FFCP PHASE1:Hg19::chr12:1703915..1703941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1703915..1703941,- | |||
|description=CAGE_peak_at_chr12:1703915..1703941,- | |description=CAGE_peak_at_chr12:1703915..1703941,- | ||
|id=chr12:1703915..1703941,- | |id=chr12:1703915..1703941,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002321;1.74e-08;15 | |ontology_enrichment_celltype_v019=CL:0002321;1.74e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.18e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.14e-11!94;UBERON:0001016!6.14e-11!94;UBERON:0001049!2.08e-09!57;UBERON:0005068!2.08e-09!57;UBERON:0006241!2.08e-09!57;UBERON:0007135!2.08e-09!57;UBERON:0005743!2.62e-09!86;UBERON:0001017!7.53e-09!82;UBERON:0002616!7.36e-08!59;UBERON:0000955!8.30e-08!69;UBERON:0006238!8.30e-08!69 | |ontology_enrichment_uberon=UBERON:0000073!6.14e-11!94;UBERON:0001016!6.14e-11!94;UBERON:0001049!2.08e-09!57;UBERON:0005068!2.08e-09!57;UBERON:0006241!2.08e-09!57;UBERON:0007135!2.08e-09!57;UBERON:0005743!2.62e-09!86;UBERON:0001017!7.53e-09!82;UBERON:0002616!7.36e-08!59;UBERON:0000955!8.30e-08!69;UBERON:0006238!8.30e-08!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.65e-07;34!UBERON:0002020;1.65e-07;34!UBERON:0002619;2.30e-07;22!UBERON:0001893;3.08e-07;34!UBERON:0000956;3.62e-07;25!UBERON:0000203;3.62e-07;25!UBERON:0001950;3.94e-07;20!UBERON:0002791;6.28e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.65e-07;34!UBERON:0002020;1.65e-07;34!UBERON:0002619;2.30e-07;22!UBERON:0001893;3.08e-07;34!UBERON:0000956;3.62e-07;25!UBERON:0000203;3.62e-07;25!UBERON:0001950;3.94e-07;20!UBERON:0002791;6.28e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.38e-11,56;UBERON:0005068,1.38e-11,56;UBERON:0006241,1.38e-11,56;UBERON:0007135,1.38e-11,56;UBERON:0001016,1.02e-10,89;UBERON:0000073,1.27e-10,53;UBERON:0002616,1.27e-10,53;UBERON:0003528,6.08e-10,34;UBERON:0002020,6.08e-10,34;UBERON:0001017,1.55e-09,81;UBERON:0003075,6.05e-09,82;UBERON:0007284,6.05e-09,82;UBERON:0001893,9.32e-09,34;UBERON:0002791,1.19e-08,32;UBERON:0011216,1.93e-08,223;UBERON:0002346,4.03e-08,86;UBERON:0000955,4.73e-08,68;UBERON:0006238,4.73e-08,68;UBERON:0002780,4.98e-08,41;UBERON:0001890,4.98e-08,41;UBERON:0003080,4.98e-08,41;UBERON:0006240,4.98e-08,41;UBERON:0002619,6.45e-08,22;UBERON:0000956,9.60e-08,25;UBERON:0000203,9.60e-08,25;UBERON:0001950,1.39e-07,20;UBERON:0001869,1.96e-07,32 | |||
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| ||
|short_description=p@chr12:1703915..1703941,- | |short_description=p@chr12:1703915..1703941,- | ||
}} | }} |
Latest revision as of 07:18, 24 July 2015
Short description: | p@chr12:1703915..1703941, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1703915..1703941, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.38e-11 | 56 |
neural rod | 1.38e-11 | 56 |
future spinal cord | 1.38e-11 | 56 |
neural keel | 1.38e-11 | 56 |
nervous system | 1.02e-10 | 89 |
regional part of nervous system | 1.27e-10 | 53 |
regional part of brain | 1.27e-10 | 53 |
brain grey matter | 6.08e-10 | 34 |
gray matter | 6.08e-10 | 34 |
central nervous system | 1.55e-09 | 81 |
neural plate | 6.05e-09 | 82 |
presumptive neural plate | 6.05e-09 | 82 |
telencephalon | 9.32e-09 | 34 |
regional part of telencephalon | 1.19e-08 | 32 |
organ system subdivision | 1.93e-08 | 223 |
neurectoderm | 4.03e-08 | 86 |
brain | 4.73e-08 | 68 |
future brain | 4.73e-08 | 68 |
regional part of forebrain | 4.98e-08 | 41 |
forebrain | 4.98e-08 | 41 |
anterior neural tube | 4.98e-08 | 41 |
future forebrain | 4.98e-08 | 41 |
regional part of cerebral cortex | 6.45e-08 | 22 |
cerebral cortex | 9.60e-08 | 25 |
pallium | 9.60e-08 | 25 |
neocortex | 1.39e-07 | 20 |
cerebral hemisphere | 1.96e-07 | 32 |