FFCP PHASE1:Hg19::chr17:32583293..32583323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:32583293..32583323,- | |||
|coexpression_cluster_id=C874 | |||
|description=CAGE_peak_at_chr17:32583293..32583323,- | |description=CAGE_peak_at_chr17:32583293..32583323,- | ||
|id=chr17:32583293..32583323,- | |id=chr17:32583293..32583323,- | ||
|ontology_enrichment_celltype=CL:0002194!3.47e-15!63;CL:0000576!3.47e-15!63;CL:0000040!3.47e-15!63;CL:0000559!3.47e-15!63;CL:0002009!2.05e-14!65;CL:0002057!2.61e-14!42;CL:0000839!1.30e-13!70;CL:0000557!2.79e-13!71;CL:0000860!7.62e-13!45;CL:0000048!1.84e-12!430;CL:0000723!6.86e-12!436;CL:0000393!8.53e-12!60;CL:0000211!8.53e-12!60;CL:0000766!9.19e-12!76;CL:0000187!9.69e-12!54;CL:0000222!1.04e-11!119;CL:0000034!3.70e-11!444;CL:0000680!1.05e-10!57;CL:0000056!1.05e-10!57;CL:0000355!1.05e-10!57;CL:0000192!1.20e-10!42;CL:0000514!1.20e-10!42;CL:0000359!1.44e-10!32;CL:0000183!4.44e-10!59;CL:0002595!1.76e-08!5;CL:0002371!3.00e-08!591;CL:0000144!1.02e-07!625;CL:0000235!3.06e-07!10 | |ontology_enrichment_celltype=CL:0002194!3.47e-15!63;CL:0000576!3.47e-15!63;CL:0000040!3.47e-15!63;CL:0000559!3.47e-15!63;CL:0002009!2.05e-14!65;CL:0002057!2.61e-14!42;CL:0000839!1.30e-13!70;CL:0000557!2.79e-13!71;CL:0000860!7.62e-13!45;CL:0000048!1.84e-12!430;CL:0000723!6.86e-12!436;CL:0000393!8.53e-12!60;CL:0000211!8.53e-12!60;CL:0000766!9.19e-12!76;CL:0000187!9.69e-12!54;CL:0000222!1.04e-11!119;CL:0000034!3.70e-11!444;CL:0000680!1.05e-10!57;CL:0000056!1.05e-10!57;CL:0000355!1.05e-10!57;CL:0000192!1.20e-10!42;CL:0000514!1.20e-10!42;CL:0000359!1.44e-10!32;CL:0000183!4.44e-10!59;CL:0002595!1.76e-08!5;CL:0002371!3.00e-08!591;CL:0000144!1.02e-07!625;CL:0000235!3.06e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.83e-30;39!CL:0000234;5.83e-30;39!CL:0002595;2.76e-28;5!CL:0000860;4.02e-27;33!CL:0002057;4.02e-27;33!CL:0000235;2.32e-16;6!CL:0000576;1.31e-13;48!CL:0002593;1.92e-12;2!CL:0002138;2.64e-09;6!CL:0000766;2.81e-09;69!CL:0000359;3.51e-09;32!CL:0002568;6.87e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.12e-32,48;CL:0000234,8.12e-32,48;CL:0002595,5.51e-28,5;CL:0002194,1.02e-24,59;CL:0000576,1.02e-24,59;CL:0000040,1.02e-24,59;CL:0000559,1.02e-24,59;CL:0002009,8.41e-24,61;CL:0000839,9.45e-22,66;CL:0000557,2.23e-21,67;CL:0000860,6.75e-21,42;CL:0002057,6.75e-21,42;CL:0000766,1.16e-19,72;CL:0000235,2.20e-16,6;CL:0002593,2.88e-12,2;CL:0000763,5.76e-12,108;CL:0000049,5.76e-12,108;CL:0002087,5.00e-11,115;CL:0002031,2.01e-10,120;CL:0000359,4.07e-10,32;CL:0005020,2.36e-09,6;CL:0002138,2.36e-09,6;CL:0005022,2.36e-09,6;CL:0000738,8.57e-09,136;CL:0000048,1.22e-08,427;CL:0000723,1.97e-08,433;CL:0000034,3.64e-08,441;CL:0000192,3.09e-07,43;CL:0000514,3.09e-07,43;CL:0002032,6.68e-07,161;CL:0000837,6.68e-07,161;CL:0002568,7.29e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-15;42!CL:0005022;2.64e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.24e-20!167;UBERON:0003081!6.05e-13!216;UBERON:0000055!2.81e-12!69;UBERON:0002049!7.58e-12!79;UBERON:0007798!7.58e-12!79;UBERON:0002371!1.38e-11!80;UBERON:0001637!3.51e-11!42;UBERON:0003509!3.51e-11!42;UBERON:0004572!3.51e-11!42;UBERON:0001474!6.39e-11!86;UBERON:0001981!8.77e-11!60;UBERON:0007500!8.77e-11!60;UBERON:0004537!8.77e-11!60;UBERON:0006965!8.77e-11!60;UBERON:0004765!5.55e-10!101;UBERON:0001434!5.55e-10!101;UBERON:0004872!1.00e-09!84;UBERON:0004535!1.21e-09!110;UBERON:0001134!1.69e-09!61;UBERON:0002036!1.69e-09!61;UBERON:0003082!1.69e-09!61;UBERON:0001009!4.23e-09!113;UBERON:0002385!5.87e-09!63;UBERON:0001015!5.87e-09!63;UBERON:0000383!5.87e-09!63;UBERON:0002405!6.32e-09!115;UBERON:0004573!6.41e-09!33;UBERON:0004571!6.41e-09!33;UBERON:0003834!1.76e-08!5;UBERON:0001533!1.76e-08!5;UBERON:0002193!3.13e-08!112;UBERON:0004290!3.39e-08!70;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448;UBERON:0000486!2.82e-07!82;UBERON:0002390!4.26e-07!102;UBERON:0003061!4.26e-07!102;UBERON:0000914!5.02e-07!83;UBERON:0002329!5.02e-07!83;UBERON:0003077!5.02e-07!83;UBERON:0003059!5.02e-07!83;UBERON:0007282!5.02e-07!83;UBERON:0009618!5.02e-07!83;UBERON:0007285!5.02e-07!83;UBERON:0003513!7.85e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.76e-28;5!UBERON:0001533;2.76e-28;5!UBERON:0003513;3.57e-20;7!UBERON:0002456;1.92e-12;2!UBERON:0004573;1.53e-08;33!UBERON:0004571;1.53e-08;33!UBERON:0001473;4.37e-07;8!UBERON:0004536;4.37e-07;8!UBERON:0006558;4.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.51e-28,5;UBERON:0001533,5.51e-28,5;UBERON:0002405,1.01e-20,93;UBERON:0003513,5.81e-20,7;UBERON:0002371,1.89e-18,76;UBERON:0002193,2.81e-17,108;UBERON:0001474,7.50e-17,82;UBERON:0003081,1.22e-16,203;UBERON:0002204,1.97e-16,167;UBERON:0004765,4.76e-15,90;UBERON:0002390,1.54e-13,98;UBERON:0003061,1.54e-13,98;UBERON:0001434,3.36e-13,100;UBERON:0002456,2.88e-12,2;UBERON:0000926,1.26e-10,315;UBERON:0004120,1.26e-10,315;UBERON:0006603,1.26e-10,315;UBERON:0004573,8.93e-10,33;UBERON:0004571,8.93e-10,33;UBERON:0000055,4.54e-08,68;UBERON:0001637,1.96e-07,42;UBERON:0003509,1.96e-07,42;UBERON:0004572,1.96e-07,42;UBERON:0001473,4.02e-07,8;UBERON:0004536,4.02e-07,8;UBERON:0006558,4.02e-07,8;UBERON:0002049,8.73e-07,78;UBERON:0007798,8.73e-07,78 | |||
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|short_description=p@chr17:32583293..32583323,- | |short_description=p@chr17:32583293..32583323,- | ||
}} | }} |
Latest revision as of 15:32, 25 July 2015
Short description: | p@chr17:32583293..32583323, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:32583293..32583323, - |
Coexpression cluster: | C874_Monocytederived_CD14_Mast_Lymphatic_Smooth_Neurons_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 5.51e-28 | 5 |
subclavian artery | 5.51e-28 | 5 |
immune system | 1.01e-20 | 93 |
trunk blood vessel | 5.81e-20 | 7 |
bone marrow | 1.89e-18 | 76 |
hemolymphoid system | 2.81e-17 | 108 |
bone element | 7.50e-17 | 82 |
lateral plate mesoderm | 1.22e-16 | 203 |
musculoskeletal system | 1.97e-16 | 167 |
skeletal element | 4.76e-15 | 90 |
hematopoietic system | 1.54e-13 | 98 |
blood island | 1.54e-13 | 98 |
skeletal system | 3.36e-13 | 100 |
internal thoracic artery | 2.88e-12 | 2 |
mesoderm | 1.26e-10 | 315 |
mesoderm-derived structure | 1.26e-10 | 315 |
presumptive mesoderm | 1.26e-10 | 315 |
systemic artery | 8.93e-10 | 33 |
systemic arterial system | 8.93e-10 | 33 |
vessel | 4.54e-08 | 68 |
artery | 1.96e-07 | 42 |
arterial blood vessel | 1.96e-07 | 42 |
arterial system | 1.96e-07 | 42 |
lymphatic vessel | 4.02e-07 | 8 |
lymph vasculature | 4.02e-07 | 8 |
lymphatic part of lymphoid system | 4.02e-07 | 8 |
vasculature | 8.73e-07 | 78 |
vascular system | 8.73e-07 | 78 |