FFCP PHASE1:Hg19::chr15:78365168..78365181,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:78365168..78365181,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr15:78365168..78365181,+ | |description=CAGE_peak_at_chr15:78365168..78365181,+ | ||
|id=chr15:78365168..78365181,+ | |id=chr15:78365168..78365181,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.47e-10!42;CL:0002031!4.42e-09!124;CL:0000860!6.18e-09!45;CL:0000738!1.32e-08!140;CL:0000839!1.61e-08!70;CL:0000766!1.99e-08!76;CL:0000557!2.48e-08!71;CL:0002087!4.69e-08!119;CL:0000623!5.21e-08!3;CL:0000825!5.21e-08!3;CL:0002032!2.24e-07!165;CL:0000837!2.24e-07!165;CL:0000037!2.55e-07!172;CL:0000566!2.55e-07!172;CL:0002194!7.23e-07!63;CL:0000576!7.23e-07!63;CL:0000040!7.23e-07!63;CL:0000559!7.23e-07!63 | |ontology_enrichment_celltype=CL:0002057!7.47e-10!42;CL:0002031!4.42e-09!124;CL:0000860!6.18e-09!45;CL:0000738!1.32e-08!140;CL:0000839!1.61e-08!70;CL:0000766!1.99e-08!76;CL:0000557!2.48e-08!71;CL:0002087!4.69e-08!119;CL:0000623!5.21e-08!3;CL:0000825!5.21e-08!3;CL:0002032!2.24e-07!165;CL:0000837!2.24e-07!165;CL:0000037!2.55e-07!172;CL:0000566!2.55e-07!172;CL:0002194!7.23e-07!63;CL:0000576!7.23e-07!63;CL:0000040!7.23e-07!63;CL:0000559!7.23e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-36;33!CL:0002057;3.93e-36;33!CL:0000473;2.97e-26;39!CL:0000234;2.97e-26;39!CL:0000576;1.42e-20;48!CL:0000766;7.35e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-31,42;CL:0002057,2.43e-31,42;CL:0000473,2.33e-27,48;CL:0000234,2.33e-27,48;CL:0002194,8.93e-22,59;CL:0000576,8.93e-22,59;CL:0000040,8.93e-22,59;CL:0000559,8.93e-22,59;CL:0002009,4.70e-21,61;CL:0000839,1.94e-19,66;CL:0000557,3.83e-19,67;CL:0000766,8.65e-18,72;CL:0002087,1.55e-13,115;CL:0002031,6.08e-13,120;CL:0000763,1.09e-11,108;CL:0000049,1.09e-11,108;CL:0000738,2.47e-11,136;CL:0002032,1.89e-09,161;CL:0000837,1.89e-09,161;CL:0000037,5.07e-09,168;CL:0000988,1.61e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-24;42!UBERON:0005425;1.44e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.40e-07!80;UBERON:0001474!8.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.44e-17;1!UBERON:0001785;1.44e-17;1!UBERON:0002464;1.44e-17;1!UBERON:0004904;1.44e-17;1!UBERON:0001021;1.44e-17;1!UBERON:0003714;1.86e-09;2!UBERON:0005162;1.86e-09;2!UBERON:0000122;1.86e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.22e-17,1;UBERON:0001785,1.22e-17,1;UBERON:0002464,1.22e-17,1;UBERON:0004904,1.22e-17,1;UBERON:0001021,1.22e-17,1;UBERON:0003902,1.22e-17,1;UBERON:0005425,1.22e-17,1;UBERON:0002371,7.84e-17,76;UBERON:0001474,1.44e-15,82;UBERON:0004765,3.85e-14,90;UBERON:0002405,1.15e-13,93;UBERON:0002390,6.09e-13,98;UBERON:0003061,6.09e-13,98;UBERON:0001434,1.13e-12,100;UBERON:0002193,1.09e-11,108;UBERON:0003714,1.71e-09,2;UBERON:0005162,1.71e-09,2;UBERON:0000122,1.71e-09,2;UBERON:0002204,2.63e-07,167 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,7.76769459269806,8.96562472851852,8.74984250587765,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,2.96866170168044,3.19141852194611,2.13112375266347,0,0,0,4.27122730936464,5.21482918420201,5.64690996233303,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.640672166455702,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:78365168..78365181,+ | |short_description=p@chr15:78365168..78365181,+ | ||
}} | }} |
Latest revision as of 04:32, 25 July 2015
Short description: | p@chr15:78365168..78365181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:78365168..78365181, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-31 | 42 |
defensive cell | 2.33e-27 | 48 |
phagocyte | 2.33e-27 | 48 |
monopoietic cell | 8.93e-22 | 59 |
monocyte | 8.93e-22 | 59 |
monoblast | 8.93e-22 | 59 |
promonocyte | 8.93e-22 | 59 |
macrophage dendritic cell progenitor | 4.70e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.94e-19 | 66 |
granulocyte monocyte progenitor cell | 3.83e-19 | 67 |
myeloid leukocyte | 8.65e-18 | 72 |
nongranular leukocyte | 1.55e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.08e-13 | 120 |
myeloid cell | 1.09e-11 | 108 |
common myeloid progenitor | 1.09e-11 | 108 |
leukocyte | 2.47e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.89e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-09 | 161 |
hematopoietic stem cell | 5.07e-09 | 168 |
hematopoietic cell | 1.61e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.22e-17 | 1 |
cranial nerve | 1.22e-17 | 1 |
nerve trunk | 1.22e-17 | 1 |
nerve connecting eye with brain | 1.22e-17 | 1 |
nerve | 1.22e-17 | 1 |
retinal neural layer | 1.22e-17 | 1 |
presumptive neural retina | 1.22e-17 | 1 |
bone marrow | 7.84e-17 | 76 |
bone element | 1.44e-15 | 82 |
skeletal element | 3.85e-14 | 90 |
immune system | 1.15e-13 | 93 |
hematopoietic system | 6.09e-13 | 98 |
blood island | 6.09e-13 | 98 |
skeletal system | 1.13e-12 | 100 |
hemolymphoid system | 1.09e-11 | 108 |
neural tissue | 1.71e-09 | 2 |
multi cell component structure | 1.71e-09 | 2 |
neuron projection bundle | 1.71e-09 | 2 |
musculoskeletal system | 2.63e-07 | 167 |