FFCP PHASE1:Hg19::chr10:90988088..90988122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90988088..90988122,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:90988088..90988122,- | |description=CAGE_peak_at_chr10:90988088..90988122,- | ||
Latest revision as of 16:34, 23 July 2015
| Short description: | p@chr10:90988088..90988122, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr10:90988088..90988122, - |
| Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr10:90988088..90988122- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage | 2.25e-40 | 6 |
| immature conventional dendritic cell | 2.03e-15 | 5 |
| common dendritic progenitor | 2.03e-15 | 5 |
| monopoietic cell | 6.59e-12 | 59 |
| monocyte | 6.59e-12 | 59 |
| monoblast | 6.59e-12 | 59 |
| promonocyte | 6.59e-12 | 59 |
| macrophage dendritic cell progenitor | 1.75e-11 | 61 |
| myeloid lineage restricted progenitor cell | 1.56e-10 | 66 |
| conventional dendritic cell | 1.84e-10 | 8 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| cranial nerve II | 1.10e-10 | 1 |
| cranial nerve | 1.10e-10 | 1 |
| nerve trunk | 1.10e-10 | 1 |
| nerve connecting eye with brain | 1.10e-10 | 1 |
| nerve | 1.10e-10 | 1 |
| retinal neural layer | 1.10e-10 | 1 |
| presumptive neural retina | 1.10e-10 | 1 |
| bone marrow | 5.32e-09 | 76 |
| bone element | 2.94e-08 | 82 |
| skeletal element | 2.02e-07 | 90 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 6.28e-29 | 3 |
| leiomyoma | 6.28e-29 | 3 |
| benign neoplasm | 7.12e-22 | 4 |
Showing 1 to 3 of 3 entries
