FFCP PHASE1:Hg19::chr18:55922739..55922756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:55922739..55922756,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr18:55922739..55922756,+ | |description=CAGE_peak_at_chr18:55922739..55922756,+ | ||
|id=chr18:55922739..55922756,+ | |id=chr18:55922739..55922756,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.35e-15!9;CL:0000515!5.60e-10!4 | |ontology_enrichment_celltype=CL:0000188!3.35e-15!9;CL:0000515!5.60e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000056;9.86e-22;4!CL:0000680;6.34e-19;7!CL:0000515;1.60e-16;3!CL:0000188;1.03e-14;9!CL:0000228;6.24e-07;1!CL:0002372;6.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.23e-21,4;CL:0000188,1.32e-14,9;CL:0000228,6.24e-07,1;CL:0002372,6.24e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;9.86e-22;4!UBERON:0004140;3.32e-07;1!UBERON:0010226;3.51e-07;1!UBERON:0010227;3.95e-07;1!UBERON:0000358;5.26e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.02e-12;2!DOID:178;3.72e-07;1!DOID:326;3.72e-07;1!DOID:3978;3.72e-07;1!DOID:3394;3.72e-07;1!DOID:5844;3.72e-07;1!DOID:1287;9.27e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.02e-12,2;DOID:178,3.73e-07,1;DOID:326,3.73e-07,1;DOID:3978,3.73e-07,1;DOID:3394,3.73e-07,1;DOID:5844,3.73e-07,1;DOID:1287,9.27e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;1.73e-46;16!UBERON:0002036;1.73e-46;16!UBERON:0002385;3.78e-22;31!UBERON:0001015;3.78e-22;31!UBERON:0000383;3.78e-22;31!UBERON:0007100;1.52e-13;25!UBERON:0005090;2.26e-12;2!UBERON:0001630;2.26e-12;2!UBERON:0000341;6.70e-12;2!UBERON:0004151;1.05e-08;3!UBERON:0003978;1.76e-08;3!UBERON:0000946;1.76e-08;3!UBERON:0001723;1.93e-08;3!UBERON:0001033;1.93e-08;3!UBERON:0001389;2.95e-07;1!UBERON:0000026;2.95e-07;1!UBERON:0008784;2.95e-07;1!UBERON:0006058;2.95e-07;1!UBERON:0003663;2.95e-07;1!UBERON:0004256;2.95e-07;1!UBERON:0004708;2.95e-07;1!UBERON:0002101;2.95e-07;1!UBERON:0004709;2.95e-07;1!UBERON:0002529;2.95e-07;1!UBERON:0010538;2.95e-07;1!UBERON:0003661;2.95e-07;1!UBERON:0010890;2.95e-07;1!UBERON:0002471;2.95e-07;1!UBERON:0001383;2.95e-07;1!UBERON:0010758;2.95e-07;1!UBERON:0010707;2.95e-07;1!UBERON:0000978;2.95e-07;1!UBERON:0002103;2.95e-07;1!UBERON:0001665;2.95e-07;1!UBERON:0003823;2.95e-07;1!UBERON:0000154;2.95e-07;1!UBERON:0010709;2.95e-07;1!UBERON:0002084;3.51e-07;1!UBERON:0002082;3.51e-07;1!UBERON:0002079;3.95e-07;1!UBERON:0002146;5.26e-07;1!UBERON:0005623;5.26e-07;1!UBERON:0002135;5.89e-07;1!UBERON:0002426;8.75e-07;1!UBERON:0003831;8.75e-07;1!UBERON:0003898;8.75e-07;1!UBERON:0004830;8.75e-07;1!UBERON:0003830;8.75e-07;1!UBERON:0005175;8.75e-07;1!UBERON:0001774;8.75e-07;1!UBERON:0001103;8.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.90e-12,27;UBERON:0005090,2.27e-12,2;UBERON:0001630,2.27e-12,2;UBERON:0000341,6.17e-12,2;UBERON:0001134,3.48e-10,62;UBERON:0002036,3.48e-10,62;UBERON:0003082,3.48e-10,62;UBERON:0002385,8.54e-10,64;UBERON:0001015,8.54e-10,64;UBERON:0000383,8.54e-10,64;UBERON:0003103,1.54e-09,68;UBERON:0004151,1.05e-08,3;UBERON:0002329,1.33e-08,71;UBERON:0003059,1.33e-08,71;UBERON:0007282,1.33e-08,71;UBERON:0004290,1.33e-08,71;UBERON:0009618,1.33e-08,71;UBERON:0003978,1.76e-08,3;UBERON:0009751,1.76e-08,3;UBERON:0000946,1.76e-08,3;UBERON:0002523,1.76e-08,3;UBERON:0005983,1.76e-08,3;UBERON:0002165,1.76e-08,3;UBERON:0002062,1.76e-08,3;UBERON:0007280,1.76e-08,3;UBERON:0003077,1.88e-08,72;UBERON:0007285,1.88e-08,72;UBERON:0001723,1.90e-08,3;UBERON:0001033,1.90e-08,3;UBERON:0010056,1.90e-08,3;UBERON:0007524,2.64e-08,73;UBERON:0007503,1.25e-07,78;UBERON:0005418,2.95e-07,1;UBERON:0001389,2.95e-07,1;UBERON:0000026,2.95e-07,1;UBERON:0008784,2.95e-07,1;UBERON:0006058,2.95e-07,1;UBERON:0003663,2.95e-07,1;UBERON:0004256,2.95e-07,1;UBERON:0004708,2.95e-07,1;UBERON:0002101,2.95e-07,1;UBERON:0004709,2.95e-07,1;UBERON:0002529,2.95e-07,1;UBERON:0010538,2.95e-07,1;UBERON:0003661,2.95e-07,1;UBERON:0010890,2.95e-07,1;UBERON:0002471,2.95e-07,1;UBERON:0001383,2.95e-07,1;UBERON:0004357,2.95e-07,1;UBERON:0004347,2.95e-07,1;UBERON:0005420,2.95e-07,1;UBERON:0005732,2.95e-07,1;UBERON:0010758,2.95e-07,1;UBERON:0010707,2.95e-07,1;UBERON:0000978,2.95e-07,1;UBERON:0002103,2.95e-07,1;UBERON:0001665,2.95e-07,1;UBERON:0003823,2.95e-07,1;UBERON:0000154,2.95e-07,1;UBERON:0010709,2.95e-07,1;UBERON:0005733,2.95e-07,1;UBERON:0005730,2.95e-07,1;UBERON:0002084,3.52e-07,1;UBERON:0002082,3.52e-07,1;UBERON:0010226,3.52e-07,1;UBERON:0002079,3.95e-07,1;UBERON:0000486,4.91e-07,83;UBERON:0002146,5.26e-07,1;UBERON:0005623,5.26e-07,1;UBERON:0002135,5.89e-07,1;UBERON:0005256,8.54e-07,122;UBERON:0002426,8.75e-07,1;UBERON:0003831,8.75e-07,1;UBERON:0003898,8.75e-07,1;UBERON:0004830,8.75e-07,1;UBERON:0003830,8.75e-07,1;UBERON:0005175,8.75e-07,1;UBERON:0001774,8.75e-07,1;UBERON:0001103,8.75e-07,1;UBERON:0010084,8.75e-07,1;UBERON:0007023,9.56e-07,114 | |||
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|short_description=p@chr18:55922739..55922756,+ | |short_description=p@chr18:55922739..55922756,+ | ||
}} | }} |
Latest revision as of 01:33, 26 July 2015
Short description: | p@chr18:55922739..55922756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:55922739..55922756, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.23e-21 | 4 |
cell of skeletal muscle | 1.32e-14 | 9 |
multinucleate cell | 6.24e-07 | 1 |
myotube | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.02e-12 | 2 |
vascular disease | 3.73e-07 | 1 |
ischemia | 3.73e-07 | 1 |
extrinsic cardiomyopathy | 3.73e-07 | 1 |
myocardial ischemia | 3.73e-07 | 1 |
myocardial infarction | 3.73e-07 | 1 |
cardiovascular system disease | 9.27e-07 | 4 |