FFCP PHASE1:Hg19::chr10:7514000..7514008,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_ENST00000420395_5end | |association_with_transcript=-96bp_to_ENST00000420395_5end | ||
|cluster_id=chr10:7514000..7514008,- | |||
|description=CAGE_peak_1_at_ENST00000420395_5end | |description=CAGE_peak_1_at_ENST00000420395_5end | ||
|id=chr10:7514000..7514008,- | |id=chr10:7514000..7514008,- | ||
|ontology_enrichment_celltype=CL:0002087!4.01e-09!119;CL:0000037!1.83e-08!172;CL:0000566!1.83e-08!172;CL:0002194!4.18e-08!63;CL:0000576!4.18e-08!63;CL:0000040!4.18e-08!63;CL:0000559!4.18e-08!63;CL:0000738!4.51e-08!140;CL:0002009!1.15e-07!65;CL:0000988!2.43e-07!182;CL:0002031!4.24e-07!124;CL:0002032!4.99e-07!165;CL:0000837!4.99e-07!165;CL:0000945!6.12e-07!24;CL:0000826!6.12e-07!24 | |ontology_enrichment_celltype=CL:0002087!4.01e-09!119;CL:0000037!1.83e-08!172;CL:0000566!1.83e-08!172;CL:0002194!4.18e-08!63;CL:0000576!4.18e-08!63;CL:0000040!4.18e-08!63;CL:0000559!4.18e-08!63;CL:0000738!4.51e-08!140;CL:0002009!1.15e-07!65;CL:0000988!2.43e-07!182;CL:0002031!4.24e-07!124;CL:0002032!4.99e-07!165;CL:0000837!4.99e-07!165;CL:0000945!6.12e-07!24;CL:0000826!6.12e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002619;7.90e-13;3!CL:0000784;2.83e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.17e-13,3;CL:0000784,2.78e-12,3;CL:0000037,6.97e-09,168;CL:0000988,3.89e-08,177;CL:0002032,1.10e-07,161;CL:0000837,1.10e-07,161;CL:0002087,3.21e-07,115;CL:0000738,3.90e-07,136;CL:0000945,9.65e-07,24;CL:0000826,9.65e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;3.15e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.47e-10,51;DOID:0060083,6.47e-10,51;DOID:1240,6.51e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.87e-40!115;UBERON:0001049!6.80e-18!57;UBERON:0005068!6.80e-18!57;UBERON:0006241!6.80e-18!57;UBERON:0007135!6.80e-18!57;UBERON:0001017!4.23e-15!82;UBERON:0005743!7.39e-15!86;UBERON:0000073!1.91e-13!94;UBERON:0001016!1.91e-13!94;UBERON:0002616!4.10e-13!59;UBERON:0000955!6.52e-13!69;UBERON:0006238!6.52e-13!69;UBERON:0003075!4.61e-12!86;UBERON:0007284!4.61e-12!86;UBERON:0002346!4.25e-11!90;UBERON:0002780!8.67e-11!41;UBERON:0001890!8.67e-11!41;UBERON:0006240!8.67e-11!41;UBERON:0003080!2.12e-10!42;UBERON:0001893!5.58e-10!34;UBERON:0003076!1.20e-09!15;UBERON:0003057!1.20e-09!15;UBERON:0002020!2.62e-09!34;UBERON:0003528!2.62e-09!34;UBERON:0002791!5.09e-09!33;UBERON:0000153!1.63e-08!129;UBERON:0007811!1.63e-08!129;UBERON:0002298!3.15e-08!8;UBERON:0001869!3.76e-08!32;UBERON:0002405!9.66e-08!115;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102;UBERON:0004732!1.68e-07!13;UBERON:0002193!1.71e-07!112;UBERON:0002619!2.06e-07!22;UBERON:0001950!4.35e-07!20;UBERON:0000033!6.96e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!8.87e-40!115;UBERON:0001049!6.80e-18!57;UBERON:0005068!6.80e-18!57;UBERON:0006241!6.80e-18!57;UBERON:0007135!6.80e-18!57;UBERON:0001017!4.23e-15!82;UBERON:0005743!7.39e-15!86;UBERON:0000073!1.91e-13!94;UBERON:0001016!1.91e-13!94;UBERON:0002616!4.10e-13!59;UBERON:0000955!6.52e-13!69;UBERON:0006238!6.52e-13!69;UBERON:0003075!4.61e-12!86;UBERON:0007284!4.61e-12!86;UBERON:0002346!4.25e-11!90;UBERON:0002780!8.67e-11!41;UBERON:0001890!8.67e-11!41;UBERON:0006240!8.67e-11!41;UBERON:0003080!2.12e-10!42;UBERON:0001893!5.58e-10!34;UBERON:0003076!1.20e-09!15;UBERON:0003057!1.20e-09!15;UBERON:0002020!2.62e-09!34;UBERON:0003528!2.62e-09!34;UBERON:0002791!5.09e-09!33;UBERON:0000153!1.63e-08!129;UBERON:0007811!1.63e-08!129;UBERON:0002298!3.15e-08!8;UBERON:0001869!3.76e-08!32;UBERON:0002405!9.66e-08!115;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102;UBERON:0004732!1.68e-07!13;UBERON:0002193!1.71e-07!112;UBERON:0002619!2.06e-07!22;UBERON:0001950!4.35e-07!20;UBERON:0000033!6.96e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;7.26e-09;2!UBERON:0000122;7.26e-09;2!UBERON:0001893;1.70e-08;34!UBERON:0001950;3.38e-08;20!UBERON:0002619;2.14e-07;22!UBERON:0002780;3.31e-07;41!UBERON:0001890;3.31e-07;41!UBERON:0001869;3.93e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.15e-12,56;UBERON:0005068,7.15e-12,56;UBERON:0006241,7.15e-12,56;UBERON:0007135,7.15e-12,56;UBERON:0007023,1.13e-10,114;UBERON:0000073,1.80e-09,53;UBERON:0002616,1.80e-09,53;UBERON:0001017,1.92e-09,81;UBERON:0001016,2.80e-09,89;UBERON:0001893,2.94e-09,34;UBERON:0000955,3.96e-09,68;UBERON:0006238,3.96e-09,68;UBERON:0002780,4.39e-09,41;UBERON:0001890,4.39e-09,41;UBERON:0003080,4.39e-09,41;UBERON:0006240,4.39e-09,41;UBERON:0005162,7.12e-09,2;UBERON:0000122,7.12e-09,2;UBERON:0003075,3.33e-08,82;UBERON:0007284,3.33e-08,82;UBERON:0001950,3.36e-08,20;UBERON:0001869,5.97e-08,32;UBERON:0002346,1.15e-07,86;UBERON:0002619,2.13e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.9704141467987,2.75487734597877,0,0,0.309632246632152,0,0,0,4.41563043307719,10.9470309015315,0.587200878669695,0,0,0,6.94137970143765,6.47787332037959,8.75756929956234,0.145398238779565,0,1.21292030593908,0,0,0,0.575384784644301,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.641858054152187,0,0.659702600373432,0.598390972864896,0,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,3.10037811596945,5.14795419702115,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.01805673145701,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,13.7494349593032,2.01976898167023,0,0,0,0,0,0,0,7.75997908712854,0,0,0,8.35057990539238,21.5925686694421,0.851692475380653,0,2.15068535015921,3.57881772627865,2.83643540910244,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,0.246169610922139,0,0,0,4.09257896181497,0,0,0,6.78532922266653,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,15.5696617185364,0,15.6957178635977,0.729819156862664,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,5.31810686029381,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,6.13570522246049,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,2.97699613087171,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,6.20964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60037594541211,5.5108793491461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,5.13833800771676,0,0.319267718114302,7.38418911266718,0.504143392443436,2.97376185596137,1.93770774758221,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25486783095886,0,0,3.48786956066487,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,9.03997448591862,5.26182188502793,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,0,0,0.588925401344836,1.18818560130834,2.9585900930838,0,1.03382309777839,0.902410431630081,0.699588091474503,0,0,0,0,0.917458566809082,0.716697915757256,0,7.75102988176427,3.05445483238264,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.852935927603924,0.476128862927481,1.16260037704811,0.806971285846153,0,0,0.202117188958219,0.217716747896961,0,1.48174516632093,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.9704141467987,2.75487734597877,0,0,0.309632246632152,0,0,0,4.41563043307719,10.9470309015315,0.587200878669695,0,0,0,6.94137970143765,6.47787332037959,8.75756929956234,0.145398238779565,0,1.21292030593908,0,0,0,0.575384784644301,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.641858054152187,0,0.659702600373432,0.598390972864896,0,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,3.10037811596945,5.14795419702115,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.01805673145701,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,13.7494349593032,2.01976898167023,0,0,0,0,0,0,0,7.75997908712854,0,0,0,8.35057990539238,21.5925686694421,0.851692475380653,0,2.15068535015921,3.57881772627865,2.83643540910244,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,0.246169610922139,0,0,0,4.09257896181497,0,0,0,6.78532922266653,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,15.5696617185364,0,15.6957178635977,0.729819156862664,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,5.31810686029381,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,6.13570522246049,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,2.97699613087171,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,6.20964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60037594541211,5.5108793491461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,5.13833800771676,0,0.319267718114302,7.38418911266718,0.504143392443436,2.97376185596137,1.93770774758221,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25486783095886,0,0,3.48786956066487,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,9.03997448591862,5.26182188502793,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,0,0,0.588925401344836,1.18818560130834,2.9585900930838,0,1.03382309777839,0.902410431630081,0.699588091474503,0,0,0,0,0.917458566809082,0.716697915757256,0,7.75102988176427,3.05445483238264,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.852935927603924,0.476128862927481,1.16260037704811,0.806971285846153,0,0,0.202117188958219,0.217716747896961,0,1.48174516632093,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.805095174364105,0 | ||
|short_description=p1@ENST00000420395 | |short_description=p1@ENST00000420395 | ||
}} | }} |
Latest revision as of 15:32, 23 July 2015
Short description: | p1@ENST00000420395 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000420395_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_ENST00000420395_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.17e-13 | 3 |
plasmacytoid dendritic cell | 2.78e-12 | 3 |
hematopoietic stem cell | 6.97e-09 | 168 |
hematopoietic cell | 3.89e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-07 | 161 |
nongranular leukocyte | 3.21e-07 | 115 |
leukocyte | 3.90e-07 | 136 |
lymphocyte of B lineage | 9.65e-07 | 24 |
pro-B cell | 9.65e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.15e-12 | 56 |
neural rod | 7.15e-12 | 56 |
future spinal cord | 7.15e-12 | 56 |
neural keel | 7.15e-12 | 56 |
adult organism | 1.13e-10 | 114 |
regional part of nervous system | 1.80e-09 | 53 |
regional part of brain | 1.80e-09 | 53 |
central nervous system | 1.92e-09 | 81 |
nervous system | 2.80e-09 | 89 |
telencephalon | 2.94e-09 | 34 |
brain | 3.96e-09 | 68 |
future brain | 3.96e-09 | 68 |
regional part of forebrain | 4.39e-09 | 41 |
forebrain | 4.39e-09 | 41 |
anterior neural tube | 4.39e-09 | 41 |
future forebrain | 4.39e-09 | 41 |
multi cell component structure | 7.12e-09 | 2 |
neuron projection bundle | 7.12e-09 | 2 |
neural plate | 3.33e-08 | 82 |
presumptive neural plate | 3.33e-08 | 82 |
neocortex | 3.36e-08 | 20 |
cerebral hemisphere | 5.97e-08 | 32 |
neurectoderm | 1.15e-07 | 86 |
regional part of cerebral cortex | 2.13e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.47e-10 | 51 |
immune system cancer | 6.47e-10 | 51 |
leukemia | 6.51e-08 | 39 |