FFCP PHASE1:Hg19::chr12:69255686..69255691,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:69255686..69255691,- | |||
|description=CAGE_peak_at_chr12:69255686..69255691,- | |||
|id=chr12:69255686..69255691,- | |||
|ontology_enrichment_celltype=CL:0000839!3.79e-26!70;CL:0000557!1.26e-25!71;CL:0000766!3.16e-23!76;CL:0002194!6.66e-23!63;CL:0000576!6.66e-23!63;CL:0000040!6.66e-23!63;CL:0000559!6.66e-23!63;CL:0002009!6.64e-22!65;CL:0000860!8.68e-14!45;CL:0000763!1.97e-12!112;CL:0000049!1.97e-12!112;CL:0002031!8.03e-12!124;CL:0002057!3.30e-11!42;CL:0002087!4.43e-10!119;CL:0000738!4.66e-10!140;CL:0002619!2.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.87e-30;3!CL:0000576;2.63e-12;48!CL:0000860;8.04e-10;33!CL:0002057;8.04e-10;33!CL:0000473;1.69e-08;39!CL:0000234;1.69e-08;39!CL:0000766;6.62e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.10e-30,3;CL:0000839,5.94e-16,66;CL:0000557,1.02e-15,67;CL:0000766,1.23e-14,72;CL:0002194,3.46e-13,59;CL:0000576,3.46e-13,59;CL:0000040,3.46e-13,59;CL:0000559,3.46e-13,59;CL:0002009,9.20e-13,61;CL:0000763,9.31e-10,108;CL:0000049,9.31e-10,108;CL:0002031,9.05e-09,120;CL:0000860,9.42e-09,42;CL:0002057,9.42e-09,42;CL:0000738,1.02e-07,136;CL:0000473,1.06e-07,48;CL:0000234,1.06e-07,48;CL:0002087,8.56e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.49e-23;1!UBERON:0003056;9.31e-09;3!CL:0002057;1.83e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.58e-21!80;UBERON:0001474!1.75e-20!86;UBERON:0004765!2.11e-19!101;UBERON:0001434!2.11e-19!101;UBERON:0002390!2.58e-19!102;UBERON:0003061!2.58e-19!102;UBERON:0002193!8.83e-19!112;UBERON:0002405!1.19e-14!115;UBERON:0002308!5.63e-09!9;UBERON:0000125!5.63e-09!9;UBERON:0002204!8.14e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.49e-23;1!UBERON:0001785;1.49e-23;1!UBERON:0002464;1.49e-23;1!UBERON:0004904;1.49e-23;1!UBERON:0001021;1.49e-23;1!UBERON:0003714;1.75e-12;2!UBERON:0005162;1.75e-12;2!UBERON:0000122;1.75e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0002371,7.17e-14,76;UBERON:0001474,7.34e-13,82;UBERON:0003714,1.48e-12,2;UBERON:0005162,1.48e-12,2;UBERON:0000122,1.48e-12,2;UBERON:0004765,1.02e-11,90;UBERON:0002405,2.43e-11,93;UBERON:0002390,9.25e-11,98;UBERON:0003061,9.25e-11,98;UBERON:0001434,1.52e-10,100;UBERON:0002193,9.31e-10,108;UBERON:0001781,6.50e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,1.29557466407592,2.31818010870768,0.145398238779565,0.377875943688809,0,0,0,0,0,1.5369642391746,0.47296445977717,0.689491361473237,0,1.35426486594342,0.376484679085209,0,0,0.918251677112708,0,0,0.329851300186716,0.797854630486527,0.852449501065388,0,0.56738522469114,0.622822248995575,1.00499466102697,2.08593167368081,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0.207328115540772,2.01767934783746,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537101224341368,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.314408610199332,0.828478110694391,0.992332043623902,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0,0.178553938605658,0,0,0,0,0.716697915757256,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:69255686..69255691,- | |||
}} |
Latest revision as of 11:48, 24 July 2015
Short description: | p@chr12:69255686..69255691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69255686..69255691, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.10e-30 | 3 |
myeloid lineage restricted progenitor cell | 5.94e-16 | 66 |
granulocyte monocyte progenitor cell | 1.02e-15 | 67 |
myeloid leukocyte | 1.23e-14 | 72 |
monopoietic cell | 3.46e-13 | 59 |
monocyte | 3.46e-13 | 59 |
monoblast | 3.46e-13 | 59 |
promonocyte | 3.46e-13 | 59 |
macrophage dendritic cell progenitor | 9.20e-13 | 61 |
myeloid cell | 9.31e-10 | 108 |
common myeloid progenitor | 9.31e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 9.05e-09 | 120 |
classical monocyte | 9.42e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.42e-09 | 42 |
leukocyte | 1.02e-07 | 136 |
defensive cell | 1.06e-07 | 48 |
phagocyte | 1.06e-07 | 48 |
nongranular leukocyte | 8.56e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-23 | 1 |
cranial nerve | 1.07e-23 | 1 |
nerve trunk | 1.07e-23 | 1 |
nerve connecting eye with brain | 1.07e-23 | 1 |
nerve | 1.07e-23 | 1 |
retinal neural layer | 1.07e-23 | 1 |
presumptive neural retina | 1.07e-23 | 1 |
bone marrow | 7.17e-14 | 76 |
bone element | 7.34e-13 | 82 |
neural tissue | 1.48e-12 | 2 |
multi cell component structure | 1.48e-12 | 2 |
neuron projection bundle | 1.48e-12 | 2 |
skeletal element | 1.02e-11 | 90 |
immune system | 2.43e-11 | 93 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
skeletal system | 1.52e-10 | 100 |
hemolymphoid system | 9.31e-10 | 108 |
layer of retina | 6.50e-07 | 4 |