FFCP PHASE1:Hg19::chr10:135150367..135150441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=50632 | |EntrezGene=entrezgene:50632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17938 | |HGNC=HGNC:17938 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9NYX4 | |UniProt=uniprot:Q9NYX4 | ||
|association_with_transcript=0bp_to_ENST00000252939,ENST00000368555,ENST00000368558_5end | |association_with_transcript=0bp_to_ENST00000252939,ENST00000368555,ENST00000368558_5end | ||
|cluster_id=chr10:135150367..135150441,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_CALY_5end | |description=CAGE_peak_1_at_CALY_5end |
Revision as of 11:53, 23 July 2015
Short description: | p1@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALY_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000252939, ENST00000368555, ENST00000368558_5end |
EntrezGene: | 50632 |
HGNC: | 17938 |
UniProt: | Q9NYX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@CALY |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.61e-16 | 18 |
alpha-beta T cell | 8.61e-16 | 18 |
immature T cell | 8.61e-16 | 18 |
mature T cell | 8.61e-16 | 18 |
immature alpha-beta T cell | 8.61e-16 | 18 |
CD8-positive, alpha-beta T cell | 1.63e-10 | 11 |
T cell | 3.34e-10 | 25 |
pro-T cell | 3.34e-10 | 25 |
CD4-positive, alpha-beta T cell | 3.74e-08 | 6 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 2.21e-68 | 56 |
neural rod | 2.21e-68 | 56 |
future spinal cord | 2.21e-68 | 56 |
neural keel | 2.21e-68 | 56 |
regional part of nervous system | 6.51e-64 | 53 |
regional part of brain | 6.51e-64 | 53 |
central nervous system | 5.11e-60 | 81 |
nervous system | 3.46e-56 | 89 |
regional part of forebrain | 5.66e-55 | 41 |
forebrain | 5.66e-55 | 41 |
Showing 1 to 10 of 64 entries