FFCP PHASE1:Hg19::chr19:17392863..17392874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC108250_5end | |association_with_transcript=0bp_to_BC108250_5end | ||
|cluster_id=chr19:17392863..17392874,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_1_at_BC108250_5end | |description=CAGE_peak_1_at_BC108250_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.47e-08!5;CL:0000988!2.80e-07!182;CL:0000037!9.16e-07!172;CL:0000566!9.16e-07!172 | |ontology_enrichment_celltype=CL:0002322!1.47e-08!5;CL:0000988!2.80e-07!182;CL:0000037!9.16e-07!172;CL:0000566!9.16e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.50e-14;2!CL:0000558;9.50e-14;2!CL:0002322;3.20e-11;5!CL:0000540;7.37e-10;6!CL:0000404;7.37e-10;6 | |ontology_enrichment_celltype_v019=CL:0000764;9.50e-14;2!CL:0000558;9.50e-14;2!CL:0002322;3.20e-11;5!CL:0000540;7.37e-10;6!CL:0000404;7.37e-10;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.52e-14,2;CL:0000765,9.52e-14,2;CL:0000050,9.52e-14,2;CL:0000038,9.52e-14,2;CL:0000558,9.52e-14,2;CL:0000547,9.52e-14,2;CL:0000549,9.52e-14,2;CL:0000550,9.52e-14,2;CL:0000552,9.52e-14,2;CL:0002322,2.94e-11,5;CL:0000540,7.83e-10,6;CL:0000031,7.83e-10,6;CL:0000404,7.83e-10,6;CL:0002032,4.03e-08,161;CL:0000837,4.03e-08,161;CL:0000763,6.59e-08,108;CL:0000049,6.59e-08,108;CL:0000037,1.24e-07,168;CL:0000047,1.76e-07,8;CL:0000988,4.57e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000031;7.37e-10;6!UBERON:0005425;4.74e-07;1 | |ontology_enrichment_development_v019=CL:0000031;7.37e-10;6!UBERON:0005425;4.74e-07;1 | ||
|ontology_enrichment_disease=DOID:2531!1.06e-20!51;DOID:0060083!1.06e-20!51;DOID:1240!8.15e-15!39;DOID:8692!1.88e-13!31;DOID:162!1.21e-09!235;DOID:14566!1.34e-09!239;DOID:0060058!4.98e-09!10;DOID:0050686!1.81e-07!137 | |ontology_enrichment_disease=DOID:2531!1.06e-20!51;DOID:0060083!1.06e-20!51;DOID:1240!8.15e-15!39;DOID:8692!1.88e-13!31;DOID:162!1.21e-09!235;DOID:14566!1.34e-09!239;DOID:0060058!4.98e-09!10;DOID:0050686!1.81e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.29e-23;31!DOID:1240;5.84e-17;39!DOID:2531;3.97e-14;51!DOID:0060083;3.97e-14;51!DOID:8552;1.40e-07;1!DOID:1036;2.19e-07;8!DOID:12603;4.74e-07;1!DOID:225;4.74e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;1.29e-23;31!DOID:1240;5.84e-17;39!DOID:2531;3.97e-14;51!DOID:0060083;3.97e-14;51!DOID:8552;1.40e-07;1!DOID:1036;2.19e-07;8!DOID:12603;4.74e-07;1!DOID:225;4.74e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.80e-26,51;DOID:0060083,2.80e-26,51;DOID:8692,3.47e-25,31;DOID:1240,6.11e-23,39;DOID:0050686,4.66e-10,137;DOID:8552,1.20e-07,1;DOID:1036,2.05e-07,8;DOID:225,5.50e-07,1;DOID:12603,6.57e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.74e-07;1!UBERON:0001785;4.74e-07;1!UBERON:0002464;4.74e-07;1!UBERON:0004904;4.74e-07;1!UBERON:0001021;4.74e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000941;4.74e-07;1!UBERON:0001785;4.74e-07;1!UBERON:0002464;4.74e-07;1!UBERON:0004904;4.74e-07;1!UBERON:0001021;4.74e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.60e-07,1;UBERON:0001785,4.60e-07,1;UBERON:0002464,4.60e-07,1;UBERON:0004904,4.60e-07,1;UBERON:0001021,4.60e-07,1;UBERON:0003902,4.60e-07,1;UBERON:0005425,4.60e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,0,0,0,2.24654881682875,1.9903692548239,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,2.25300606146525,0.929551542956147,0.207322110030741,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.614942192715568,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4711518586317,15.9475625125189,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0.432807638929335,0,0,1.39705560002972,0,0.846694330895531,4.54470716384378,0,0.456469358066384,0.94007937463814,0,0,1.76646882614069,1.00899853595524,0,0,0,0,0.333698283423817,1.17232857241224,1.11362469558097,4.92349595790849,2.70455678475983,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,3.46088135876195,0,0,0,1.25966373927138,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.694499979733169,0,0,1.52581736317083,0,0,0,0,0,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,1.56980256395025,4.98635045700469,0,0,0.671286347903371,0,4.60916079043098,0,0,3.1097675715467,0.432777279484182,0,0,0,0.889563386041866,0.86494757262552,0.208843899010911,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34033500855552,3.57602535152808,4.56984371832104,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,10.0973800521687,0,0.113312091520126,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60994291965212,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,1.28030075632969,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0.436838552768056,0.848662649770126,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,1.98916222116275,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.327796715891087,0.506794004045748,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0.426467963801962,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.747091421144008,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,0,0,0,2.24654881682875,1.9903692548239,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,2.25300606146525,0.929551542956147,0.207322110030741,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.614942192715568,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4711518586317,15.9475625125189,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0.432807638929335,0,0,1.39705560002972,0,0.846694330895531,4.54470716384378,0,0.456469358066384,0.94007937463814,0,0,1.76646882614069,1.00899853595524,0,0,0,0,0.333698283423817,1.17232857241224,1.11362469558097,4.92349595790849,2.70455678475983,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,3.46088135876195,0,0,0,1.25966373927138,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.694499979733169,0,0,1.52581736317083,0,0,0,0,0,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,1.56980256395025,4.98635045700469,0,0,0.671286347903371,0,4.60916079043098,0,0,3.1097675715467,0.432777279484182,0,0,0,0.889563386041866,0.86494757262552,0.208843899010911,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34033500855552,3.57602535152808,4.56984371832104,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,10.0973800521687,0,0.113312091520126,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60994291965212,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,1.28030075632969,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0.436838552768056,0.848662649770126,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,1.98916222116275,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.327796715891087,0.506794004045748,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0.426467963801962,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.747091421144008,0,0,0,0,0,0,0,0 | ||
|short_description=p1@BC108250 | |short_description=p1@BC108250 | ||
}} | }} |
Latest revision as of 04:50, 26 July 2015
Short description: | p1@BC108250 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC108250_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_BC108250_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.52e-14 | 2 |
erythroblast | 9.52e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 9.52e-14 | 2 |
erythroid progenitor cell | 9.52e-14 | 2 |
reticulocyte | 9.52e-14 | 2 |
proerythroblast | 9.52e-14 | 2 |
basophilic erythroblast | 9.52e-14 | 2 |
polychromatophilic erythroblast | 9.52e-14 | 2 |
orthochromatic erythroblast | 9.52e-14 | 2 |
embryonic stem cell | 2.94e-11 | 5 |
neuron | 7.83e-10 | 6 |
neuroblast | 7.83e-10 | 6 |
electrically signaling cell | 7.83e-10 | 6 |
hematopoietic oligopotent progenitor cell | 4.03e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.03e-08 | 161 |
myeloid cell | 6.59e-08 | 108 |
common myeloid progenitor | 6.59e-08 | 108 |
hematopoietic stem cell | 1.24e-07 | 168 |
neuronal stem cell | 1.76e-07 | 8 |
hematopoietic cell | 4.57e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.60e-07 | 1 |
cranial nerve | 4.60e-07 | 1 |
nerve trunk | 4.60e-07 | 1 |
nerve connecting eye with brain | 4.60e-07 | 1 |
nerve | 4.60e-07 | 1 |
retinal neural layer | 4.60e-07 | 1 |
presumptive neural retina | 4.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.80e-26 | 51 |
immune system cancer | 2.80e-26 | 51 |
myeloid leukemia | 3.47e-25 | 31 |
leukemia | 6.11e-23 | 39 |
organ system cancer | 4.66e-10 | 137 |
chronic myeloid leukemia | 1.20e-07 | 1 |
chronic leukemia | 2.05e-07 | 8 |
syndrome | 5.50e-07 | 1 |
acute leukemia | 6.57e-07 | 1 |