FFCP PHASE1:Hg19::chr19:12903672..12903694,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12903672..12903694,-
|short_description=p4@CU678639,p4@CU679368
|description=CAGE_peak_4_at_CU678639_5end,CAGE_peak_4_at_CU679368_5end
|association_with_t...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_CU678639,CU679368_5end | |||
|cluster_id=chr19:12903672..12903694,- | |||
|description=CAGE_peak_4_at_CU678639_5end,CAGE_peak_4_at_CU679368_5end | |||
|id=chr19:12903672..12903694,- | |||
|ontology_enrichment_celltype=CL:0002057!2.99e-16!42;CL:0000860!1.41e-15!45;CL:0000738!5.81e-14!140;CL:0000766!2.13e-13!76;CL:0002087!2.45e-13!119;CL:0002031!5.10e-13!124;CL:0000557!8.32e-13!71;CL:0002009!1.60e-12!65;CL:0002194!7.55e-12!63;CL:0000576!7.55e-12!63;CL:0000040!7.55e-12!63;CL:0000559!7.55e-12!63;CL:0000839!1.13e-11!70;CL:0000988!2.89e-09!182;CL:0000037!7.99e-09!172;CL:0000566!7.99e-09!172;CL:0002032!1.07e-08!165;CL:0000837!1.07e-08!165;CL:0000763!4.88e-07!112;CL:0000049!4.88e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.94e-11;6!CL:0000226;9.27e-09;3!CL:0000842;9.27e-09;3!CL:0000473;1.57e-08;39!CL:0000234;1.57e-08;39!CL:0000898;1.80e-08;3!CL:0000791;2.58e-08;18!CL:0000789;2.58e-08;18!CL:0002419;2.58e-08;18!CL:0000623;3.30e-08;3!CL:0000576;1.07e-07;48!CL:0000860;4.04e-07;33!CL:0002057;4.04e-07;33!CL:0000766;5.41e-07;69!CL:0000084;5.93e-07;25!CL:0002393;9.73e-07;6!CL:0002397;9.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.35e-21,136;CL:0002087,5.90e-20,115;CL:0002031,2.88e-17,120;CL:0000988,1.14e-15,177;CL:0000473,2.50e-15,48;CL:0000234,2.50e-15,48;CL:0000037,3.40e-15,168;CL:0000766,2.34e-14,72;CL:0002032,3.03e-13,161;CL:0000837,3.03e-13,161;CL:0000860,2.19e-12,42;CL:0002057,2.19e-12,42;CL:0000839,6.75e-12,66;CL:0000557,1.22e-11,67;CL:0002194,3.13e-11,59;CL:0000576,3.13e-11,59;CL:0000040,3.13e-11,59;CL:0000559,3.13e-11,59;CL:0000624,5.11e-11,6;CL:0002009,1.05e-10,61;CL:0000623,1.20e-08,3;CL:0000825,1.20e-08,3;CL:0000226,1.76e-08,3;CL:0000842,1.76e-08,3;CL:0002320,2.45e-08,361;CL:0000898,2.70e-08,3;CL:0000791,2.87e-08,18;CL:0000789,2.87e-08,18;CL:0002420,2.87e-08,18;CL:0002419,2.87e-08,18;CL:0000790,2.87e-08,18;CL:0000763,1.43e-07,108;CL:0000049,1.43e-07,108;CL:0000084,5.84e-07,25;CL:0000827,5.84e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.81e-09;42!CL:0000790;2.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.94e-17!102;UBERON:0003061!2.94e-17!102;UBERON:0002193!1.34e-15!112;UBERON:0002371!1.11e-12!80;UBERON:0001474!3.91e-11!86;UBERON:0004765!6.21e-10!101;UBERON:0001434!6.21e-10!101;UBERON:0002405!2.79e-08!115;UBERON:0003081!7.96e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.07e-10;8!UBERON:0000982;1.07e-10;8!UBERON:0004770;1.07e-10;8!UBERON:0011135;4.30e-08;5!UBERON:0002216;4.30e-08;5!UBERON:0011134;4.30e-08;5!UBERON:0002209;4.30e-08;5!UBERON:0002213;4.30e-08;5!UBERON:0007844;4.30e-08;5!UBERON:0011138;4.30e-08;5!UBERON:0001130;4.30e-08;5!UBERON:0001066;4.30e-08;5!UBERON:0001468;4.30e-08;5!UBERON:0000178;1.79e-07;15!UBERON:0000179;1.79e-07;15!UBERON:0000463;1.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-15,98;UBERON:0003061,1.51e-15,98;UBERON:0002193,1.70e-14,108;UBERON:0001434,6.34e-14,100;UBERON:0004765,1.19e-13,90;UBERON:0004905,8.20e-11,8;UBERON:0000982,8.20e-11,8;UBERON:0004770,8.20e-11,8;UBERON:0002371,8.90e-11,76;UBERON:0001474,9.11e-11,82;UBERON:0002405,1.29e-09,93;UBERON:0011135,5.23e-08,5;UBERON:0002216,5.23e-08,5;UBERON:0011134,5.23e-08,5;UBERON:0002209,5.23e-08,5;UBERON:0002213,5.23e-08,5;UBERON:0005856,5.23e-08,5;UBERON:0005866,5.23e-08,5;UBERON:0005863,5.23e-08,5;UBERON:0007844,5.23e-08,5;UBERON:0011138,5.23e-08,5;UBERON:0001130,5.23e-08,5;UBERON:0001066,5.23e-08,5;UBERON:0001468,5.23e-08,5;UBERON:0002384,9.19e-08,371;UBERON:0000178,1.81e-07,15;UBERON:0000179,1.81e-07,15;UBERON:0000463,1.81e-07,15;UBERON:0002204,9.73e-07,167 | |||
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| ||
|short_description=p4@CU678639,p4@CU679368 | |||
}} | }} |
Latest revision as of 03:48, 26 July 2015
Short description: | p4@CU678639, p4@CU679368 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU678639_5end, CAGE_peak_4_at_CU679368_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_CU678639, CU679368_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-15 | 98 |
blood island | 1.51e-15 | 98 |
hemolymphoid system | 1.70e-14 | 108 |
skeletal system | 6.34e-14 | 100 |
skeletal element | 1.19e-13 | 90 |
articulation | 8.20e-11 | 8 |
skeletal joint | 8.20e-11 | 8 |
articular system | 8.20e-11 | 8 |
bone marrow | 8.90e-11 | 76 |
bone element | 9.11e-11 | 82 |
immune system | 1.29e-09 | 93 |
intervertebral cartilage | 5.23e-08 | 5 |
symphysis | 5.23e-08 | 5 |
nonsynovial joint | 5.23e-08 | 5 |
fibrous joint | 5.23e-08 | 5 |
cartilaginous joint | 5.23e-08 | 5 |
developing mesenchymal condensation | 5.23e-08 | 5 |
pre-cartilage condensation | 5.23e-08 | 5 |
cartilaginous condensation | 5.23e-08 | 5 |
cartilage element | 5.23e-08 | 5 |
post-cranial axial skeletal system | 5.23e-08 | 5 |
vertebral column | 5.23e-08 | 5 |
intervertebral disk | 5.23e-08 | 5 |
intervertebral joint | 5.23e-08 | 5 |
connective tissue | 9.19e-08 | 371 |
blood | 1.81e-07 | 15 |
haemolymphatic fluid | 1.81e-07 | 15 |
organism substance | 1.81e-07 | 15 |
musculoskeletal system | 9.73e-07 | 167 |