FFCP PHASE1:Hg19::chr12:94602407..94602423,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:94602407..94602423,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:94602407..94602423,+ | |description=CAGE_peak_at_chr12:94602407..94602423,+ | ||
|id=chr12:94602407..94602423,+ | |id=chr12:94602407..94602423,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.67e-44!42;CL:0000860!5.74e-41!45;CL:0000738!2.97e-31!140;CL:0000766!3.02e-31!76;CL:0002194!1.10e-27!63;CL:0000576!1.10e-27!63;CL:0000040!1.10e-27!63;CL:0000559!1.10e-27!63;CL:0002087!5.81e-27!119;CL:0002009!9.91e-27!65;CL:0000988!9.98e-25!182;CL:0000839!1.40e-24!70;CL:0000037!1.78e-24!172;CL:0000566!1.78e-24!172;CL:0000557!3.46e-24!71;CL:0002032!9.42e-24!165;CL:0000837!9.42e-24!165;CL:0002031!1.81e-23!124;CL:0000763!4.74e-22!112;CL:0000049!4.74e-22!112;CL:0000081!3.84e-09!11;CL:0000134!6.37e-09!358;CL:0002320!1.21e-08!365;CL:0000945!2.18e-08!24;CL:0000826!2.18e-08!24;CL:0000219!1.17e-07!390;CL:0000094!1.48e-07!8;CL:0000946!4.34e-07!1;CL:0000786!4.34e-07!1;CL:0000980!4.34e-07!1 | |ontology_enrichment_celltype=CL:0002057!3.67e-44!42;CL:0000860!5.74e-41!45;CL:0000738!2.97e-31!140;CL:0000766!3.02e-31!76;CL:0002194!1.10e-27!63;CL:0000576!1.10e-27!63;CL:0000040!1.10e-27!63;CL:0000559!1.10e-27!63;CL:0002087!5.81e-27!119;CL:0002009!9.91e-27!65;CL:0000988!9.98e-25!182;CL:0000839!1.40e-24!70;CL:0000037!1.78e-24!172;CL:0000566!1.78e-24!172;CL:0000557!3.46e-24!71;CL:0002032!9.42e-24!165;CL:0000837!9.42e-24!165;CL:0002031!1.81e-23!124;CL:0000763!4.74e-22!112;CL:0000049!4.74e-22!112;CL:0000081!3.84e-09!11;CL:0000134!6.37e-09!358;CL:0002320!1.21e-08!365;CL:0000945!2.18e-08!24;CL:0000826!2.18e-08!24;CL:0000219!1.17e-07!390;CL:0000094!1.48e-07!8;CL:0000946!4.34e-07!1;CL:0000786!4.34e-07!1;CL:0000980!4.34e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.02e-40;33!CL:0002057;7.02e-40;33!CL:0000473;3.65e-30;39!CL:0000234;3.65e-30;39!CL:0000766;2.73e-19;69!CL:0000576;1.23e-16;48!CL:0000763;5.74e-10;100!CL:0002087;3.48e-09;104!CL:0000771;5.71e-09;2!CL:0000094;1.37e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.91e-35,42;CL:0002057,1.91e-35,42;CL:0000473,6.35e-31,48;CL:0000234,6.35e-31,48;CL:0000766,4.50e-29,72;CL:0002194,1.38e-24,59;CL:0000576,1.38e-24,59;CL:0000040,1.38e-24,59;CL:0000559,1.38e-24,59;CL:0002009,9.10e-24,61;CL:0000839,6.21e-22,66;CL:0000557,1.34e-21,67;CL:0000763,3.73e-19,108;CL:0000049,3.73e-19,108;CL:0000738,5.00e-15,136;CL:0002032,1.54e-12,161;CL:0000837,1.54e-12,161;CL:0002087,2.71e-12,115;CL:0000037,5.68e-12,168;CL:0002031,9.57e-12,120;CL:0000988,2.61e-11,177;CL:0000771,5.49e-09,2;CL:0000094,1.37e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.86e-24;42!UBERON:0005425;2.25e-16;1!CL:0000049;9.15e-07;108 | |||
|ontology_enrichment_disease=DOID:4960!4.09e-07!1;DOID:0070004!4.09e-07!1 | |ontology_enrichment_disease=DOID:4960!4.09e-07!1;DOID:0070004!4.09e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.50e-24!102;UBERON:0003061!2.50e-24!102;UBERON:0002371!1.31e-23!80;UBERON:0002193!8.95e-22!112;UBERON:0001474!1.05e-21!86;UBERON:0004765!6.29e-18!101;UBERON:0001434!6.29e-18!101;UBERON:0002405!4.31e-17!115;UBERON:0002204!2.47e-09!167;UBERON:0003081!3.59e-09!216;UBERON:0002384!2.91e-08!375;UBERON:0000941!1.33e-07!1;UBERON:0004904!1.33e-07!1;UBERON:0002464!1.33e-07!1;UBERON:0001021!1.33e-07!1;UBERON:0001785!1.33e-07!1 | |ontology_enrichment_uberon=UBERON:0002390!2.50e-24!102;UBERON:0003061!2.50e-24!102;UBERON:0002371!1.31e-23!80;UBERON:0002193!8.95e-22!112;UBERON:0001474!1.05e-21!86;UBERON:0004765!6.29e-18!101;UBERON:0001434!6.29e-18!101;UBERON:0002405!4.31e-17!115;UBERON:0002204!2.47e-09!167;UBERON:0003081!3.59e-09!216;UBERON:0002384!2.91e-08!375;UBERON:0000941!1.33e-07!1;UBERON:0004904!1.33e-07!1;UBERON:0002464!1.33e-07!1;UBERON:0001021!1.33e-07!1;UBERON:0001785!1.33e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.25e-16;1!UBERON:0001785;2.25e-16;1!UBERON:0002464;2.25e-16;1!UBERON:0004904;2.25e-16;1!UBERON:0001021;2.25e-16;1!UBERON:0003714;7.49e-09;2!UBERON:0005162;7.49e-09;2!UBERON:0000122;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.62e-19,76;UBERON:0001474,1.53e-17,82;UBERON:0000941,2.63e-16,1;UBERON:0001785,2.63e-16,1;UBERON:0002464,2.63e-16,1;UBERON:0004904,2.63e-16,1;UBERON:0001021,2.63e-16,1;UBERON:0003902,2.63e-16,1;UBERON:0005425,2.63e-16,1;UBERON:0004765,6.35e-16,90;UBERON:0002405,2.19e-15,93;UBERON:0002390,1.45e-14,98;UBERON:0003061,1.45e-14,98;UBERON:0001434,2.94e-14,100;UBERON:0002193,3.83e-13,108;UBERON:0003714,8.09e-09,2;UBERON:0005162,8.09e-09,2;UBERON:0000122,8.09e-09,2;UBERON:0002204,3.54e-08,167 | |||
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|short_description=p@chr12:94602407..94602423,+ | |short_description=p@chr12:94602407..94602423,+ | ||
}} | }} |
Latest revision as of 13:45, 24 July 2015
Short description: | p@chr12:94602407..94602423, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:94602407..94602423, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.91e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-35 | 42 |
defensive cell | 6.35e-31 | 48 |
phagocyte | 6.35e-31 | 48 |
myeloid leukocyte | 4.50e-29 | 72 |
monopoietic cell | 1.38e-24 | 59 |
monocyte | 1.38e-24 | 59 |
monoblast | 1.38e-24 | 59 |
promonocyte | 1.38e-24 | 59 |
macrophage dendritic cell progenitor | 9.10e-24 | 61 |
myeloid lineage restricted progenitor cell | 6.21e-22 | 66 |
granulocyte monocyte progenitor cell | 1.34e-21 | 67 |
myeloid cell | 3.73e-19 | 108 |
common myeloid progenitor | 3.73e-19 | 108 |
leukocyte | 5.00e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.54e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-12 | 161 |
nongranular leukocyte | 2.71e-12 | 115 |
hematopoietic stem cell | 5.68e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 9.57e-12 | 120 |
hematopoietic cell | 2.61e-11 | 177 |
eosinophil | 5.49e-09 | 2 |
granulocyte | 1.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.62e-19 | 76 |
bone element | 1.53e-17 | 82 |
cranial nerve II | 2.63e-16 | 1 |
cranial nerve | 2.63e-16 | 1 |
nerve trunk | 2.63e-16 | 1 |
nerve connecting eye with brain | 2.63e-16 | 1 |
nerve | 2.63e-16 | 1 |
retinal neural layer | 2.63e-16 | 1 |
presumptive neural retina | 2.63e-16 | 1 |
skeletal element | 6.35e-16 | 90 |
immune system | 2.19e-15 | 93 |
hematopoietic system | 1.45e-14 | 98 |
blood island | 1.45e-14 | 98 |
skeletal system | 2.94e-14 | 100 |
hemolymphoid system | 3.83e-13 | 108 |
neural tissue | 8.09e-09 | 2 |
multi cell component structure | 8.09e-09 | 2 |
neuron projection bundle | 8.09e-09 | 2 |
musculoskeletal system | 3.54e-08 | 167 |