FFCP PHASE1:Hg19::chr16:11998033..11998052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:11998033..11998052,- | |||
|coexpression_cluster_id=C3534 | |coexpression_cluster_id=C3534 | ||
|description=CAGE_peak_at_chr16:11998033..11998052,- | |description=CAGE_peak_at_chr16:11998033..11998052,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.57e-14!235;DOID:14566!5.87e-14!239;DOID:0050686!8.55e-12!137;DOID:305!2.92e-09!106;DOID:2531!1.29e-08!51;DOID:0060083!1.29e-08!51;DOID:0050687!1.26e-07!143 | |ontology_enrichment_disease=DOID:162!1.57e-14!235;DOID:14566!5.87e-14!239;DOID:0050686!8.55e-12!137;DOID:305!2.92e-09!106;DOID:2531!1.29e-08!51;DOID:0060083!1.29e-08!51;DOID:0050687!1.26e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.56e-14,235;DOID:14566,5.86e-14,239;DOID:0050686,8.53e-12,137;DOID:305,2.91e-09,106;DOID:2531,1.29e-08,51;DOID:0060083,1.29e-08,51;DOID:0050687,1.26e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.38e-13!82;UBERON:0005743!6.56e-12!86;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0001049!3.96e-10!57;UBERON:0005068!3.96e-10!57;UBERON:0006241!3.96e-10!57;UBERON:0007135!3.96e-10!57;UBERON:0000073!4.04e-10!94;UBERON:0001016!4.04e-10!94;UBERON:0002020!7.53e-10!34;UBERON:0003528!7.53e-10!34;UBERON:0002616!2.53e-09!59;UBERON:0001869!5.34e-09!32;UBERON:0002780!8.37e-09!41;UBERON:0001890!8.37e-09!41;UBERON:0006240!8.37e-09!41;UBERON:0002346!8.59e-09!90;UBERON:0003075!8.79e-09!86;UBERON:0007284!8.79e-09!86;UBERON:0003080!9.67e-09!42;UBERON:0001893!1.98e-08!34;UBERON:0000033!2.07e-08!123;UBERON:0000153!2.17e-08!129;UBERON:0007811!2.17e-08!129;UBERON:0000924!2.57e-08!173;UBERON:0006601!2.57e-08!173;UBERON:0002619!3.08e-08!22;UBERON:0004121!3.23e-08!169;UBERON:0002791!4.38e-08!33;UBERON:0007023!7.59e-08!115;UBERON:0000956!1.83e-07!25;UBERON:0000203!1.83e-07!25;UBERON:0001950!3.16e-07!20;UBERON:0003056!8.26e-07!61 | |ontology_enrichment_uberon=UBERON:0001017!6.38e-13!82;UBERON:0005743!6.56e-12!86;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0001049!3.96e-10!57;UBERON:0005068!3.96e-10!57;UBERON:0006241!3.96e-10!57;UBERON:0007135!3.96e-10!57;UBERON:0000073!4.04e-10!94;UBERON:0001016!4.04e-10!94;UBERON:0002020!7.53e-10!34;UBERON:0003528!7.53e-10!34;UBERON:0002616!2.53e-09!59;UBERON:0001869!5.34e-09!32;UBERON:0002780!8.37e-09!41;UBERON:0001890!8.37e-09!41;UBERON:0006240!8.37e-09!41;UBERON:0002346!8.59e-09!90;UBERON:0003075!8.79e-09!86;UBERON:0007284!8.79e-09!86;UBERON:0003080!9.67e-09!42;UBERON:0001893!1.98e-08!34;UBERON:0000033!2.07e-08!123;UBERON:0000153!2.17e-08!129;UBERON:0007811!2.17e-08!129;UBERON:0000924!2.57e-08!173;UBERON:0006601!2.57e-08!173;UBERON:0002619!3.08e-08!22;UBERON:0004121!3.23e-08!169;UBERON:0002791!4.38e-08!33;UBERON:0007023!7.59e-08!115;UBERON:0000956!1.83e-07!25;UBERON:0000203!1.83e-07!25;UBERON:0001950!3.16e-07!20;UBERON:0003056!8.26e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.63e-08;34!UBERON:0002020;1.63e-08;34!UBERON:0001869;2.25e-08;32!UBERON:0002619;2.92e-08;22!UBERON:0002791;3.65e-08;32!UBERON:0000956;1.52e-07;25!UBERON:0000203;1.52e-07;25!UBERON:0001893;1.59e-07;34!UBERON:0001950;2.99e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.63e-08;34!UBERON:0002020;1.63e-08;34!UBERON:0001869;2.25e-08;32!UBERON:0002619;2.92e-08;22!UBERON:0002791;3.65e-08;32!UBERON:0000956;1.52e-07;25!UBERON:0000203;1.52e-07;25!UBERON:0001893;1.59e-07;34!UBERON:0001950;2.99e-07;20 | ||
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| ||
|short_description=p@chr16:11998033..11998052,- | |short_description=p@chr16:11998033..11998052,- | ||
}} | }} |
Latest revision as of 06:16, 25 July 2015
Short description: | p@chr16:11998033..11998052, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:11998033..11998052, - |
Coexpression cluster: | C3534_nonsmall_left_osteosarcoma_tongue_chronic_breast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.73e-13 | 81 |
organ system subdivision | 4.64e-12 | 223 |
nervous system | 5.74e-11 | 89 |
brain | 1.78e-10 | 68 |
future brain | 1.78e-10 | 68 |
neural tube | 3.44e-10 | 56 |
neural rod | 3.44e-10 | 56 |
future spinal cord | 3.44e-10 | 56 |
neural keel | 3.44e-10 | 56 |
brain grey matter | 7.52e-10 | 34 |
gray matter | 7.52e-10 | 34 |
regional part of nervous system | 1.15e-09 | 53 |
regional part of brain | 1.15e-09 | 53 |
neural plate | 2.90e-09 | 82 |
presumptive neural plate | 2.90e-09 | 82 |
neurectoderm | 2.96e-09 | 86 |
cerebral hemisphere | 5.34e-09 | 32 |
regional part of forebrain | 8.36e-09 | 41 |
forebrain | 8.36e-09 | 41 |
anterior neural tube | 8.36e-09 | 41 |
future forebrain | 8.36e-09 | 41 |
regional part of telencephalon | 8.53e-09 | 32 |
ectoderm-derived structure | 1.58e-08 | 171 |
ectoderm | 1.58e-08 | 171 |
presumptive ectoderm | 1.58e-08 | 171 |
telencephalon | 1.98e-08 | 34 |
regional part of cerebral cortex | 3.08e-08 | 22 |
ecto-epithelium | 6.13e-08 | 104 |
adult organism | 1.57e-07 | 114 |
cerebral cortex | 1.83e-07 | 25 |
pallium | 1.83e-07 | 25 |
neocortex | 3.16e-07 | 20 |
pre-chordal neural plate | 5.76e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.56e-14 | 235 |
disease of cellular proliferation | 5.86e-14 | 239 |
organ system cancer | 8.53e-12 | 137 |
carcinoma | 2.91e-09 | 106 |
hematologic cancer | 1.29e-08 | 51 |
immune system cancer | 1.29e-08 | 51 |
cell type cancer | 1.26e-07 | 143 |