FFCP PHASE1:Hg19::chr13:43393954..43393961,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:43393954..43393961,- to FFCP PHASE1:Hg19::chr13:43393954..43393961,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:43393954..43393961,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:43393954..43393961,- | |||
|id=chr13:43393954..43393961,- | |||
|ontology_enrichment_celltype=CL:0002057!4.49e-30!42;CL:0000860!2.60e-27!45;CL:0002194!7.81e-26!63;CL:0000576!7.81e-26!63;CL:0000040!7.81e-26!63;CL:0000559!7.81e-26!63;CL:0002009!1.19e-24!65;CL:0000839!3.51e-23!70;CL:0000557!1.13e-22!71;CL:0000766!1.38e-21!76;CL:0000048!1.83e-17!430;CL:0000723!8.64e-17!436;CL:0000034!1.53e-16!444;CL:0000134!3.19e-13!358;CL:0000219!6.17e-13!390;CL:0002320!1.75e-12!365;CL:0000763!1.86e-11!112;CL:0000049!1.86e-11!112;CL:0002087!2.65e-11!119;CL:0002031!5.55e-11!124;CL:0002570!3.81e-09!8;CL:0000738!5.62e-09!140;CL:0000144!1.68e-07!625;CL:0000188!1.69e-07!9;CL:0002371!7.80e-07!591;CL:0000569!9.68e-07!4;CL:0000011!9.68e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-58;33!CL:0002057;1.21e-58;33!CL:0000473;4.91e-49;39!CL:0000234;4.91e-49;39!CL:0000576;2.91e-25;48!CL:0000766;1.34e-16;69!CL:0002570;1.03e-12;8!CL:0000569;8.20e-12;4!CL:0000188;8.86e-11;9!CL:0000723;3.38e-09;61!CL:0000594;3.97e-09;3!CL:0000763;4.42e-08;100!CL:0000048;4.72e-08;58!CL:0000134;6.08e-08;55!CL:0002087;8.94e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.57e-51,48;CL:0000234,1.57e-51,48;CL:0000860,2.53e-48,42;CL:0002057,2.53e-48,42;CL:0002194,1.66e-39,59;CL:0000576,1.66e-39,59;CL:0000040,1.66e-39,59;CL:0000559,1.66e-39,59;CL:0002009,5.90e-38,61;CL:0000839,1.73e-34,66;CL:0000557,7.43e-34,67;CL:0000766,5.88e-31,72;CL:0000763,5.26e-18,108;CL:0000049,5.26e-18,108;CL:0002087,1.95e-16,115;CL:0002031,1.99e-15,120;CL:0000048,4.11e-15,427;CL:0000723,1.05e-14,433;CL:0000034,3.52e-14,441;CL:0000134,6.78e-14,354;CL:0002320,2.26e-13,361;CL:0000219,4.99e-13,386;CL:0002570,9.00e-13,8;CL:0000738,1.03e-12,136;CL:0000569,9.62e-12,4;CL:0000011,9.62e-12,4;CL:0000188,1.24e-10,9;CL:0002032,1.37e-09,161;CL:0000837,1.37e-09,161;CL:0000594,4.85e-09,3;CL:0000037,6.86e-09,168;CL:0000988,4.45e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-37;42!CL:0000011;8.20e-12;4 | |||
|ontology_enrichment_disease=DOID:2394!6.74e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.29e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.05e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.68e-23!80;UBERON:0001474!2.19e-21!86;UBERON:0002204!1.09e-18!167;UBERON:0004765!4.25e-18!101;UBERON:0001434!4.25e-18!101;UBERON:0002390!4.26e-15!102;UBERON:0003061!4.26e-15!102;UBERON:0002405!4.45e-15!115;UBERON:0002193!2.47e-13!112;UBERON:0002384!1.57e-12!375;UBERON:0003081!1.72e-07!216;UBERON:0001013!1.73e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.13e-09;14!UBERON:0000992;2.15e-07;13!UBERON:0002119;3.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.23e-36,76;UBERON:0001474,1.15e-32,82;UBERON:0004765,5.46e-29,90;UBERON:0002405,8.99e-28,93;UBERON:0002390,6.54e-26,98;UBERON:0003061,6.54e-26,98;UBERON:0001434,3.22e-25,100;UBERON:0002193,1.05e-22,108;UBERON:0002204,2.69e-20,167;UBERON:0000926,3.15e-15,315;UBERON:0004120,3.15e-15,315;UBERON:0006603,3.15e-15,315;UBERON:0003081,5.34e-14,203;UBERON:0002384,2.04e-13,371;UBERON:0001013,2.74e-09,14;UBERON:0000992,2.01e-07,13;UBERON:0002119,3.46e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,1.59938062657521,7.55751887377619,0.970336244751265,15.3403164357752,40.2944530261389,18.8920886246013,23.8784685627385,34.3255346748995,18.4456139313096,76.1887954427927,85.203978233065,29.7938270507552,6.02375486536335,20.7408674043963,6.51698104890745,44.07608050141,102.055430610198,44.1142616801338,0,3.78980949481101,0,8.70627715885752,43.6886623012178,13.0792672289071,32.9135751486334,39.6327017999353,24.3251506069731,6.65939452896706,61.5023652099233,15.8231193720442,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0,0,0,0,3.1811437882044,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,3.7345324247972,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,7.72214074959484,11.5932306585208,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,1.95441710576241,0.710783897485092,0,1.80863626235752,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,3.19611105563629,4.76337504880093,0,2.67283870457906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.48335359146061,3.08097234229289,3.07007349452259,1.10269257987624,16.3278772199776,1.0151168573996,1.53407929348982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.596143835108969,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,11.8469741859623,0,0,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6120667406511,10.5170989431251,23.8566520446124,25.0011966963118,18.8675926314431,3.55924488638614,1.14420034198462,11.4935502060062,13.6784736512847,1.47855149989634,0.63718706865481,19.341533823035,2.48420731002015,2.07353103920428,0.265841714557995,0,7.66313805885814,0.761610424337591,0.406870733204662,5.8191570944819,2.36303225493475,1.85613503951397,0,0,1.71697852591396,2.02049693259551,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,1.10777426186905,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,1.59938062657521,7.55751887377619,0.970336244751265,15.3403164357752,40.2944530261389,18.8920886246013,23.8784685627385,34.3255346748995,18.4456139313096,76.1887954427927,85.203978233065,29.7938270507552,6.02375486536335,20.7408674043963,6.51698104890745,44.07608050141,102.055430610198,44.1142616801338,0,3.78980949481101,0,8.70627715885752,43.6886623012178,13.0792672289071,32.9135751486334,39.6327017999353,24.3251506069731,6.65939452896706,61.5023652099233,15.8231193720442,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0,0,0,0,3.1811437882044,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,3.7345324247972,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,7.72214074959484,11.5932306585208,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,1.95441710576241,0.710783897485092,0,1.80863626235752,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,3.19611105563629,4.76337504880093,0,2.67283870457906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.48335359146061,3.08097234229289,3.07007349452259,1.10269257987624,16.3278772199776,1.0151168573996,1.53407929348982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.596143835108969,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,11.8469741859623,0,0,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6120667406511,10.5170989431251,23.8566520446124,25.0011966963118,18.8675926314431,3.55924488638614,1.14420034198462,11.4935502060062,13.6784736512847,1.47855149989634,0.63718706865481,19.341533823035,2.48420731002015,2.07353103920428,0.265841714557995,0,7.66313805885814,0.761610424337591,0.406870733204662,5.8191570944819,2.36303225493475,1.85613503951397,0,0,1.71697852591396,2.02049693259551,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,1.10777426186905,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:43393954..43393961,- | |||
}} | }} |
Latest revision as of 16:06, 24 July 2015
Short description: | p@chr13:43393954..43393961, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43393954..43393961, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.23e-36 | 76 |
bone element | 1.15e-32 | 82 |
skeletal element | 5.46e-29 | 90 |
immune system | 8.99e-28 | 93 |
hematopoietic system | 6.54e-26 | 98 |
blood island | 6.54e-26 | 98 |
skeletal system | 3.22e-25 | 100 |
hemolymphoid system | 1.05e-22 | 108 |
musculoskeletal system | 2.69e-20 | 167 |
mesoderm | 3.15e-15 | 315 |
mesoderm-derived structure | 3.15e-15 | 315 |
presumptive mesoderm | 3.15e-15 | 315 |
lateral plate mesoderm | 5.34e-14 | 203 |
connective tissue | 2.04e-13 | 371 |
adipose tissue | 2.74e-09 | 14 |
female gonad | 2.01e-07 | 13 |
left ovary | 3.46e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.05e-09 | 14 |