FFCP PHASE1:Hg19::chr19:36593849..36593866,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36593849..36593866,+ to FFCP PHASE1:Hg19::chr19:36593849..36593866,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36593849..36593866,+ | |||
|description=CAGE_peak_at_chr19:36593849..36593866,+ | |||
|id=chr19:36593849..36593866,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.04e-10!3;CL:0002577!1.04e-10!3;CL:0002541!1.35e-09!3;CL:0000764!4.38e-07!2;CL:0000765!4.38e-07!2;CL:0000050!4.38e-07!2;CL:0000038!4.38e-07!2;CL:0000558!4.38e-07!2;CL:0000547!4.38e-07!2;CL:0000549!4.38e-07!2;CL:0000550!4.38e-07!2;CL:0000552!4.38e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.29e-74;3!CL:0000349;1.70e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.81e-75,3;CL:0000349,1.57e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.62e-26;1!UBERON:0005425;7.62e-26;1!UBERON:0003056;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.27e-16!14;UBERON:0000158!1.27e-16!14;UBERON:0003124!8.39e-16!7;UBERON:0000476!1.35e-09!3;UBERON:0000920!1.35e-09!3;UBERON:0000478!6.54e-09!24;UBERON:0001987!4.16e-08!4;UBERON:0004340!4.16e-08!4;UBERON:0004923!4.12e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.14e-56;4!UBERON:0002079;7.62e-26;1!UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0000341;1.21e-13;2!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0002081;1.21e-13;2!UBERON:0000478;4.92e-10;24!UBERON:0004151;1.53e-09;3!UBERON:0000077;5.43e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.15e-56,4;UBERON:0004340,2.15e-56,4;UBERON:0003124,1.21e-32,7;UBERON:0002079,5.93e-26,1;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0005631,9.68e-17,14;UBERON:0000158,9.68e-17,14;UBERON:0002081,1.07e-13,2;UBERON:0010227,1.07e-13,2;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0000341,1.37e-13,2;UBERON:0000995,2.11e-11,21;UBERON:0005795,6.47e-11,22;UBERON:0003975,6.47e-11,22;UBERON:0000478,4.63e-10,24;UBERON:0004175,1.10e-09,25;UBERON:0004151,1.41e-09,3;UBERON:0006554,6.76e-09,47;UBERON:0003133,9.00e-09,48;UBERON:0001008,1.02e-08,48;UBERON:0000077,1.95e-08,29;UBERON:0001781,1.80e-07,4;UBERON:0005156,3.33e-07,59;UBERON:0000990,3.33e-07,59;UBERON:0003134,9.68e-07,37;UBERON:0000474,9.68e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,6.65741758041988,1.5119514666484,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92561538418556,0.535928260312357,0,0,1.0661699095049,0,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,6.65741758041988,1.5119514666484,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92561538418556,0.535928260312357,0,0,1.0661699095049,0,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:36593849..36593866,+ | |||
}} | }} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36593849..36593866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36593849..36593866, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.81e-75 | 3 |
extraembryonic cell | 1.57e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.15e-56 | 4 |
allantois | 2.15e-56 | 4 |
chorion | 1.21e-32 | 7 |
left cardiac atrium | 5.93e-26 | 1 |
cranial nerve II | 7.62e-26 | 1 |
cranial nerve | 7.62e-26 | 1 |
nerve trunk | 7.62e-26 | 1 |
nerve connecting eye with brain | 7.62e-26 | 1 |
nerve | 7.62e-26 | 1 |
retinal neural layer | 7.62e-26 | 1 |
presumptive neural retina | 7.62e-26 | 1 |
extraembryonic membrane | 9.68e-17 | 14 |
membranous layer | 9.68e-17 | 14 |
cardiac atrium | 1.07e-13 | 2 |
future cardiac atrium | 1.07e-13 | 2 |
neural tissue | 1.21e-13 | 2 |
multi cell component structure | 1.21e-13 | 2 |
neuron projection bundle | 1.21e-13 | 2 |
throat | 1.37e-13 | 2 |
uterus | 2.11e-11 | 21 |
embryonic uterus | 6.47e-11 | 22 |
internal female genitalia | 6.47e-11 | 22 |
extraembryonic structure | 4.63e-10 | 24 |
internal genitalia | 1.10e-09 | 25 |
cardiac chamber | 1.41e-09 | 3 |
urinary system structure | 6.76e-09 | 47 |
reproductive organ | 9.00e-09 | 48 |
renal system | 1.02e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 1.95e-08 | 29 |
layer of retina | 1.80e-07 | 4 |
reproductive structure | 3.33e-07 | 59 |
reproductive system | 3.33e-07 | 59 |
female reproductive organ | 9.68e-07 | 37 |
female reproductive system | 9.68e-07 | 37 |