FFCP PHASE1:Hg19::chr12:25539298..25539317,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:25539298..25539317,+
|short_description=p@chr12:25539298..25539317,+
|description=CAGE_peak_at_chr12:25539298..25539317,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:25539298..25539317,+ | |||
|coexpression_cluster_id=C473 | |||
|description=CAGE_peak_at_chr12:25539298..25539317,+ | |||
|id=chr12:25539298..25539317,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.76e-30!140;CL:0002057!5.69e-24!42;CL:0002087!2.45e-23!119;CL:0002031!3.40e-23!124;CL:0000037!4.65e-21!172;CL:0000566!4.65e-21!172;CL:0000860!1.46e-20!45;CL:0000988!8.59e-19!182;CL:0002032!2.04e-18!165;CL:0000837!2.04e-18!165;CL:0000766!3.04e-16!76;CL:0002320!3.54e-16!365;CL:0000134!1.78e-15!358;CL:0000034!2.32e-15!444;CL:0000048!3.09e-15!430;CL:0000723!9.47e-15!436;CL:0000557!2.33e-13!71;CL:0000219!6.74e-13!390;CL:0002009!1.19e-12!65;CL:0002194!7.88e-12!63;CL:0000576!7.88e-12!63;CL:0000040!7.88e-12!63;CL:0000559!7.88e-12!63;CL:0000839!1.25e-11!70;CL:0000838!4.71e-11!52;CL:0000542!1.82e-10!53;CL:0000051!1.82e-10!53;CL:0000791!3.73e-10!18;CL:0000789!3.73e-10!18;CL:0002420!3.73e-10!18;CL:0002419!3.73e-10!18;CL:0000790!3.73e-10!18;CL:0000003!6.14e-09!722;CL:0000763!6.19e-09!112;CL:0000049!6.19e-09!112;CL:0000084!5.23e-08!25;CL:0000827!5.23e-08!25;CL:0000236!4.50e-07!14;CL:0002393!7.49e-07!9;CL:0002397!7.49e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-28;33!CL:0002057;3.12e-28;33!CL:0000576;6.29e-22;48!CL:0000473;3.38e-18;39!CL:0000234;3.38e-18;39!CL:0000766;2.40e-17;69!CL:0002087;7.73e-14;104!CL:0000791;4.46e-13;18!CL:0000789;4.46e-13;18!CL:0002419;4.46e-13;18!CL:0000236;4.48e-11;13!CL:0000738;9.48e-11;136!CL:0000094;3.10e-10;8!CL:0000542;2.54e-09;53!CL:0002393;1.69e-08;6!CL:0002397;1.69e-08;6!CL:0000624;1.86e-08;6!CL:0000084;4.16e-08;25!CL:0000625;1.09e-07;11!CL:0000763;4.55e-07;100!CL:0000219;6.36e-07;193!CL:0000988;6.50e-07;177!CL:0000081;7.29e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.53e-54,136;CL:0002031,2.65e-43,120;CL:0002087,5.35e-43,115;CL:0000860,2.51e-40,42;CL:0002057,2.51e-40,42;CL:0000037,2.78e-40,168;CL:0000988,1.20e-36,177;CL:0000766,5.94e-36,72;CL:0002032,7.36e-36,161;CL:0000837,7.36e-36,161;CL:0000473,2.42e-33,48;CL:0000234,2.42e-33,48;CL:0000557,3.96e-30,67;CL:0002009,7.48e-28,61;CL:0000839,1.44e-26,66;CL:0002194,3.19e-26,59;CL:0000576,3.19e-26,59;CL:0000040,3.19e-26,59;CL:0000559,3.19e-26,59;CL:0000763,1.06e-20,108;CL:0000049,1.06e-20,108;CL:0002320,8.46e-20,361;CL:0000134,4.07e-19,354;CL:0000034,1.20e-16,441;CL:0000048,4.54e-16,427;CL:0000723,8.45e-16,433;CL:0000219,1.94e-15,386;CL:0000838,1.37e-14,52;CL:0000542,4.02e-14,53;CL:0000051,4.02e-14,53;CL:0000791,2.91e-13,18;CL:0000789,2.91e-13,18;CL:0002420,2.91e-13,18;CL:0002419,2.91e-13,18;CL:0000790,2.91e-13,18;CL:0002393,4.07e-11,9;CL:0002397,4.07e-11,9;CL:0000094,2.37e-10,8;CL:0000236,4.65e-10,14;CL:0000624,1.87e-08,6;CL:0000084,3.15e-08,25;CL:0000827,3.15e-08,25;CL:0000625,7.26e-08,11;CL:0000081,6.07e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-28;42!CL:0000790;4.46e-13;18!CL:0000051;2.54e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.00e-15!375;UBERON:0002390!3.90e-15!102;UBERON:0003061!3.90e-15!102;UBERON:0002193!5.11e-13!112;UBERON:0002371!1.21e-12!80;UBERON:0001474!2.29e-12!86;UBERON:0004765!4.26e-10!101;UBERON:0001434!4.26e-10!101;UBERON:0002405!9.50e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-31,98;UBERON:0003061,1.17e-31,98;UBERON:0002371,1.47e-29,76;UBERON:0002193,8.91e-27,108;UBERON:0001474,4.28e-26,82;UBERON:0004765,2.12e-25,90;UBERON:0002405,3.20e-23,93;UBERON:0001434,4.67e-21,100;UBERON:0002384,2.65e-18,371;UBERON:0003081,1.38e-15,203;UBERON:0002204,5.75e-11,167 | |||
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| ||
|short_description=p@chr12:25539298..25539317,+ | |||
}} | }} |
Latest revision as of 07:46, 24 July 2015
Short description: | p@chr12:25539298..25539317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25539298..25539317, + |
Coexpression cluster: | C473_immature_Eosinophils_cord_CD14_CD4_CD8_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-31 | 98 |
blood island | 1.17e-31 | 98 |
bone marrow | 1.47e-29 | 76 |
hemolymphoid system | 8.91e-27 | 108 |
bone element | 4.28e-26 | 82 |
skeletal element | 2.12e-25 | 90 |
immune system | 3.20e-23 | 93 |
skeletal system | 4.67e-21 | 100 |
connective tissue | 2.65e-18 | 371 |
lateral plate mesoderm | 1.38e-15 | 203 |
musculoskeletal system | 5.75e-11 | 167 |