FFCP PHASE1:Hg19::chr12:23918317..23918318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:23918317..23918318,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr12:23918317..23918318,- | |description=CAGE_peak_at_chr12:23918317..23918318,- | ||
|id=chr12:23918317..23918318,- | |id=chr12:23918317..23918318,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.51e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.20e-13,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.26e-32!115;UBERON:0001049!2.59e-25!57;UBERON:0005068!2.59e-25!57;UBERON:0006241!2.59e-25!57;UBERON:0007135!2.59e-25!57;UBERON:0001017!1.71e-23!82;UBERON:0005743!1.68e-22!86;UBERON:0002346!2.21e-22!90;UBERON:0003075!4.65e-22!86;UBERON:0007284!4.65e-22!86;UBERON:0000073!1.51e-20!94;UBERON:0001016!1.51e-20!94;UBERON:0003080!6.16e-20!42;UBERON:0002616!1.50e-19!59;UBERON:0002780!5.10e-19!41;UBERON:0001890!5.10e-19!41;UBERON:0006240!5.10e-19!41;UBERON:0000955!9.20e-19!69;UBERON:0006238!9.20e-19!69;UBERON:0002020!4.00e-17!34;UBERON:0003528!4.00e-17!34;UBERON:0001893!1.13e-16!34;UBERON:0002791!4.50e-16!33;UBERON:0001869!1.94e-15!32;UBERON:0003056!1.83e-14!61;UBERON:0000956!3.28e-14!25;UBERON:0000203!3.28e-14!25;UBERON:0002619!3.35e-12!22;UBERON:0001950!4.42e-12!20;UBERON:0000924!2.59e-11!173;UBERON:0006601!2.59e-11!173;UBERON:0004121!6.87e-11!169;UBERON:0000153!1.03e-09!129;UBERON:0007811!1.03e-09!129;UBERON:0000033!1.16e-09!123;UBERON:0002298!5.97e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.90e-16;22!UBERON:0001950;8.27e-15;20!UBERON:0000956;4.12e-14;25!UBERON:0000203;4.12e-14;25!UBERON:0000922;2.20e-12;49!UBERON:0002021;1.69e-11;5!UBERON:0002791;1.74e-11;32!UBERON:0001869;2.07e-11;32!UBERON:0003528;1.28e-10;34!UBERON:0002020;1.28e-10;34!UBERON:0001893;7.37e-10;34!UBERON:0002780;7.82e-10;41!UBERON:0001890;7.82e-10;41!UBERON:0002107;3.58e-08;19!UBERON:0006925;3.58e-08;19!UBERON:0000073;4.29e-07;53!UBERON:0002616;4.29e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.57e-16,22;UBERON:0001950,4.98e-15,20;UBERON:0000956,2.41e-14,25;UBERON:0000203,2.41e-14,25;UBERON:0003528,5.29e-14,34;UBERON:0002020,5.29e-14,34;UBERON:0001049,1.48e-13,56;UBERON:0005068,1.48e-13,56;UBERON:0006241,1.48e-13,56;UBERON:0007135,1.48e-13,56;UBERON:0002791,8.35e-13,32;UBERON:0001869,8.35e-13,32;UBERON:0001893,6.39e-12,34;UBERON:0002021,1.05e-11,5;UBERON:0002780,2.35e-11,41;UBERON:0001890,2.35e-11,41;UBERON:0003080,2.35e-11,41;UBERON:0006240,2.35e-11,41;UBERON:0000073,4.91e-11,53;UBERON:0002616,4.91e-11,53;UBERON:0001017,3.39e-09,81;UBERON:0002346,1.12e-08,86;UBERON:0011216,1.16e-08,223;UBERON:0002107,3.12e-08,19;UBERON:0006925,3.12e-08,19;UBERON:0008836,3.12e-08,19;UBERON:0003075,4.51e-08,82;UBERON:0007284,4.51e-08,82;UBERON:0001016,6.72e-08,89;UBERON:0000955,9.59e-08,68;UBERON:0006238,9.59e-08,68;UBERON:0008835,5.71e-07,22;UBERON:0003894,5.71e-07,22;UBERON:0003056,8.77e-07,61 | |||
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| ||
|short_description=p@chr12:23918317..23918318,- | |short_description=p@chr12:23918317..23918318,- | ||
}} | }} |
Latest revision as of 07:37, 24 July 2015
Short description: | p@chr12:23918317..23918318, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:23918317..23918318, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.20e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.57e-16 | 22 |
neocortex | 4.98e-15 | 20 |
cerebral cortex | 2.41e-14 | 25 |
pallium | 2.41e-14 | 25 |
brain grey matter | 5.29e-14 | 34 |
gray matter | 5.29e-14 | 34 |
neural tube | 1.48e-13 | 56 |
neural rod | 1.48e-13 | 56 |
future spinal cord | 1.48e-13 | 56 |
neural keel | 1.48e-13 | 56 |
regional part of telencephalon | 8.35e-13 | 32 |
cerebral hemisphere | 8.35e-13 | 32 |
telencephalon | 6.39e-12 | 34 |
occipital lobe | 1.05e-11 | 5 |
regional part of forebrain | 2.35e-11 | 41 |
forebrain | 2.35e-11 | 41 |
anterior neural tube | 2.35e-11 | 41 |
future forebrain | 2.35e-11 | 41 |
regional part of nervous system | 4.91e-11 | 53 |
regional part of brain | 4.91e-11 | 53 |
central nervous system | 3.39e-09 | 81 |
neurectoderm | 1.12e-08 | 86 |
organ system subdivision | 1.16e-08 | 223 |
liver | 3.12e-08 | 19 |
digestive gland | 3.12e-08 | 19 |
liver bud | 3.12e-08 | 19 |
neural plate | 4.51e-08 | 82 |
presumptive neural plate | 4.51e-08 | 82 |
nervous system | 6.72e-08 | 89 |
brain | 9.59e-08 | 68 |
future brain | 9.59e-08 | 68 |
hepatic diverticulum | 5.71e-07 | 22 |
liver primordium | 5.71e-07 | 22 |
pre-chordal neural plate | 8.77e-07 | 61 |