 6 |
hemopoietic organ | 1.00e-10 | 7 |
immune organ | 1.00e-10 | 7 |
neck | 1.61e-07 | 10 |
gland of gut | 1.61e-07 | 10 |
chordate pharynx | 1.61e-07 | 10 |
pharyngeal region of foregut | 1.61e-07 | 10 |
blood | 3.74e-07 | 15 |
haemolymphatic fluid | 3.74e-07 | 15 |
organism substance | 3.74e-07 | 15 |
pharynx | 7.71e-07 | 11 |
entire pharyngeal arch endoderm | 7.71e-07 | 11 |
early pharyngeal endoderm | 7.71e-07 | 11 |