FFCP PHASE1:Hg19::chr10:5334612..5334640,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5334612..5334640,+ | |||
|description=CAGE_peak_at_chr10:5334612..5334640,+ | |description=CAGE_peak_at_chr10:5334612..5334640,+ | ||
|id=chr10:5334612..5334640,+ | |id=chr10:5334612..5334640,+ | ||
|ontology_enrichment_celltype=CL:0000860;7.50e-65;33!CL:0002057;7.50e-65;33!CL:0000473;7.36e-45;39!CL:0000234;7.36e-45;39!CL:0000576;5.39e-30;48!CL:0000624;1.96e-15;6!CL:0000766;6.63e-15;69!CL:0002087;3.79e-13;104!CL:0000898;5.82e-12;3!CL:0000791;9.19e-12;18!CL:0000789;9.19e-12;18!CL:0002419;9.19e-12;18!CL:0000084;3.21e-10;25!CL:0000763;1.31e-09;100!CL:0000738;1.20e-08;136!CL:0000815;2.50e-08;2!CL:0000792;2.50e-08;2!CL:0002677;2.50e-08;2 | |ontology_enrichment_celltype=CL:0002057!3.79e-36!42;CL:0002087!4.30e-36!119;CL:0000738!1.39e-35!140;CL:0000037!5.15e-33!172;CL:0000566!5.15e-33!172;CL:0000860!5.42e-33!45;CL:0002032!2.23e-30!165;CL:0000837!2.23e-30!165;CL:0000988!5.13e-30!182;CL:0002031!9.50e-30!124;CL:0000766!1.93e-26!76;CL:0002194!9.75e-26!63;CL:0000576!9.75e-26!63;CL:0000040!9.75e-26!63;CL:0000559!9.75e-26!63;CL:0002009!1.34e-24!65;CL:0000839!4.79e-22!70;CL:0000557!1.40e-21!71;CL:0000763!5.41e-21!112;CL:0000049!5.41e-21!112;CL:0000791!1.95e-15!18;CL:0000789!1.95e-15!18;CL:0002420!1.95e-15!18;CL:0002419!1.95e-15!18;CL:0000790!1.95e-15!18;CL:0000084!6.59e-15!25;CL:0000827!6.59e-15!25;CL:0000624!8.89e-11!6;CL:0000838!4.74e-09!52;CL:0000542!8.99e-09!53;CL:0000051!8.99e-09!53;CL:0000134!6.74e-08!358;CL:0002320!2.10e-07!365 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;7.50e-65;33!CL:0002057;7.50e-65;33!CL:0000473;7.36e-45;39!CL:0000234;7.36e-45;39!CL:0000576;5.39e-30;48!CL:0000624;1.96e-15;6!CL:0000766;6.63e-15;69!CL:0002087;3.79e-13;104!CL:0000898;5.82e-12;3!CL:0000791;9.19e-12;18!CL:0000789;9.19e-12;18!CL:0002419;9.19e-12;18!CL:0000084;3.21e-10;25!CL:0000763;1.31e-09;100!CL:0000738;1.20e-08;136!CL:0000815;2.50e-08;2!CL:0000792;2.50e-08;2!CL:0002677;2.50e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.00e-54,42;CL:0002057,1.00e-54,42;CL:0000473,4.79e-47,48;CL:0000234,4.79e-47,48;CL:0002194,2.66e-36,59;CL:0000576,2.66e-36,59;CL:0000040,2.66e-36,59;CL:0000559,2.66e-36,59;CL:0002009,6.47e-35,61;CL:0002087,2.03e-33,115;CL:0000839,8.17e-32,66;CL:0002031,1.11e-31,120;CL:0000557,3.00e-31,67;CL:0000766,1.18e-28,72;CL:0000738,5.70e-27,136;CL:0002032,1.76e-21,161;CL:0000837,1.76e-21,161;CL:0000037,3.09e-20,168;CL:0000988,8.79e-19,177;CL:0000763,4.83e-17,108;CL:0000049,4.83e-17,108;CL:0000624,1.66e-15,6;CL:0000898,5.11e-12,3;CL:0000791,6.82e-12,18;CL:0000789,6.82e-12,18;CL:0002420,6.82e-12,18;CL:0002419,6.82e-12,18;CL:0000790,6.82e-12,18;CL:0000084,2.80e-10,25;CL:0000827,2.80e-10,25;CL:0000815,2.00e-08,2;CL:0000792,2.00e-08,2;CL:0002677,2.00e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.32e-40;42!CL:0000790;9.19e-12;18!CL:0000049;1.18e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.87e-25!102;UBERON:0003061!6.87e-25!102;UBERON:0002193!6.96e-25!112;UBERON:0002371!6.39e-18!80;UBERON:0002405!5.56e-16!115;UBERON:0001474!6.35e-16!86;UBERON:0004765!5.02e-12!101;UBERON:0001434!5.02e-12!101;UBERON:0003081!2.98e-08!216;UBERON:0002384!4.11e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.60e-27,98;UBERON:0003061,6.60e-27,98;UBERON:0002371,7.99e-27,76;UBERON:0001474,2.07e-24,82;UBERON:0002193,9.35e-24,108;UBERON:0002405,9.90e-23,93;UBERON:0004765,1.09e-21,90;UBERON:0001434,6.69e-19,100;UBERON:0003081,3.17e-10,203;UBERON:0002204,6.84e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0.919421224478927,0,0,0,0,0,0,0,0.651032612147555,0,0,0.257575567634187,5.08893835728477,3.77875943688809,5.09426528494414,0.697287110717054,0.822335776043652,0.619412741790207,2.8769239232215,4.35473201099471,3.07426898855161,1.72372840368309,1.93645405075148,1.35426486594342,3.01187743268168,3.547779950752,2.47195832889593,3.97909060082173,2.56743221660875,2.55734850319616,3.29851300186716,5.18605509816243,4.68847225585964,1.16083695451434,1.13477044938228,2.4912889959823,1.00499466102697,1.0429658368404,2.6062661364614,1.21079900526674,0.736555271975129,1.58231193720442,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.180258620683,2.75107533924415,0.822405995998037,6.18590032945509,1.30368906653436,1.89379122293893,0,4.2335973616366,2.65145316727353,0.664601683750863,0.541607727530031,5.37983542847836,4.42201781703586,9.86627427622057,7.46145048021791,6.66547097190621,2.07601188426885,3.47803076516627,2.09071047609954,2.37949619664889,3.06576394881537,2.74901956386104,1.26509846009751,1.59282707162048,0.651083453856419,0,0.451725357233318,1.91979916731628,0,1.18388626022008,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,1.18218456121156,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,1.01489521846434,0,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.941881538370149,0,0,0,0,0.569261198172555,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0.919421224478927,0,0,0,0,0,0,0,0.651032612147555,0,0,0.257575567634187,5.08893835728477,3.77875943688809,5.09426528494414,0.697287110717054,0.822335776043652,0.619412741790207,2.8769239232215,4.35473201099471,3.07426898855161,1.72372840368309,1.93645405075148,1.35426486594342,3.01187743268168,3.547779950752,2.47195832889593,3.97909060082173,2.56743221660875,2.55734850319616,3.29851300186716,5.18605509816243,4.68847225585964,1.16083695451434,1.13477044938228,2.4912889959823,1.00499466102697,1.0429658368404,2.6062661364614,1.21079900526674,0.736555271975129,1.58231193720442,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.180258620683,2.75107533924415,0.822405995998037,6.18590032945509,1.30368906653436,1.89379122293893,0,4.2335973616366,2.65145316727353,0.664601683750863,0.541607727530031,5.37983542847836,4.42201781703586,9.86627427622057,7.46145048021791,6.66547097190621,2.07601188426885,3.47803076516627,2.09071047609954,2.37949619664889,3.06576394881537,2.74901956386104,1.26509846009751,1.59282707162048,0.651083453856419,0,0.451725357233318,1.91979916731628,0,1.18388626022008,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,1.18218456121156,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,1.01489521846434,0,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.941881538370149,0,0,0,0,0.569261198172555,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:5334612..5334640,+ | |short_description=p@chr10:5334612..5334640,+ | ||
}} | }} |
Latest revision as of 14:08, 23 July 2015
Short description: | p@chr10:5334612..5334640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5334612..5334640, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.60e-27 | 98 |
blood island | 6.60e-27 | 98 |
bone marrow | 7.99e-27 | 76 |
bone element | 2.07e-24 | 82 |
hemolymphoid system | 9.35e-24 | 108 |
immune system | 9.90e-23 | 93 |
skeletal element | 1.09e-21 | 90 |
skeletal system | 6.69e-19 | 100 |
lateral plate mesoderm | 3.17e-10 | 203 |
musculoskeletal system | 6.84e-09 | 167 |