FFCP PHASE1:Hg19::chr11:65207800..65207823,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65207800..65207823,+
|short_description=p@chr11:65207800..65207823,+
|description=CAGE_peak_at_chr11:65207800..65207823,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65207800..65207823,+ | |||
|coexpression_cluster_id=C1149 | |||
|description=CAGE_peak_at_chr11:65207800..65207823,+ | |||
|id=chr11:65207800..65207823,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.74e-07;4!UBERON:0007284;1.74e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-17!115;UBERON:0001049!3.34e-09!57;UBERON:0005068!3.34e-09!57;UBERON:0006241!3.34e-09!57;UBERON:0007135!3.34e-09!57;UBERON:0000955!9.14e-09!69;UBERON:0006238!9.14e-09!69;UBERON:0002616!1.16e-08!59;UBERON:0001017!9.13e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.14e-10;9!UBERON:0002308;2.14e-10;9!UBERON:0009663;1.98e-07;7!UBERON:0002420;2.21e-07;9!UBERON:0007245;2.21e-07;9!UBERON:0010009;2.21e-07;9!UBERON:0010011;2.21e-07;9!UBERON:0000454;2.21e-07;9!UBERON:0002298;2.92e-07;6!UBERON:0007023;4.38e-07;114!UBERON:0003528;6.67e-07;34!UBERON:0002020;6.67e-07;34!UBERON:0004732;7.54e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.80e-21,114;UBERON:0001049,1.99e-12,56;UBERON:0005068,1.99e-12,56;UBERON:0006241,1.99e-12,56;UBERON:0007135,1.99e-12,56;UBERON:0000073,7.22e-11,53;UBERON:0002616,7.22e-11,53;UBERON:0003075,2.10e-10,82;UBERON:0007284,2.10e-10,82;UBERON:0000125,3.97e-10,9;UBERON:0002308,3.97e-10,9;UBERON:0002346,1.57e-09,86;UBERON:0001017,1.62e-08,81;UBERON:0000955,1.80e-08,68;UBERON:0006238,1.80e-08,68;UBERON:0003528,1.90e-08,34;UBERON:0002020,1.90e-08,34;UBERON:0001016,2.70e-08,89;UBERON:0003076,1.68e-07,15;UBERON:0003057,1.68e-07,15;UBERON:0002420,2.37e-07,9;UBERON:0007245,2.37e-07,9;UBERON:0010009,2.37e-07,9;UBERON:0010011,2.37e-07,9;UBERON:0000454,2.37e-07,9;UBERON:0009663,3.39e-07,7;UBERON:0002298,3.85e-07,6;UBERON:0010371,3.87e-07,104;UBERON:0002780,4.50e-07,41;UBERON:0001890,4.50e-07,41;UBERON:0003080,4.50e-07,41;UBERON:0006240,4.50e-07,41;UBERON:0004732,8.91e-07,13 | |||
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|phase1_expression=0.726713517082227,0,1.40954404095971,2.00146596706261,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.853015394924529,0,1.66198622559563,5.61524452916397,4.77423915574874,0.447830948479849,0.647787332037959,0.257575567634187,0.290796477559129,1.13362783106643,0.242584061187816,0.697287110717054,0.822335776043652,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,1.37898272294647,1.29096936716765,1.35426486594342,0.376484679085209,0,0.224723484445085,0.612167784741805,0,1.27867425159808,0.329851300186716,1.19678194572979,0,0.290209238628584,0.56738522469114,0,1.7587406567972,2.60741459210101,0,4.84319602106695,0.368277635987565,0.316462387440884,0.422510572623884,0.637812899895131,0,0.336985893439485,0.450530678524519,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0.501559486172034,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.512365278902701,0.390178042679635,0,0,0.289803085735052,0,0,0,0.339928028092699,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,12.1903433156981,0,0,2.53007406669196,0,1.88300474649071,0,0,0.189069634328136,0.221729397462564,0.702678285545008,0.916853528483988,0,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0.571994910780128,0,0,0,0,0,0.838998872419812,0.275118041940067,0,1.03366703667732,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.625098097988558,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.85372853138506,2.0078563452417,0,0,0,0.74000264525148,0,0.67355336034844,0,0,0.576175924479999,0,1.5608003841516,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,2.51145489964407,0.85422955527427,0.423863802319124,0.600182192168805,0.206105058476878,2.57640540045629,0.37223371266318,1.68776332241266,0.292311015483596,2.77677151668526,0.0920498986422993,0.323292113637624,2.13005755509969,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.588664395376038,0.769494313892781,0,0,0,0,3.80265104465493,1.96565443335525,2.95394953340702,0.441463099414651,0,0.514703430895577,0.439001141634502,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.352226082707465,0,0.925971025153221,0.761016608938393,0,0,0.984868024349589,0.234004265139238,0.743155811443641,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0.414656231081544,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0,0.857479297891735,0,0,0,0.904902010304444,0,1.690605505112,0,0,0.257207374262142,0,0,0.857867961948885,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0.821905290201534,0.358121926479791,0.560425719967636,0,0.215627574859517,0.513372145118994,0,0,0,0,0,3.74503511973591,14.9580729602012,0.828831026872071,0.12269149171914,0.500170521059677,0,4.36738809214695,4.46072471992904,3.78485796081443,0.937131319941706,0,0,0,0,0,0.173767228936166,0,0,1.24060815673732,0.647142602455851,0.853820462427555,0,0,0,0.248107807818777,2.30192959932094,0,0.512556597022804,0,0.965123526861645,1.48418066444991,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0.736647911487171,0,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.633309773357254,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0,0,0.515205058238611,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0,0.966782203814463,0.580066775656914,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,2.16941611240793,0.2023155617111,0,0.94443704049192,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,2.21465597303108,1.33441135746677,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0.354761064070598,1.26664581178598,2.30506425071931,0,0,0.192444225451024,0,0,1.12972560932135,0,0,0,0.689170200620878,0,0.764637207142375,1.13929437434833,1.90585420366231,0.822724546172388,1.94541993357815,2.16012574895246,2.37937552888281,0.213648142254946,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0,0.649243880549111,0.280797178113459,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.561421621224659,1.17206543417515,0.121360521749513,0.222886768554957,0.568272293612826,0,0,0.921482106297696,1.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| ||
|short_description=p@chr11:65207800..65207823,+ | |||
}} | }} |
Latest revision as of 00:36, 24 July 2015
Short description: | p@chr11:65207800..65207823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65207800..65207823, + |
Coexpression cluster: | C1149_skeletal_spinal_heart_medulla_globus_substantia_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.80e-21 | 114 |
neural tube | 1.99e-12 | 56 |
neural rod | 1.99e-12 | 56 |
future spinal cord | 1.99e-12 | 56 |
neural keel | 1.99e-12 | 56 |
regional part of nervous system | 7.22e-11 | 53 |
regional part of brain | 7.22e-11 | 53 |
neural plate | 2.10e-10 | 82 |
presumptive neural plate | 2.10e-10 | 82 |
neural nucleus | 3.97e-10 | 9 |
nucleus of brain | 3.97e-10 | 9 |
neurectoderm | 1.57e-09 | 86 |
central nervous system | 1.62e-08 | 81 |
brain | 1.80e-08 | 68 |
future brain | 1.80e-08 | 68 |
brain grey matter | 1.90e-08 | 34 |
gray matter | 1.90e-08 | 34 |
nervous system | 2.70e-08 | 89 |
posterior neural tube | 1.68e-07 | 15 |
chordal neural plate | 1.68e-07 | 15 |
basal ganglion | 2.37e-07 | 9 |
nuclear complex of neuraxis | 2.37e-07 | 9 |
aggregate regional part of brain | 2.37e-07 | 9 |
collection of basal ganglia | 2.37e-07 | 9 |
cerebral subcortex | 2.37e-07 | 9 |
telencephalic nucleus | 3.39e-07 | 7 |
brainstem | 3.85e-07 | 6 |
ecto-epithelium | 3.87e-07 | 104 |
regional part of forebrain | 4.50e-07 | 41 |
forebrain | 4.50e-07 | 41 |
anterior neural tube | 4.50e-07 | 41 |
future forebrain | 4.50e-07 | 41 |
segmental subdivision of nervous system | 8.91e-07 | 13 |