FFCP PHASE1:Hg19::chr12:6167137..6167153,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6167137..6167153,- | |||
|coexpression_cluster_id=C3312 | |||
|description=CAGE_peak_at_chr12:6167137..6167153,- | |description=CAGE_peak_at_chr12:6167137..6167153,- | ||
|id=chr12:6167137..6167153,- | |id=chr12:6167137..6167153,- | ||
|ontology_enrichment_celltype=CL:0002139!4.96e-43!24;CL:0000115!4.98e-39!35;CL:0000071!9.36e-31!18;CL:0002546!9.36e-31!18;CL:0002078!3.11e-29!44;CL:0000213!1.30e-20!57;CL:0000215!1.30e-20!57;CL:1000413!4.47e-18!9;CL:0005020!7.31e-14!6;CL:0002138!7.31e-14!6;CL:0005022!7.31e-14!6;CL:0002544!2.29e-12!6;CL:0002543!1.68e-08!6;CL:0002144!8.29e-08!3 | |ontology_enrichment_celltype=CL:0002139!4.96e-43!24;CL:0000115!4.98e-39!35;CL:0000071!9.36e-31!18;CL:0002546!9.36e-31!18;CL:0002078!3.11e-29!44;CL:0000213!1.30e-20!57;CL:0000215!1.30e-20!57;CL:1000413!4.47e-18!9;CL:0005020!7.31e-14!6;CL:0002138!7.31e-14!6;CL:0005022!7.31e-14!6;CL:0002544!2.29e-12!6;CL:0002543!1.68e-08!6;CL:0002144!8.29e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.38e-59;24!CL:0000115;2.52e-47;36!CL:0002078;2.69e-37;45!CL:0002138;2.04e-36;6!CL:0000071;7.18e-30;18!CL:0002144;8.60e-27;3!CL:0000213;3.96e-22;58!CL:0000215;3.96e-22;58!CL:1000413;1.93e-09;9!CL:0002188;5.79e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.92e-59,36;CL:0002139,3.86e-59,24;CL:0002078,6.66e-47,45;CL:0005020,1.90e-36,6;CL:0002138,1.90e-36,6;CL:0005022,1.90e-36,6;CL:0000213,8.22e-36,58;CL:0000215,8.22e-36,58;CL:0000071,5.71e-30,18;CL:0002546,5.71e-30,18;CL:0002144,7.22e-27,3;CL:0000222,9.07e-16,121;CL:1000413,2.10e-09,9;CL:0002188,6.54e-08,5;CL:0000076,7.55e-08,63 | |||
|ontology_enrichment_development_v019=CL:0005022;2.04e-36;6!CL:0002546;7.18e-30;18!UBERON:0000358;4.24e-10;1!UBERON:0005425;8.24e-10;1!UBERON:0004874;8.24e-10;1!CL:0000222;3.37e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-39!115;UBERON:0001986!9.36e-31!18;UBERON:0004638!9.36e-31!18;UBERON:0004852!9.36e-31!18;UBERON:0000487!3.26e-24!22;UBERON:0006914!1.08e-20!25;UBERON:0003915!4.47e-18!9;UBERON:0004700!4.47e-18!9;UBERON:0001917!4.47e-18!9;UBERON:0004111!8.77e-16!241;UBERON:0000055!1.99e-15!69;UBERON:0000477!6.18e-14!286;UBERON:0002049!1.74e-12!79;UBERON:0007798!1.74e-12!79;UBERON:0000025!2.14e-11!194;UBERON:0002465!3.24e-10!10;UBERON:0001473!3.91e-10!8;UBERON:0004536!3.91e-10!8;UBERON:0006558!3.91e-10!8;UBERON:0001981!4.91e-10!60;UBERON:0007500!4.91e-10!60;UBERON:0004537!4.91e-10!60;UBERON:0006965!4.91e-10!60;UBERON:0001009!7.23e-09!113;UBERON:0004872!1.19e-08!84;UBERON:0001638!7.82e-08!9;UBERON:0003920!7.82e-08!9;UBERON:0004582!7.82e-08!9;UBERON:0001915!8.29e-08!3;UBERON:0001982!8.29e-08!3;UBERON:0004535!1.06e-07!110;UBERON:0003914!4.03e-07!118;UBERON:0006947!8.09e-07!3;UBERON:0004054!8.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.18e-30;18!UBERON:0001986;7.18e-30;18!UBERON:0004852;7.18e-30;18!UBERON:0001473;2.56e-27;8!UBERON:0004536;2.56e-27;8!UBERON:0006558;2.56e-27;8!UBERON:0010523;8.60e-27;3!UBERON:0001915;8.60e-27;3!UBERON:0001982;8.60e-27;3!UBERON:0000487;2.85e-24;22!UBERON:0002465;7.54e-22;10!UBERON:0006914;3.03e-21;25!UBERON:0000490;1.43e-15;33!UBERON:0000055;1.23e-14;65!UBERON:0002049;2.09e-10;75!UBERON:0007798;2.09e-10;75!UBERON:0000989;8.24e-10;1!UBERON:0000941;8.24e-10;1!UBERON:0002171;8.24e-10;1!UBERON:0001785;8.24e-10;1!UBERON:0002464;8.24e-10;1!UBERON:0004904;8.24e-10;1!UBERON:0008811;8.24e-10;1!UBERON:0001021;8.24e-10;1!UBERON:0006518;8.24e-10;1!UBERON:0008949;8.24e-10;1!UBERON:0000101;8.24e-10;1!UBERON:0002167;8.24e-10;1!UBERON:0003915;1.93e-09;9!UBERON:0004700;1.93e-09;9!UBERON:0001917;1.93e-09;9!UBERON:0002405;5.24e-08;27!UBERON:0007500;1.20e-07;56!UBERON:0001981;1.20e-07;56!UBERON:0004537;1.20e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.71e-30,18;UBERON:0001986,5.71e-30,18;UBERON:0004852,5.71e-30,18;UBERON:0001473,2.43e-27,8;UBERON:0004536,2.43e-27,8;UBERON:0006558,2.43e-27,8;UBERON:0010523,7.22e-27,3;UBERON:0001915,7.22e-27,3;UBERON:0001982,7.22e-27,3;UBERON:0000487,2.37e-24,22;UBERON:0000055,8.21e-23,68;UBERON:0002465,7.22e-22,10;UBERON:0006914,2.57e-21,25;UBERON:0002049,1.38e-19,78;UBERON:0007798,1.38e-19,78;UBERON:0001009,5.47e-15,112;UBERON:0004535,2.46e-13,109;UBERON:0007500,1.02e-10,59;UBERON:0001981,1.02e-10,59;UBERON:0004537,1.02e-10,59;UBERON:0006965,1.02e-10,59;UBERON:0002171,7.55e-10,1;UBERON:0006518,7.55e-10,1;UBERON:0008949,7.55e-10,1;UBERON:0000101,7.55e-10,1;UBERON:0002167,7.55e-10,1;UBERON:0000989,8.99e-10,1;UBERON:0008811,8.99e-10,1;UBERON:0006258,8.99e-10,1;UBERON:0005876,8.99e-10,1;UBERON:0004874,8.99e-10,1;UBERON:0000941,9.82e-10,1;UBERON:0001785,9.82e-10,1;UBERON:0002464,9.82e-10,1;UBERON:0004904,9.82e-10,1;UBERON:0001021,9.82e-10,1;UBERON:0003902,9.82e-10,1;UBERON:0005425,9.82e-10,1;UBERON:0003915,2.10e-09,9;UBERON:0004700,2.10e-09,9;UBERON:0001917,2.10e-09,9;UBERON:0004876,1.31e-07,11;UBERON:0004111,1.45e-07,240;UBERON:0003914,2.96e-07,117;UBERON:0004872,3.02e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,6.60283300656162,0.417989933073621,5.16833518338658,4.62496141492723,3.01248551488203,2.41697590265488,1.52054421143703,6.34561349625241,0.735326160691737,7.29127753093584,1.87529429396568,0.44905874525234,0.112611480483322,0,1.89853131913626,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,1.85194205030644,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,7.71136263451447,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,2.14613024068285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0.747511887973863,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0,0,0,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.803892390468535,0,0.20686599172379,0.213233981900981,0.714193294391221,0.129177819672012,0,0,0.190941474834495,0,0.653150243690884,0,0.134704106029175,0.358611026963382,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0.665756774185513,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,6.60283300656162,0.417989933073621,5.16833518338658,4.62496141492723,3.01248551488203,2.41697590265488,1.52054421143703,6.34561349625241,0.735326160691737,7.29127753093584,1.87529429396568,0.44905874525234,0.112611480483322,0,1.89853131913626,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,1.85194205030644,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,7.71136263451447,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,2.14613024068285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0.747511887973863,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0,0,0,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.803892390468535,0,0.20686599172379,0.213233981900981,0.714193294391221,0.129177819672012,0,0,0.190941474834495,0,0.653150243690884,0,0.134704106029175,0.358611026963382,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0.665756774185513,0.805095174364105,0 | ||
|short_description=p@chr12:6167137..6167153,- | |short_description=p@chr12:6167137..6167153,- | ||
}} | }} |
Latest revision as of 11:04, 24 July 2015
Short description: | p@chr12:6167137..6167153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6167137..6167153, - |
Coexpression cluster: | C3312_Endothelial_Renal_Hepatic_heart_umbilical_Lymphatic_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.92e-59 | 36 |
endothelial cell of vascular tree | 3.86e-59 | 24 |
meso-epithelial cell | 6.66e-47 | 45 |
lymphangioblast | 1.90e-36 | 6 |
endothelial cell of lymphatic vessel | 1.90e-36 | 6 |
vascular lymphangioblast | 1.90e-36 | 6 |
lining cell | 8.22e-36 | 58 |
barrier cell | 8.22e-36 | 58 |
blood vessel endothelial cell | 5.71e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.71e-30 | 18 |
capillary endothelial cell | 7.22e-27 | 3 |
mesodermal cell | 9.07e-16 | 121 |
endothelial cell of artery | 2.10e-09 | 9 |
glomerular endothelial cell | 6.54e-08 | 5 |
squamous epithelial cell | 7.55e-08 | 63 |