FFCP PHASE1:Hg19::chr13:31736570..31736603,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:31736570..31736603,+ | |||
|description=CAGE_peak_at_chr13:31736570..31736603,+ | |||
|id=chr13:31736570..31736603,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.19e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-08,5;CL:0002028,2.23e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.88e-14!57;UBERON:0005068!6.88e-14!57;UBERON:0006241!6.88e-14!57;UBERON:0007135!6.88e-14!57;UBERON:0007023!1.69e-13!115;UBERON:0001017!2.03e-12!82;UBERON:0002616!5.39e-12!59;UBERON:0005743!1.94e-11!86;UBERON:0003080!2.40e-11!42;UBERON:0002780!8.96e-11!41;UBERON:0001890!8.96e-11!41;UBERON:0006240!8.96e-11!41;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0000073!3.04e-10!94;UBERON:0001016!3.04e-10!94;UBERON:0001893!1.76e-08!34;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0003075!4.05e-08!86;UBERON:0007284!4.05e-08!86;UBERON:0002791!4.07e-08!33;UBERON:0002346!1.13e-07!90;UBERON:0001869!1.94e-07!32;UBERON:0003056!8.52e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.25e-10;53!UBERON:0002616;9.25e-10;53!UBERON:0003296;2.99e-09;4!UBERON:0010133;2.99e-09;4!UBERON:0002780;7.25e-09;41!UBERON:0001890;7.25e-09;41!UBERON:0001894;6.37e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.31e-15,56;UBERON:0005068,2.31e-15,56;UBERON:0006241,2.31e-15,56;UBERON:0007135,2.31e-15,56;UBERON:0000073,1.79e-13,53;UBERON:0002616,1.79e-13,53;UBERON:0001017,1.04e-12,81;UBERON:0000955,2.58e-11,68;UBERON:0006238,2.58e-11,68;UBERON:0001016,9.96e-11,89;UBERON:0002780,1.31e-10,41;UBERON:0001890,1.31e-10,41;UBERON:0003080,1.31e-10,41;UBERON:0006240,1.31e-10,41;UBERON:0007023,2.19e-10,114;UBERON:0003075,1.84e-09,82;UBERON:0007284,1.84e-09,82;UBERON:0003296,3.30e-09,4;UBERON:0010133,3.30e-09,4;UBERON:0002346,9.85e-09,86;UBERON:0001894,7.00e-08,7;UBERON:0006222,7.00e-08,7 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,1.10808952269109,0.612002073732759,0,0,0.410623275218653,0,0.687720651731561,0.656804715599566,0.944529375764151,0.393364276848904,1.15148819429164,0.77408061658038,0,0.30120591877825,0.369754010166788,0.232401601740905,0,1.17440175733939,0,0,0.217010870715852,0.447830948479849,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,1.54853185447552,0.28769239232215,0,1.18241114944293,0.344745680736619,0,4.06279459783025,0.188242339542605,0,1.12361742222542,0,0.320929027076094,3.19668562899521,0,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,1.00499466102697,1.0429658368404,1.52032191293582,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0,0,0,0,0,0.182664153764634,0,0,0,2.98711155796555,0,1.14950487990897,0.661044872784862,1.90810750907073,1.1384259382189,1.17447437874188,0.764546456250458,1.32171328579026,0,1.31692042387539,0.196709770113833,0.786021525498329,0.822405995998037,0.501559486172034,0.651844533267181,0.946895611469467,1.94826728407911,0.222820913770347,0.294605907474837,1.32920336750173,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0,0.296573126324121,1.33770414044857,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0,0.950452044448374,0.752875595388864,0.255973222308837,1.24930726552346,0.473554504088034,0,1.41124720257313,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0.795285947051099,0,0.850813354476611,0.443458794925128,0.351339142772504,1.76821751921912,0,0,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0.367663080345869,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.326923806226917,0.454072282934794,0,0.468642863667593,0,1.1409436430889,0,0.469737994575059,0,0.280901613404497,0.408308342509787,0.368502951935304,0,1.18800285728205,0,0,0,1.17835279767846,0.375355559615893,0.277064115484183,0,0,0.600952235626387,0,0.538168907066586,0.427114777637135,0,0,0,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.508681776931463,0,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.723033089650446,0,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,1.32438929824395,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,6.89728533054321,0.44024217006613,8.50045273717165,4.32359860250884,12.1192736089325,0.380987365753014,0.381988425558278,1.17217447210047,0,0.308482478109971,0.300343057843917,0.571652865261156,0.448524337381443,0.43596006883328,0.07333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0.799266537048298,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,2.29723871668228,0,0,0,0.179060963239896,0.224170287987055,0.985153801009636,0.862510299438069,0.641715181398742,0,1.30139853857622,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0.391602314925481,1.02943027143257,0,0.215714200818617,0,1.81876542867756,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0.116210378459959,0.966875596732978,0.40101294060657,0.276242966807689,0.34444334449382,0.182091168006717,0,0.451199612907412,0,0.784349769176855,0,0,0,0.510281115829547,0,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0.447749509444357,1.31555925987561,0.784306353074702,0,0,0,2.47298427954533,0.54941678891006,0.577566499444116,0,0,0,0.580024309752732,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0.893288987462089,0.10115778085555,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0.511795582622668,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0.975267478179181,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,2.54188262097304,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0.185803175125719,0.28853842595289,0.426851060090485,0.159426272728822,0.399158742865633,0.191505370132367,0,0,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0.23874448473769,0.296964680832639,0,0,1.68803299692615,0,0,0.211125408127993,1.39473591775749,0.276283915531148,0.755798243562828,0,0.615424027305347,0,0,0,0.511572370226872,0.197286811273867,0,0,1.93866549219044,0.278304294485554,1.99613798001194,0,0.262379999988587,2.17499872630438,0,0,0,1.03423011972439,0,0.347249989866585,0,1.80894657938112,0,1.65868889896837,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0,0,0.325942115766024,0,0.366390373607449,0,0,0.156980256395025,0.332423363800313,0.225595660617181,0.784250137270958,0.167821586975843,0,0.317873157960757,0,0,0,0.649165919226273,0,0.619202951523374,0.611030144933625,2.37216902944498,0.494255755786011,0.313265848516366,1.34802265961354,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0.91821828489147,0.252746318513952,1.80388103297391,0.829505531177977,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0.164230914106418,0.678923115418936,0.0882561266915003,0,0,0.19871461170299,0.696418755514666,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.114536596165916,0.514784993585894,0.14405479798815,0.124252535565433,0,0,0.209205692624666,0.203996435272644,0,0.600420288709789,1.50595916781192,0,0,0.262887354279314,0.558564802544508,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.604651252380536,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.0984274815147488,0.0846733320657845,0,2.58786471611994,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.91124334987037,0,0.0788057072991982,0.629455057619977,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,1.32506888912221,0.646414781807753,1.85125642439766,0,0,0.961086713109252,0.471612915298998,0.414239055347196,0.992332043623902,0,0.121792598380896,0,1.63205341010842,1.0027595760908,0.919036730290385,1.63936315354902,0,0.886068179966986,0.610131324509816,0.876336514945499,1.72022758707021,2.88415533995816,0.807253238237985,0,0,0.151649117541648,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.675769762612291,0,0.345430341731199,0.607719912354764,0.967809053062115,2.14346339723327,0.398594520940089,0.163565394255844,0,0,0,0,0.213383459388282,0.344429959321631,0,0,0,0,0.76736622782191,0,0.157265941855896,0.218419276384028,0.169732529954025,0,0.123935764259002,0.558644917973244,0,1.73495839002757,0.80057074828547,0.352675943690684,0,0.578063025868136,1.41696576325585,1.75597244962866,0.615349092722265,1.00828678488687,0.622415272177961,0.322951291263702,0,0,0.11796972334774,0,0.115525666150338,0,0,0.397832444232549,0.225630985047772,0,0,0,0,0,0.810451015420736,0,1.2401207790071,0.697573912132975,2.18789923607288,0,0,0.175871244359621,0.127762427639595,3.21421101526972,3.69912094440706,1.21393120847326,1.36597314810779,0.0887023701626388,0,0.171488009437418,0.679697329768317,0.460409414939944,0,0.111231401892069,0.863424021355654,2.04250266890802,0,0.913158720509496,0,0,0.857718530119876,0.47404083519818,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0.237840181555137,0.11294608203896,0.439762066981716,0.150962843566674,0,0,1.41095188908457,0,0,1.37415926980462,2.67341760294377,0,0,0.0939839179798536,1.35361564744512,0,0,0,0,0,0.458729283404541,3.29681041248338,0,0.815897882290976,2.18175345170189,0.5290268405154,0,0,0.432626562123789,0,0.109265571963696,0.253397002022874,0,0,0.459474497674225,0.250707539292375,0.833565680400634,1.60778478093707,0,2.27552590896169,0.213233981900981,0.23806443146374,1.48554492622814,5.27635071514792,0.112131862580613,1.01835453245064,0.404234377916439,0,0,0.5388164241167,0.286888821570705,1.33064142618405,0.244209805832924,0,0,0.0898252021065869,0,0.733448665097199,0.406896178315738,3.99454064511308,1.00636896795513,0 | |||
|short_description=p@chr13:31736570..31736603,+ | |||
}} |
Latest revision as of 15:36, 24 July 2015
Short description: | p@chr13:31736570..31736603, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31736570..31736603, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.23e-08 | 5 |
basophil mast progenitor cell | 2.23e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.31e-15 | 56 |
neural rod | 2.31e-15 | 56 |
future spinal cord | 2.31e-15 | 56 |
neural keel | 2.31e-15 | 56 |
regional part of nervous system | 1.79e-13 | 53 |
regional part of brain | 1.79e-13 | 53 |
central nervous system | 1.04e-12 | 81 |
brain | 2.58e-11 | 68 |
future brain | 2.58e-11 | 68 |
nervous system | 9.96e-11 | 89 |
regional part of forebrain | 1.31e-10 | 41 |
forebrain | 1.31e-10 | 41 |
anterior neural tube | 1.31e-10 | 41 |
future forebrain | 1.31e-10 | 41 |
adult organism | 2.19e-10 | 114 |
neural plate | 1.84e-09 | 82 |
presumptive neural plate | 1.84e-09 | 82 |
gland of diencephalon | 3.30e-09 | 4 |
neuroendocrine gland | 3.30e-09 | 4 |
neurectoderm | 9.85e-09 | 86 |
diencephalon | 7.00e-08 | 7 |
future diencephalon | 7.00e-08 | 7 |