FFCP PHASE1:Hg19::chr18:50329052..50329058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:50329052..50329058,+ | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr18:50329052..50329058,+ | |description=CAGE_peak_at_chr18:50329052..50329058,+ | ||
|id=chr18:50329052..50329058,+ | |id=chr18:50329052..50329058,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.08e-18;1!UBERON:0010122;1.51e-09;2 | |||
|ontology_enrichment_disease=DOID:171!1.49e-07!10 | |ontology_enrichment_disease=DOID:171!1.49e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;8.02e-16;10!DOID:3095;1.64e-07;22!DOID:2994;1.64e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.83e-16,10;DOID:3095,1.62e-07,22;DOID:2994,1.62e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;2.02e-38;4!UBERON:0000923;2.02e-38;4!UBERON:0010316;2.02e-38;4!UBERON:0005291;2.02e-38;4!UBERON:0002050;6.63e-31;5!UBERON:0005423;6.63e-31;5!UBERON:0000029;9.48e-18;1!UBERON:0000922;2.61e-16;49!UBERON:0001950;7.64e-13;20!UBERON:0002780;1.46e-12;41!UBERON:0001890;1.46e-12;41!UBERON:0002791;5.49e-12;32!UBERON:0001869;7.05e-12;32!UBERON:0002619;9.35e-12;22!UBERON:0003528;1.37e-10;34!UBERON:0002020;1.37e-10;34!UBERON:0000956;1.95e-10;25!UBERON:0000203;1.95e-10;25!UBERON:0001871;2.35e-10;6!UBERON:0001905;1.51e-09;2!UBERON:0001873;1.51e-09;2!UBERON:0002757;1.51e-09;2!UBERON:0010134;1.51e-09;2!UBERON:0005408;1.51e-09;2!UBERON:0001899;1.51e-09;2!UBERON:0001893;2.67e-09;34!UBERON:0000073;6.69e-07;53!UBERON:0002616;6.69e-07;53!UBERON:0005383;8.86e-07;3!UBERON:0005382;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.26e-18,1;UBERON:0002346,1.00e-14,86;UBERON:0002780,6.97e-14,41;UBERON:0001890,6.97e-14,41;UBERON:0003080,6.97e-14,41;UBERON:0006240,6.97e-14,41;UBERON:0001950,8.92e-13,20;UBERON:0002791,1.79e-12,32;UBERON:0001869,1.79e-12,32;UBERON:0003528,9.16e-12,34;UBERON:0002020,9.16e-12,34;UBERON:0001893,9.16e-12,34;UBERON:0002619,1.08e-11,22;UBERON:0000073,9.26e-11,53;UBERON:0002616,9.26e-11,53;UBERON:0000956,2.21e-10,25;UBERON:0000203,2.21e-10,25;UBERON:0001871,2.58e-10,6;UBERON:0001049,3.49e-10,56;UBERON:0005068,3.49e-10,56;UBERON:0006241,3.49e-10,56;UBERON:0007135,3.49e-10,56;UBERON:0001873,1.22e-09,2;UBERON:0010122,1.22e-09,2;UBERON:0001905,1.33e-09,2;UBERON:0002757,1.33e-09,2;UBERON:0010134,1.33e-09,2;UBERON:0005408,1.33e-09,2;UBERON:0001899,1.33e-09,2;UBERON:0003056,2.41e-09,61;UBERON:0000955,2.99e-08,68;UBERON:0006238,2.99e-08,68;UBERON:0004121,5.59e-07,171;UBERON:0000924,5.59e-07,171;UBERON:0006601,5.59e-07,171;UBERON:0001017,6.45e-07,81;UBERON:0003075,6.45e-07,82;UBERON:0007284,6.45e-07,82;UBERON:0005383,7.70e-07,3;UBERON:0005382,7.70e-07,3 | |||
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|short_description=p@chr18:50329052..50329058,+ | |short_description=p@chr18:50329052..50329058,+ | ||
}} | }} |
Latest revision as of 01:18, 26 July 2015
Short description: | p@chr18:50329052..50329058, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:50329052..50329058, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.83e-16 | 10 |
germ cell and embryonal cancer | 1.62e-07 | 22 |
germ cell cancer | 1.62e-07 | 22 |