FFCP PHASE1:Hg19::chr19:1300274..1300279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1300274..1300279,+ | |||
|description=CAGE_peak_at_chr19:1300274..1300279,+ | |description=CAGE_peak_at_chr19:1300274..1300279,+ | ||
|id=chr19:1300274..1300279,+ | |id=chr19:1300274..1300279,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.13e-12!25;CL:0000066!2.68e-10!254;CL:0000095!6.30e-08!17;CL:0000123!6.30e-08!17;CL:0000133!1.87e-07!59;CL:0000243!5.38e-07!15;CL:0000125!5.38e-07!15;CL:0000030!5.38e-07!15;CL:0000339!5.38e-07!15 | |ontology_enrichment_celltype=CL:0002319!6.13e-12!25;CL:0000066!2.68e-10!254;CL:0000095!6.30e-08!17;CL:0000123!6.30e-08!17;CL:0000133!1.87e-07!59;CL:0000243!5.38e-07!15;CL:0000125!5.38e-07!15;CL:0000030!5.38e-07!15;CL:0000339!5.38e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.54e-18;25!CL:0000095;1.15e-11;17!CL:0000540;1.41e-11;6!CL:0000404;1.41e-11;6!CL:0000243;2.84e-11;15!CL:0000125;2.84e-11;15!CL:0002322;7.21e-10;5!CL:0000128;6.98e-08;7!CL:0000126;6.98e-08;7!CL:0000127;6.98e-08;7!CL:0000039;2.46e-07;7!CL:0000586;2.46e-07;7!CL:0000306;2.48e-07;4!CL:0002222;2.48e-07;4!CL:0002224;2.48e-07;4!CL:0000182;6.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.02e-18,25;CL:0000133,1.51e-14,59;CL:0000095,1.35e-11,17;CL:0000123,1.35e-11,17;CL:0000540,1.43e-11,6;CL:0000031,1.43e-11,6;CL:0000404,1.43e-11,6;CL:0000243,3.32e-11,15;CL:0000125,3.32e-11,15;CL:0000030,3.32e-11,15;CL:0000339,3.32e-11,15;CL:0000221,1.36e-10,72;CL:0002322,7.14e-10,5;CL:0000333,3.94e-09,41;CL:0000047,2.11e-08,8;CL:0000128,7.70e-08,7;CL:0000126,7.70e-08,7;CL:0000127,7.70e-08,7;CL:0002453,7.70e-08,7;CL:0000039,2.38e-07,7;CL:0000586,2.38e-07,7;CL:0000306,3.51e-07,4;CL:0002222,3.51e-07,4;CL:0002224,3.51e-07,4;CL:0000182,6.66e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;1.41e-11;6!CL:0000339;2.84e-11;15!UBERON:0006238;1.63e-08;10!CL:0000133;4.21e-08;59!UBERON:0009497;1.20e-07;13!UBERON:0004161;2.04e-07;11!UBERON:0003104;2.24e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!2.48e-13!143;DOID:305!3.30e-11!106;DOID:162!1.84e-07!235;DOID:14566!8.97e-07!239 | |ontology_enrichment_disease=DOID:0050687!2.48e-13!143;DOID:305!3.30e-11!106;DOID:162!1.84e-07!235;DOID:14566!8.97e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.99e-26!86;UBERON:0000073!4.66e-24!94;UBERON:0001016!4.66e-24!94;UBERON:0001017!9.40e-24!82;UBERON:0003075!1.17e-20!86;UBERON:0007284!1.17e-20!86;UBERON:0002346!1.23e-19!90;UBERON:0000955!5.34e-18!69;UBERON:0006238!5.34e-18!69;UBERON:0001049!2.14e-16!57;UBERON:0005068!2.14e-16!57;UBERON:0006241!2.14e-16!57;UBERON:0007135!2.14e-16!57;UBERON:0003056!8.62e-16!61;UBERON:0004121!8.68e-16!169;UBERON:0000924!2.34e-15!173;UBERON:0006601!2.34e-15!173;UBERON:0000033!1.21e-14!123;UBERON:0000153!7.37e-14!129;UBERON:0007811!7.37e-14!129;UBERON:0001893!2.21e-13!34;UBERON:0002791!4.85e-13!33;UBERON:0002020!5.90e-13!34;UBERON:0003528!5.90e-13!34;UBERON:0001869!9.98e-13!32;UBERON:0002616!1.27e-12!59;UBERON:0002780!2.36e-12!41;UBERON:0001890!2.36e-12!41;UBERON:0006240!2.36e-12!41;UBERON:0003080!8.90e-12!42;UBERON:0000956!2.12e-10!25;UBERON:0000203!2.12e-10!25;UBERON:0000064!3.65e-10!219;UBERON:0001950!4.00e-09!20;UBERON:0007625!5.93e-09!11;UBERON:0002619!9.71e-09!22;UBERON:0000481!1.10e-08!347;UBERON:0000160!1.66e-08!27;UBERON:0005409!1.76e-08!35;UBERON:0000922!5.99e-08!612;UBERON:0004921!6.86e-08!129;UBERON:0004185!6.86e-08!129;UBERON:0000062!9.00e-08!511;UBERON:0000063!9.37e-08!97 | |ontology_enrichment_uberon=UBERON:0005743!7.99e-26!86;UBERON:0000073!4.66e-24!94;UBERON:0001016!4.66e-24!94;UBERON:0001017!9.40e-24!82;UBERON:0003075!1.17e-20!86;UBERON:0007284!1.17e-20!86;UBERON:0002346!1.23e-19!90;UBERON:0000955!5.34e-18!69;UBERON:0006238!5.34e-18!69;UBERON:0001049!2.14e-16!57;UBERON:0005068!2.14e-16!57;UBERON:0006241!2.14e-16!57;UBERON:0007135!2.14e-16!57;UBERON:0003056!8.62e-16!61;UBERON:0004121!8.68e-16!169;UBERON:0000924!2.34e-15!173;UBERON:0006601!2.34e-15!173;UBERON:0000033!1.21e-14!123;UBERON:0000153!7.37e-14!129;UBERON:0007811!7.37e-14!129;UBERON:0001893!2.21e-13!34;UBERON:0002791!4.85e-13!33;UBERON:0002020!5.90e-13!34;UBERON:0003528!5.90e-13!34;UBERON:0001869!9.98e-13!32;UBERON:0002616!1.27e-12!59;UBERON:0002780!2.36e-12!41;UBERON:0001890!2.36e-12!41;UBERON:0006240!2.36e-12!41;UBERON:0003080!8.90e-12!42;UBERON:0000956!2.12e-10!25;UBERON:0000203!2.12e-10!25;UBERON:0000064!3.65e-10!219;UBERON:0001950!4.00e-09!20;UBERON:0007625!5.93e-09!11;UBERON:0002619!9.71e-09!22;UBERON:0000481!1.10e-08!347;UBERON:0000160!1.66e-08!27;UBERON:0005409!1.76e-08!35;UBERON:0000922!5.99e-08!612;UBERON:0004921!6.86e-08!129;UBERON:0004185!6.86e-08!129;UBERON:0000062!9.00e-08!511;UBERON:0000063!9.37e-08!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.29e-16;11!UBERON:0000160;4.03e-14;17!UBERON:0005409;7.45e-12;22!UBERON:0000970;2.45e-11;20!UBERON:0000922;3.39e-11;49!UBERON:0002104;1.23e-10;21!UBERON:0000019;3.48e-10;19!UBERON:0000047;3.48e-10;19!UBERON:0004088;3.48e-10;19!UBERON:0010230;3.48e-10;19!UBERON:0002108;1.59e-09;4!UBERON:0000020;2.00e-09;23!UBERON:0002423;5.31e-09;25!UBERON:0001456;6.21e-09;21!UBERON:0001032;6.73e-09;24!UBERON:0004456;6.73e-09;24!UBERON:0010077;2.48e-07;4!UBERON:0005389;2.48e-07;4!UBERON:0000484;2.48e-07;4!UBERON:0000965;2.48e-07;4!UBERON:0001803;2.48e-07;4!UBERON:0000488;3.14e-07;4!UBERON:0000059;8.14e-07;11 | |||
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| ||
|short_description=p@chr19:1300274..1300279,+ | |short_description=p@chr19:1300274..1300279,+ | ||
}} | }} |
Latest revision as of 03:51, 26 July 2015
Short description: | p@chr19:1300274..1300279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1300274..1300279, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.02e-18 | 25 |
neurectodermal cell | 1.51e-14 | 59 |
neuron associated cell | 1.35e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.35e-11 | 17 |
neuron | 1.43e-11 | 6 |
neuroblast | 1.43e-11 | 6 |
electrically signaling cell | 1.43e-11 | 6 |
glial cell (sensu Vertebrata) | 3.32e-11 | 15 |
glial cell | 3.32e-11 | 15 |
glioblast | 3.32e-11 | 15 |
glioblast (sensu Vertebrata) | 3.32e-11 | 15 |
ectodermal cell | 1.36e-10 | 72 |
embryonic stem cell | 7.14e-10 | 5 |
migratory neural crest cell | 3.94e-09 | 41 |
neuronal stem cell | 2.11e-08 | 8 |
oligodendrocyte | 7.70e-08 | 7 |
macroglial cell | 7.70e-08 | 7 |
astrocyte | 7.70e-08 | 7 |
oligodendrocyte precursor cell | 7.70e-08 | 7 |
germ line cell | 2.38e-07 | 7 |
germ cell | 2.38e-07 | 7 |
crystallin accumulating cell | 3.51e-07 | 4 |
vertebrate lens cell | 3.51e-07 | 4 |
lens epithelial cell | 3.51e-07 | 4 |
hepatocyte | 6.66e-07 | 12 |