FFCP PHASE1:Hg19::chr17:38612942..38613067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38612942..38613067,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612942..38613067,+ | |description=CAGE_peak_at_chr17:38612942..38613067,+ | ||
|id=chr17:38612942..38613067,+ | |id=chr17:38612942..38613067,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.67e-25!180;CL:0000222!3.12e-20!119;CL:0000183!5.39e-17!59;CL:0000680!1.83e-16!57;CL:0000056!1.83e-16!57;CL:0000355!1.83e-16!57;CL:0000187!3.38e-15!54;CL:0000057!2.82e-14!75;CL:0000393!6.53e-13!60;CL:0000211!6.53e-13!60;CL:0000192!6.59e-13!42;CL:0000514!6.59e-13!42;CL:0000359!5.53e-10!32;CL:0000220!8.82e-10!246;CL:0002321!1.18e-09!248 | |ontology_enrichment_celltype=CL:0000055!2.67e-25!180;CL:0000222!3.12e-20!119;CL:0000183!5.39e-17!59;CL:0000680!1.83e-16!57;CL:0000056!1.83e-16!57;CL:0000355!1.83e-16!57;CL:0000187!3.38e-15!54;CL:0000057!2.82e-14!75;CL:0000393!6.53e-13!60;CL:0000211!6.53e-13!60;CL:0000192!6.59e-13!42;CL:0000514!6.59e-13!42;CL:0000359!5.53e-10!32;CL:0000220!8.82e-10!246;CL:0002321!1.18e-09!248 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.74e-10;43!CL:0000359;6.83e-10;32!CL:0000187;1.93e-09;55!CL:0000393;4.30e-08;61!CL:0000211;4.30e-08;61!CL:0000134;3.09e-07;55!CL:0000057;5.71e-07;73!CL:0000723;8.67e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.26e-21,121;CL:0000680,1.72e-18,58;CL:0000056,1.72e-18,58;CL:0000355,1.72e-18,58;CL:0000187,4.96e-17,55;CL:0000057,7.85e-17,76;CL:0000192,3.99e-14,43;CL:0000514,3.99e-14,43;CL:0000393,7.17e-14,61;CL:0000211,7.17e-14,61;CL:0000359,2.14e-10,32;CL:0000048,1.02e-07,427;CL:0000723,6.02e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.74e-10;43!CL:0000355;1.39e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.28e-24!143;UBERON:0002100!2.52e-22!216;UBERON:0000914!5.94e-19!83;UBERON:0002329!5.94e-19!83;UBERON:0003077!5.94e-19!83;UBERON:0003059!5.94e-19!83;UBERON:0007282!5.94e-19!83;UBERON:0009618!5.94e-19!83;UBERON:0007285!5.94e-19!83;UBERON:0000490!6.26e-19!138;UBERON:0003914!1.11e-18!118;UBERON:0004290!3.63e-17!70;UBERON:0001134!4.57e-17!61;UBERON:0002036!4.57e-17!61;UBERON:0003082!4.57e-17!61;UBERON:0002385!5.82e-17!63;UBERON:0001015!5.82e-17!63;UBERON:0000383!5.82e-17!63;UBERON:0004872!1.15e-16!84;UBERON:0000486!2.34e-16!82;UBERON:0002049!7.42e-16!79;UBERON:0007798!7.42e-16!79;UBERON:0003104!2.06e-15!238;UBERON:0009142!2.06e-15!238;UBERON:0001981!9.03e-13!60;UBERON:0007500!9.03e-13!60;UBERON:0004537!9.03e-13!60;UBERON:0006965!9.03e-13!60;UBERON:0000481!1.02e-12!347;UBERON:0000475!1.31e-12!365;UBERON:0000055!2.01e-12!69;UBERON:0001009!2.67e-12!113;UBERON:0004535!4.15e-12!110;UBERON:0001637!1.08e-10!42;UBERON:0003509!1.08e-10!42;UBERON:0004572!1.08e-10!42;UBERON:0000119!3.13e-10!312;UBERON:0000477!4.59e-10!286;UBERON:0000483!1.07e-09!309;UBERON:0004573!2.47e-09!33;UBERON:0004571!2.47e-09!33;UBERON:0000926!1.43e-08!448;UBERON:0004120!1.43e-08!448;UBERON:0006603!1.43e-08!448;UBERON:0009569!4.98e-08!113;UBERON:0000468!5.03e-08!659;UBERON:0003103!2.28e-07!69;UBERON:0004111!2.84e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.46e-09;33!UBERON:0004571;4.46e-09;33!UBERON:0002385;1.50e-08;31!UBERON:0001015;1.50e-08;31!UBERON:0000383;1.50e-08;31!UBERON:0001637;3.12e-08;42!UBERON:0003509;3.12e-08;42!UBERON:0004572;3.12e-08;42!UBERON:0002384;2.79e-07;198!UBERON:0001013;2.91e-07;14 | |||
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| ||
|short_description=p@chr17:38612942..38613067,+ | |short_description=p@chr17:38612942..38613067,+ | ||
}} | }} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38612942..38613067, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612942..38613067, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.26e-21 | 121 |
muscle precursor cell | 1.72e-18 | 58 |
myoblast | 1.72e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-18 | 58 |
muscle cell | 4.96e-17 | 55 |
fibroblast | 7.85e-17 | 76 |
smooth muscle cell | 3.99e-14 | 43 |
smooth muscle myoblast | 3.99e-14 | 43 |
electrically responsive cell | 7.17e-14 | 61 |
electrically active cell | 7.17e-14 | 61 |
vascular associated smooth muscle cell | 2.14e-10 | 32 |
multi fate stem cell | 1.02e-07 | 427 |
somatic stem cell | 6.02e-07 | 433 |