FFCP PHASE1:Hg19::chr12:30949216..30949265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:30949216..30949265,+ | |||
|description=CAGE_peak_at_chr12:30949216..30949265,+ | |description=CAGE_peak_at_chr12:30949216..30949265,+ | ||
|id=chr12:30949216..30949265,+ | |id=chr12:30949216..30949265,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.79e-29!180;CL:0000222!1.13e-24!119;CL:0000220!1.22e-21!246;CL:0002321!2.04e-21!248;CL:0000680!2.88e-19!57;CL:0000056!2.88e-19!57;CL:0000355!2.88e-19!57;CL:0000548!4.63e-19!679;CL:0000004!4.63e-19!679;CL:0000255!4.63e-19!679;CL:0000192!1.02e-18!42;CL:0000514!1.02e-18!42;CL:0000187!1.62e-18!54;CL:0000012!1.75e-18!682;CL:0000359!1.06e-17!32;CL:0000183!1.15e-17!59;CL:0000057!3.27e-17!75;CL:0000144!1.28e-16!625;CL:0000393!3.04e-15!60;CL:0000211!3.04e-15!60;CL:0002371!2.75e-14!591;CL:0000003!8.26e-13!722;CL:0002539!1.17e-07!10;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0002620!2.54e-07!23;CL:0002494!6.68e-07!16;CL:0002334!9.34e-07!12;CL:0000076!9.53e-07!62 | |ontology_enrichment_celltype=CL:0000055!8.79e-29!180;CL:0000222!1.13e-24!119;CL:0000220!1.22e-21!246;CL:0002321!2.04e-21!248;CL:0000680!2.88e-19!57;CL:0000056!2.88e-19!57;CL:0000355!2.88e-19!57;CL:0000548!4.63e-19!679;CL:0000004!4.63e-19!679;CL:0000255!4.63e-19!679;CL:0000192!1.02e-18!42;CL:0000514!1.02e-18!42;CL:0000187!1.62e-18!54;CL:0000012!1.75e-18!682;CL:0000359!1.06e-17!32;CL:0000183!1.15e-17!59;CL:0000057!3.27e-17!75;CL:0000144!1.28e-16!625;CL:0000393!3.04e-15!60;CL:0000211!3.04e-15!60;CL:0002371!2.75e-14!591;CL:0000003!8.26e-13!722;CL:0002539!1.17e-07!10;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0002620!2.54e-07!23;CL:0002494!6.68e-07!16;CL:0002334!9.34e-07!12;CL:0000076!9.53e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.31e-21;32!CL:0000192;4.41e-13;43!CL:0002494;1.29e-12;16!CL:0002539;1.05e-10;10!CL:0000187;2.76e-09;55!CL:0002334;9.13e-08;12!CL:0000393;4.37e-07;61!CL:0000211;4.37e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.10e-23,32;CL:0000192,6.94e-18,43;CL:0000514,6.94e-18,43;CL:0000187,9.96e-17,55;CL:0000222,8.03e-16,121;CL:0000680,2.31e-15,58;CL:0000056,2.31e-15,58;CL:0000355,2.31e-15,58;CL:0000393,3.85e-14,61;CL:0000211,3.85e-14,61;CL:0002494,5.96e-13,16;CL:0002321,1.66e-11,250;CL:0002539,4.37e-11,10;CL:0000057,1.28e-09,76;CL:0002334,1.18e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.41e-13;43!CL:0000355;5.07e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.91e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.75e-24!79;UBERON:0007798!1.75e-24!79;UBERON:0001637!1.25e-23!42;UBERON:0003509!1.25e-23!42;UBERON:0004572!1.25e-23!42;UBERON:0000055!3.16e-21!69;UBERON:0001981!8.65e-21!60;UBERON:0007500!8.65e-21!60;UBERON:0004537!8.65e-21!60;UBERON:0006965!8.65e-21!60;UBERON:0004872!3.60e-20!84;UBERON:0004535!5.81e-20!110;UBERON:0000486!5.83e-20!82;UBERON:0001009!1.36e-18!113;UBERON:0004290!5.44e-18!70;UBERON:0004573!7.65e-18!33;UBERON:0004571!7.65e-18!33;UBERON:0001134!3.59e-17!61;UBERON:0002036!3.59e-17!61;UBERON:0003082!3.59e-17!61;UBERON:0003914!1.26e-16!118;UBERON:0002385!5.85e-16!63;UBERON:0001015!5.85e-16!63;UBERON:0000383!5.85e-16!63;UBERON:0000490!6.76e-16!138;UBERON:0000914!7.02e-16!83;UBERON:0002329!7.02e-16!83;UBERON:0003077!7.02e-16!83;UBERON:0003059!7.02e-16!83;UBERON:0007282!7.02e-16!83;UBERON:0009618!7.02e-16!83;UBERON:0007285!7.02e-16!83;UBERON:0000119!8.44e-13!312;UBERON:0000483!3.31e-12!309;UBERON:0000947!1.04e-11!21;UBERON:0010191!1.04e-11!21;UBERON:0005256!4.05e-10!143;UBERON:0002100!4.87e-10!216;UBERON:0000475!1.56e-08!365;UBERON:0004237!1.17e-07!10;UBERON:0004695!1.17e-07!10;UBERON:0002111!1.17e-07!10;UBERON:0004178!1.17e-07!10;UBERON:0004111!1.49e-07!241;UBERON:0000477!6.91e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.26e-19;42!UBERON:0003509;3.26e-19;42!UBERON:0004572;3.26e-19;42!UBERON:0004573;1.04e-17;33!UBERON:0004571;1.04e-17;33!UBERON:0007500;8.32e-13;56!UBERON:0001981;8.32e-13;56!UBERON:0004537;8.32e-13;56!UBERON:0004237;1.05e-10;10!UBERON:0004695;1.05e-10;10!UBERON:0002111;1.05e-10;10!UBERON:0004178;1.05e-10;10!UBERON:0000055;1.09e-10;65!UBERON:0000947;1.62e-10;21!UBERON:0010191;1.62e-10;21!UBERON:0002049;3.65e-10;75!UBERON:0007798;3.65e-10;75!UBERON:0000948;3.31e-08;22!UBERON:0001135;7.79e-08;15!UBERON:0003914;3.12e-07;74!UBERON:0007100;7.94e-07;25 | |||
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| ||
|short_description=p@chr12:30949216..30949265,+ | |short_description=p@chr12:30949216..30949265,+ | ||
}} | }} |
Latest revision as of 08:04, 24 July 2015
Short description: | p@chr12:30949216..30949265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:30949216..30949265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.10e-23 | 32 |
smooth muscle cell | 6.94e-18 | 43 |
smooth muscle myoblast | 6.94e-18 | 43 |
muscle cell | 9.96e-17 | 55 |
mesodermal cell | 8.03e-16 | 121 |
muscle precursor cell | 2.31e-15 | 58 |
myoblast | 2.31e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.31e-15 | 58 |
electrically responsive cell | 3.85e-14 | 61 |
electrically active cell | 3.85e-14 | 61 |
cardiocyte | 5.96e-13 | 16 |
embryonic cell | 1.66e-11 | 250 |
aortic smooth muscle cell | 4.37e-11 | 10 |
fibroblast | 1.28e-09 | 76 |
preadipocyte | 1.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.91e-08 | 14 |