FFCP PHASE1:Hg19::chr19:50992386..50992430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50992386..50992430,- to FFCP PHASE1:Hg19::chr19:50992386..50992430,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:50992386..50992430,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr19:50992386..50992430,- | |||
|id=chr19:50992386..50992430,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.21e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.50e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.94e-07;3!UBERON:0003057;7.94e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-35!115;UBERON:0001049!9.12e-21!57;UBERON:0005068!9.12e-21!57;UBERON:0006241!9.12e-21!57;UBERON:0007135!9.12e-21!57;UBERON:0005743!1.58e-18!86;UBERON:0001017!2.96e-18!82;UBERON:0000073!8.24e-18!94;UBERON:0001016!8.24e-18!94;UBERON:0002780!4.40e-17!41;UBERON:0001890!4.40e-17!41;UBERON:0006240!4.40e-17!41;UBERON:0003080!1.97e-16!42;UBERON:0002616!1.27e-15!59;UBERON:0000955!2.05e-15!69;UBERON:0006238!2.05e-15!69;UBERON:0002346!1.08e-14!90;UBERON:0002020!1.58e-14!34;UBERON:0003528!1.58e-14!34;UBERON:0001893!2.11e-14!34;UBERON:0003075!2.93e-14!86;UBERON:0007284!2.93e-14!86;UBERON:0002791!9.55e-14!33;UBERON:0001869!1.19e-12!32;UBERON:0003056!1.56e-11!61;UBERON:0000153!4.07e-10!129;UBERON:0007811!4.07e-10!129;UBERON:0000924!1.53e-09!173;UBERON:0006601!1.53e-09!173;UBERON:0002619!2.12e-09!22;UBERON:0001950!2.65e-09!20;UBERON:0004121!4.04e-09!169;UBERON:0000956!1.17e-08!25;UBERON:0000203!1.17e-08!25;UBERON:0000033!1.75e-08!123;UBERON:0002308!4.48e-08!9;UBERON:0000125!4.48e-08!9;UBERON:0002420!8.23e-08!9;UBERON:0007245!8.23e-08!9;UBERON:0010009!8.23e-08!9;UBERON:0010011!8.23e-08!9;UBERON:0000454!8.23e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.03e-22;16!UBERON:0002036;7.03e-22;16!UBERON:0005090;6.21e-11;2!UBERON:0001630;6.21e-11;2!UBERON:0002385;1.91e-10;31!UBERON:0001015;1.91e-10;31!UBERON:0000383;1.91e-10;31!UBERON:0000341;2.92e-10;2!UBERON:0001875;4.52e-10;2!UBERON:0006514;4.52e-10;2!UBERON:0005162;5.06e-10;2!UBERON:0000122;5.06e-10;2!UBERON:0002771;1.49e-09;2!UBERON:0002780;1.29e-07;41!UBERON:0001890;1.29e-07;41!UBERON:0001723;1.87e-07;3!UBERON:0001033;1.87e-07;3!UBERON:0003978;5.15e-07;3!UBERON:0000946;5.15e-07;3!UBERON:0002240;7.94e-07;3!UBERON:0005174;7.94e-07;3!UBERON:0001137;7.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.91e-15,114;UBERON:0005090,6.22e-11,2;UBERON:0001630,6.22e-11,2;UBERON:0000341,2.55e-10,2;UBERON:0002780,2.75e-10,41;UBERON:0001890,2.75e-10,41;UBERON:0003080,2.75e-10,41;UBERON:0006240,2.75e-10,41;UBERON:0001875,4.04e-10,2;UBERON:0006514,4.04e-10,2;UBERON:0001049,4.50e-10,56;UBERON:0005068,4.50e-10,56;UBERON:0006241,4.50e-10,56;UBERON:0007135,4.50e-10,56;UBERON:0005162,5.81e-10,2;UBERON:0000122,5.81e-10,2;UBERON:0003075,7.04e-10,82;UBERON:0007284,7.04e-10,82;UBERON:0010314,7.22e-10,132;UBERON:0002771,1.94e-09,2;UBERON:0002346,2.87e-09,86;UBERON:0001016,1.62e-08,89;UBERON:0001017,2.03e-08,81;UBERON:0010371,3.14e-08,104;UBERON:0000955,1.08e-07,68;UBERON:0006238,1.08e-07,68;UBERON:0003056,1.14e-07,61;UBERON:0000073,1.51e-07,53;UBERON:0002616,1.51e-07,53;UBERON:0001723,1.88e-07,3;UBERON:0001033,1.88e-07,3;UBERON:0010056,1.88e-07,3;UBERON:0003978,5.82e-07,3;UBERON:0009751,5.82e-07,3;UBERON:0000946,5.82e-07,3;UBERON:0002523,5.82e-07,3;UBERON:0005983,5.82e-07,3;UBERON:0002165,5.82e-07,3;UBERON:0002062,5.82e-07,3;UBERON:0007280,5.82e-07,3;UBERON:0001893,8.80e-07,34;UBERON:0002240,8.82e-07,3;UBERON:0005174,8.82e-07,3;UBERON:0001137,8.82e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,1.37257369524342,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,2.41676795730305,0.616194468458578,1.84204409671355,3.72158745708233,0,0.725083469571143,1.87498580315422,5.78708231703793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,3.37964840739304,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,1.99613798001194,0,0.0874599999961957,0,0.455173793141999,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.60298219312704,0,0.331737779793674,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,1.21322039365219,69.8242553149946,0.937057782901357,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.90392296312213,0,0,0.443175571691151,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,6.60462317580768,1.50595916781192,0,0,0,2.51354161145029,2.29160424011684,0,0.998395002494955,0.429226048136571,0,6.78553072115935,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.92562821219883,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,1.09823638411767,0.3755727921195,0,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0.850299680406731,0.247871528518004,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0.163771917510097,0,0.337687923091973,2.34323429584154,0.413373593002368,0.126831620387814,0,0,8.9318012110073,0,0,0,1.00885116665647,1.21393120847326,0.227662191351298,0,0,0,0.203909198930495,0.460409414939944,0.118193840883968,0,0,0.785577949580009,0,0.913158720509496,0,0.47775168788705,0.285906176706625,0.47404083519818,0.116241425368125,1.56472445072321,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,101.646327438499,2.87455859197492,3.4794432940146,2.91426595835484,0,0.994753875806841,0,0,0.329821550236287,0,0,0.218559560503957,0,0.490296643507811,0,2.55201007249429,1.18818560130834,0.8453114551668,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,2.29343333042322,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0,1.24119595034274,3.62497769231668,2.61870874610114,0.0645889098360061,0.124149428591716,0,0.445530107947154,7.88257036937055,7.18465268059972,14.7160319466671,0.202056159043763,0.143444410785353,12.6410935487485,0,0.106727345877715,0,0.179650404213174,7.03922827210363,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,1.37257369524342,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,2.41676795730305,0.616194468458578,1.84204409671355,3.72158745708233,0,0.725083469571143,1.87498580315422,5.78708231703793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,3.37964840739304,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,1.99613798001194,0,0.0874599999961957,0,0.455173793141999,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.60298219312704,0,0.331737779793674,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,1.21322039365219,69.8242553149946,0.937057782901357,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.90392296312213,0,0,0.443175571691151,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,6.60462317580768,1.50595916781192,0,0,0,2.51354161145029,2.29160424011684,0,0.998395002494955,0.429226048136571,0,6.78553072115935,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.92562821219883,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,1.09823638411767,0.3755727921195,0,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0.850299680406731,0.247871528518004,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0.163771917510097,0,0.337687923091973,2.34323429584154,0.413373593002368,0.126831620387814,0,0,8.9318012110073,0,0,0,1.00885116665647,1.21393120847326,0.227662191351298,0,0,0,0.203909198930495,0.460409414939944,0.118193840883968,0,0,0.785577949580009,0,0.913158720509496,0,0.47775168788705,0.285906176706625,0.47404083519818,0.116241425368125,1.56472445072321,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,101.646327438499,2.87455859197492,3.4794432940146,2.91426595835484,0,0.994753875806841,0,0,0.329821550236287,0,0,0.218559560503957,0,0.490296643507811,0,2.55201007249429,1.18818560130834,0.8453114551668,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,2.29343333042322,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0,1.24119595034274,3.62497769231668,2.61870874610114,0.0645889098360061,0.124149428591716,0,0.445530107947154,7.88257036937055,7.18465268059972,14.7160319466671,0.202056159043763,0.143444410785353,12.6410935487485,0,0.106727345877715,0,0.179650404213174,7.03922827210363,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p@chr19:50992386..50992430,- | |||
}} | }} |
Latest revision as of 16:24, 27 July 2015
Short description: | p@chr19:50992386..50992430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50992386..50992430, - |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.50e-12 | 9 |