FFCP PHASE1:Hg19::chr10:52213807..52213811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:52213807..52213811,- | |||
|description=CAGE_peak_at_chr10:52213807..52213811,- | |description=CAGE_peak_at_chr10:52213807..52213811,- | ||
|id=chr10:52213807..52213811,- | |id=chr10:52213807..52213811,- | ||
|ontology_enrichment_celltype=CL:0002087!8.66e-11!119;CL:0002031!4.39e-10!124;CL:0000037!4.40e-10!172;CL:0000566!4.40e-10!172;CL:0002032!5.65e-10!165;CL:0000837!5.65e-10!165;CL:0000542!1.27e-09!53;CL:0000051!1.27e-09!53;CL:0000838!2.54e-09!52;CL:0000988!4.79e-09!182;CL:0000738!6.02e-09!140 | |ontology_enrichment_celltype=CL:0002087!8.66e-11!119;CL:0002031!4.39e-10!124;CL:0000037!4.40e-10!172;CL:0000566!4.40e-10!172;CL:0002032!5.65e-10!165;CL:0000837!5.65e-10!165;CL:0000542!1.27e-09!53;CL:0000051!1.27e-09!53;CL:0000838!2.54e-09!52;CL:0000988!4.79e-09!182;CL:0000738!6.02e-09!140 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.16e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.40e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-27!115;UBERON:0001049!3.47e-11!57;UBERON:0005068!3.47e-11!57;UBERON:0006241!3.47e-11!57;UBERON:0007135!3.47e-11!57;UBERON:0003080!5.13e-10!42;UBERON:0002780!8.92e-10!41;UBERON:0001890!8.92e-10!41;UBERON:0006240!8.92e-10!41;UBERON:0002616!2.58e-08!59;UBERON:0000955!3.14e-08!69;UBERON:0006238!3.14e-08!69;UBERON:0001017!1.54e-07!82;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0001893!2.41e-07!34;UBERON:0002791!5.59e-07!33;UBERON:0000073!5.74e-07!94;UBERON:0001016!5.74e-07!94;UBERON:0005743!6.95e-07!86;UBERON:0002346!8.20e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!5.54e-27!115;UBERON:0001049!3.47e-11!57;UBERON:0005068!3.47e-11!57;UBERON:0006241!3.47e-11!57;UBERON:0007135!3.47e-11!57;UBERON:0003080!5.13e-10!42;UBERON:0002780!8.92e-10!41;UBERON:0001890!8.92e-10!41;UBERON:0006240!8.92e-10!41;UBERON:0002616!2.58e-08!59;UBERON:0000955!3.14e-08!69;UBERON:0006238!3.14e-08!69;UBERON:0001017!1.54e-07!82;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0001893!2.41e-07!34;UBERON:0002791!5.59e-07!33;UBERON:0000073!5.74e-07!94;UBERON:0001016!5.74e-07!94;UBERON:0005743!6.95e-07!86;UBERON:0002346!8.20e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.99e-10;9!UBERON:0002308;1.99e-10;9!UBERON:0002298;9.08e-09;6!UBERON:0000073;2.79e-08;53!UBERON:0002616;2.79e-08;53!UBERON:0009663;3.39e-08;7!UBERON:0002420;4.00e-08;9!UBERON:0007245;4.00e-08;9!UBERON:0010009;4.00e-08;9!UBERON:0010011;4.00e-08;9!UBERON:0000454;4.00e-08;9!UBERON:0002784;7.04e-08;4!UBERON:0002780;2.25e-07;41!UBERON:0001890;2.25e-07;41!UBERON:0007023;2.33e-07;114!UBERON:0000369;5.88e-07;4!UBERON:0002435;5.88e-07;4!UBERON:0000204;5.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.15e-21,114;UBERON:0001049,3.99e-14,56;UBERON:0005068,3.99e-14,56;UBERON:0006241,3.99e-14,56;UBERON:0007135,3.99e-14,56;UBERON:0000073,6.96e-13,53;UBERON:0002616,6.96e-13,53;UBERON:0003075,9.15e-12,82;UBERON:0007284,9.15e-12,82;UBERON:0002346,9.30e-12,86;UBERON:0000125,1.35e-10,9;UBERON:0002308,1.35e-10,9;UBERON:0000955,5.75e-10,68;UBERON:0006238,5.75e-10,68;UBERON:0001017,1.37e-09,81;UBERON:0002780,3.57e-09,41;UBERON:0001890,3.57e-09,41;UBERON:0003080,3.57e-09,41;UBERON:0006240,3.57e-09,41;UBERON:0002298,7.86e-09,6;UBERON:0001016,1.02e-08,89;UBERON:0010371,3.80e-08,104;UBERON:0009663,4.66e-08,7;UBERON:0002420,7.31e-08,9;UBERON:0007245,7.31e-08,9;UBERON:0010009,7.31e-08,9;UBERON:0010011,7.31e-08,9;UBERON:0000454,7.31e-08,9;UBERON:0002784,8.64e-08,4;UBERON:0003056,5.67e-07,61 | |||
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| ||
|short_description=p@chr10:52213807..52213811,- | |short_description=p@chr10:52213807..52213811,- | ||
}} | }} |
Latest revision as of 14:05, 23 July 2015
Short description: | p@chr10:52213807..52213811, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52213807..52213811, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.16e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.15e-21 | 114 |
neural tube | 3.99e-14 | 56 |
neural rod | 3.99e-14 | 56 |
future spinal cord | 3.99e-14 | 56 |
neural keel | 3.99e-14 | 56 |
regional part of nervous system | 6.96e-13 | 53 |
regional part of brain | 6.96e-13 | 53 |
neural plate | 9.15e-12 | 82 |
presumptive neural plate | 9.15e-12 | 82 |
neurectoderm | 9.30e-12 | 86 |
neural nucleus | 1.35e-10 | 9 |
nucleus of brain | 1.35e-10 | 9 |
brain | 5.75e-10 | 68 |
future brain | 5.75e-10 | 68 |
central nervous system | 1.37e-09 | 81 |
regional part of forebrain | 3.57e-09 | 41 |
forebrain | 3.57e-09 | 41 |
anterior neural tube | 3.57e-09 | 41 |
future forebrain | 3.57e-09 | 41 |
brainstem | 7.86e-09 | 6 |
nervous system | 1.02e-08 | 89 |
ecto-epithelium | 3.80e-08 | 104 |
telencephalic nucleus | 4.66e-08 | 7 |
basal ganglion | 7.31e-08 | 9 |
nuclear complex of neuraxis | 7.31e-08 | 9 |
aggregate regional part of brain | 7.31e-08 | 9 |
collection of basal ganglia | 7.31e-08 | 9 |
cerebral subcortex | 7.31e-08 | 9 |
regional part of diencephalon | 8.64e-08 | 4 |
pre-chordal neural plate | 5.67e-07 | 61 |