FFCP PHASE1:Hg19::chr17:73630118..73630129,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73630118..73630129,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr17:73630118..73630129,+ | |description=CAGE_peak_at_chr17:73630118..73630129,+ | ||
|id=chr17:73630118..73630129,+ | |id=chr17:73630118..73630129,+ | ||
|ontology_enrichment_celltype=CL:0000784!1.39e-07!3 | |ontology_enrichment_celltype=CL:0000784!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.45e-25;3!CL:0000764;1.73e-18;2!CL:0000558;1.73e-18;2!CL:0000451;2.28e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.46e-25,3;CL:0000764,1.73e-18,2;CL:0000765,1.73e-18,2;CL:0000050,1.73e-18,2;CL:0000038,1.73e-18,2;CL:0000558,1.73e-18,2;CL:0000547,1.73e-18,2;CL:0000549,1.73e-18,2;CL:0000550,1.73e-18,2;CL:0000552,1.73e-18,2;CL:0000451,2.28e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.99e-09;1!UBERON:0005425;1.99e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000178;5.45e-35;15!UBERON:0000179;5.45e-35;15!UBERON:0000463;5.45e-35;15!UBERON:0005162;2.13e-17;2!UBERON:0000122;2.13e-17;2!UBERON:0002390;2.64e-14;32!UBERON:0001896;6.41e-12;3!UBERON:0005290;6.41e-12;3!UBERON:0002336;1.06e-09;1!UBERON:0011215;1.06e-09;1!UBERON:0001018;1.06e-09;1!UBERON:0002473;1.06e-09;1!UBERON:0005340;1.06e-09;1!UBERON:0003544;1.06e-09;1!UBERON:0005970;1.06e-09;1!UBERON:0002316;1.06e-09;1!UBERON:0001020;1.06e-09;1!UBERON:0002437;1.06e-09;1!UBERON:0002038;1.99e-09;1!UBERON:0000941;1.99e-09;1!UBERON:0001785;1.99e-09;1!UBERON:0002464;1.99e-09;1!UBERON:0004904;1.99e-09;1!UBERON:0001021;1.99e-09;1!UBERON:0009661;1.99e-09;1!UBERON:0002950;1.99e-09;1!UBERON:0001891;1.99e-09;1!UBERON:0002193;2.04e-08;42!UBERON:0007023;1.52e-07;114 | |||
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|short_description=p@chr17:73630118..73630129,+ | |short_description=p@chr17:73630118..73630129,+ | ||
}} | }} |
Latest revision as of 21:09, 25 July 2015
Short description: | p@chr17:73630118..73630129, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73630118..73630129, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.46e-25 | 3 |
erythroid lineage cell | 1.73e-18 | 2 |
erythroblast | 1.73e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.73e-18 | 2 |
erythroid progenitor cell | 1.73e-18 | 2 |
reticulocyte | 1.73e-18 | 2 |
proerythroblast | 1.73e-18 | 2 |
basophilic erythroblast | 1.73e-18 | 2 |
polychromatophilic erythroblast | 1.73e-18 | 2 |
orthochromatic erythroblast | 1.73e-18 | 2 |
dendritic cell | 2.28e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 5.58e-35 | 15 |
haemolymphatic fluid | 5.58e-35 | 15 |
organism substance | 5.58e-35 | 15 |
adult organism | 1.25e-20 | 114 |
multi cell component structure | 1.59e-17 | 2 |
neuron projection bundle | 1.59e-17 | 2 |
medulla oblongata | 6.59e-12 | 3 |
myelencephalon | 6.59e-12 | 3 |
future myelencephalon | 6.59e-12 | 3 |
corpus callosum | 8.91e-10 | 1 |
central nervous system cell part cluster | 8.91e-10 | 1 |
axon tract | 8.91e-10 | 1 |
intercerebral commissure | 8.91e-10 | 1 |
dorsal telencephalic commissure | 8.91e-10 | 1 |
brain white matter | 8.91e-10 | 1 |
brain commissure | 8.91e-10 | 1 |
white matter | 8.91e-10 | 1 |
nervous system commissure | 8.91e-10 | 1 |
cerebral hemisphere white matter | 8.91e-10 | 1 |
cranial nerve II | 1.76e-09 | 1 |
cranial nerve | 1.76e-09 | 1 |
nerve trunk | 1.76e-09 | 1 |
nerve connecting eye with brain | 1.76e-09 | 1 |
nerve | 1.76e-09 | 1 |
retinal neural layer | 1.76e-09 | 1 |
presumptive neural retina | 1.76e-09 | 1 |
substantia nigra | 2.46e-09 | 1 |
midbrain nucleus | 2.46e-09 | 1 |
regional part of midbrain | 2.46e-09 | 1 |
midbrain | 2.46e-09 | 1 |
presumptive midbrain | 2.46e-09 | 1 |
midbrain neural tube | 2.46e-09 | 1 |