FFCP PHASE1:Hg19::chr1:22211913..22211920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22211913..22211920,+ | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22211913..22211920,+ | |description=CAGE_peak_at_chr1:22211913..22211920,+ | ||
|id=chr1:22211913..22211920,+ | |id=chr1:22211913..22211920,+ | ||
|ontology_enrichment_celltype=CL:0002078!6.67e-22!44;CL:0002139!6.57e-21!24;CL:0000115!1.16e-20!35;CL:0000222!6.15e-20!119;CL:0000213!8.24e-18!57;CL:0000215!8.24e-18!57;CL:0000071!1.29e-15!18;CL:0002546!1.29e-15!18;CL:0000220!9.62e-09!246;CL:0002321!1.78e-08!248;CL:0000076!4.06e-08!62;CL:1000413!1.71e-07!9;CL:0002543!5.05e-07!6;CL:0005020!7.32e-07!6;CL:0002138!7.32e-07!6;CL:0005022!7.32e-07!6 | |ontology_enrichment_celltype=CL:0002078!6.67e-22!44;CL:0002139!6.57e-21!24;CL:0000115!1.16e-20!35;CL:0000222!6.15e-20!119;CL:0000213!8.24e-18!57;CL:0000215!8.24e-18!57;CL:0000071!1.29e-15!18;CL:0002546!1.29e-15!18;CL:0000220!9.62e-09!246;CL:0002321!1.78e-08!248;CL:0000076!4.06e-08!62;CL:1000413!1.71e-07!9;CL:0002543!5.05e-07!6;CL:0005020!7.32e-07!6;CL:0002138!7.32e-07!6;CL:0005022!7.32e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.21e-46;24!CL:0000115;1.30e-45;36!CL:0000071;2.01e-33;18!CL:0002078;8.03e-26;45!CL:1000413;4.05e-21;9!CL:1000746;4.45e-19;7!CL:1000612;4.45e-19;7!CL:0000213;1.60e-18;58!CL:0000215;1.60e-18;58!CL:0002188;9.22e-18;5!CL:0002544;1.58e-14;6!CL:0002138;7.65e-14;6!CL:0002545;6.05e-12;2!CL:0002681;5.03e-11;12!CL:0002584;5.03e-11;12!CL:1000449;9.21e-09;15!CL:0002543;2.50e-08;6!CL:0002144;7.12e-08;3!CL:1000497;1.07e-07;17!CL:0002518;1.07e-07;17!CL:0002618;1.23e-07;3!CL:0000076;5.39e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.61e-54,36;CL:0002139,7.81e-46,24;CL:0002078,1.54e-42,45;CL:0000213,1.91e-35,58;CL:0000215,1.91e-35,58;CL:0000071,1.24e-33,18;CL:0002546,1.24e-33,18;CL:1000413,2.68e-21,9;CL:0000222,1.34e-19,121;CL:1000746,5.39e-19,7;CL:1000612,5.39e-19,7;CL:0002188,7.65e-18,5;CL:0002544,1.05e-14,6;CL:0005020,1.07e-13,6;CL:0002138,1.07e-13,6;CL:0005022,1.07e-13,6;CL:0002545,4.63e-12,2;CL:0002681,5.60e-11,12;CL:0002584,5.60e-11,12;CL:0000076,1.13e-09,63;CL:1000449,1.00e-08,15;CL:0002543,2.60e-08,6;CL:0002144,6.00e-08,3;CL:1000497,1.16e-07,17;CL:0002518,1.16e-07,17;CL:0002618,1.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.01e-33;18!CL:0005022;7.65e-14;6!CL:0000222;4.88e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.05e-24!69;UBERON:0004872!7.99e-22!84;UBERON:0003914!8.36e-22!118;UBERON:0002049!1.44e-21!79;UBERON:0007798!1.44e-21!79;UBERON:0001981!5.19e-20!60;UBERON:0007500!5.19e-20!60;UBERON:0004537!5.19e-20!60;UBERON:0006965!5.19e-20!60;UBERON:0001009!2.40e-17!113;UBERON:0004535!7.89e-17!110;UBERON:0001986!1.29e-15!18;UBERON:0004638!1.29e-15!18;UBERON:0004852!1.29e-15!18;UBERON:0006914!3.79e-15!25;UBERON:0000487!1.01e-14!22;UBERON:0000490!2.85e-12!138;UBERON:0001637!4.61e-12!42;UBERON:0003509!4.61e-12!42;UBERON:0004572!4.61e-12!42;UBERON:0004111!8.20e-11!241;UBERON:0005256!1.04e-10!143;UBERON:0000477!1.18e-10!286;UBERON:0004573!3.89e-10!33;UBERON:0004571!3.89e-10!33;UBERON:0002100!9.04e-10!216;UBERON:0000947!1.30e-08!21;UBERON:0010191!1.30e-08!21;UBERON:0000926!1.56e-08!448;UBERON:0004120!1.56e-08!448;UBERON:0006603!1.56e-08!448;UBERON:0000468!1.64e-08!659;UBERON:0000119!2.57e-08!312;UBERON:0000483!4.16e-08!309;UBERON:0002417!8.39e-08!61;UBERON:0000916!8.39e-08!61;UBERON:0003064!1.67e-07!37;UBERON:0003915!1.71e-07!9;UBERON:0004700!1.71e-07!9;UBERON:0001917!1.71e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.01e-33;18!UBERON:0001986;2.01e-33;18!UBERON:0004852;2.01e-33;18!UBERON:0000487;5.13e-32;22!UBERON:0006914;7.05e-28;25!UBERON:0003915;4.05e-21;9!UBERON:0004700;4.05e-21;9!UBERON:0001917;4.05e-21;9!UBERON:0000074;4.45e-19;7!UBERON:0001229;4.45e-19;7!UBERON:0000490;5.83e-19;33!UBERON:0001473;9.32e-16;8!UBERON:0004536;9.32e-16;8!UBERON:0006558;9.32e-16;8!UBERON:0000055;6.35e-14;65!UBERON:0002465;1.45e-12;10!UBERON:0000353;2.29e-12;15!UBERON:0005800;6.05e-12;2!UBERON:0001515;6.05e-12;2!UBERON:0001225;5.03e-11;12!UBERON:0008987;5.03e-11;12!UBERON:0003914;1.48e-10;74!UBERON:0002049;4.57e-10;75!UBERON:0007798;4.57e-10;75!UBERON:0001851;9.21e-09;15!UBERON:0006555;9.21e-09;15!UBERON:0004819;9.21e-09;15!UBERON:0001285;9.21e-09;15!UBERON:0007684;9.21e-09;15!UBERON:0007500;1.51e-08;56!UBERON:0001981;1.51e-08;56!UBERON:0004537;1.51e-08;56!UBERON:0010523;7.12e-08;3!UBERON:0001915;7.12e-08;3!UBERON:0001982;7.12e-08;3!UBERON:0000025;1.76e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.24e-33,18;UBERON:0001986,1.24e-33,18;UBERON:0004852,1.24e-33,18;UBERON:0000487,2.88e-32,22;UBERON:0006914,4.25e-28,25;UBERON:0000055,2.65e-23,68;UBERON:0003915,2.68e-21,9;UBERON:0004700,2.68e-21,9;UBERON:0001917,2.68e-21,9;UBERON:0002049,9.06e-20,78;UBERON:0007798,9.06e-20,78;UBERON:0010532,5.39e-19,7;UBERON:0000074,5.39e-19,7;UBERON:0001229,5.39e-19,7;UBERON:0001230,5.39e-19,7;UBERON:0003220,5.39e-19,7;UBERON:0005749,5.39e-19,7;UBERON:0004199,5.39e-19,7;UBERON:0004209,5.39e-19,7;UBERON:0004198,5.39e-19,7;UBERON:0004876,6.83e-17,11;UBERON:0003914,9.17e-17,117;UBERON:0005103,1.36e-16,8;UBERON:0000083,1.36e-16,8;UBERON:0009201,1.36e-16,8;UBERON:0006553,1.36e-16,8;UBERON:0003074,1.36e-16,8;UBERON:0003060,1.36e-16,8;UBERON:0001473,1.22e-15,8;UBERON:0004536,1.22e-15,8;UBERON:0006558,1.22e-15,8;UBERON:0000080,1.01e-14,9;UBERON:0002120,1.01e-14,9;UBERON:0004875,1.01e-14,9;UBERON:0005721,1.01e-14,9;UBERON:0005754,1.01e-14,9;UBERON:0007297,1.01e-14,9;UBERON:0004535,1.55e-14,109;UBERON:0007500,1.87e-14,59;UBERON:0001981,1.87e-14,59;UBERON:0004537,1.87e-14,59;UBERON:0006965,1.87e-14,59;UBERON:0001009,4.98e-14,112;UBERON:0000058,7.24e-13,19;UBERON:0004872,1.34e-12,83;UBERON:0002465,1.79e-12,10;UBERON:0000353,2.42e-12,15;UBERON:0005800,4.63e-12,2;UBERON:0001515,4.63e-12,2;UBERON:0001225,5.60e-11,12;UBERON:0008987,5.60e-11,12;UBERON:0003887,5.60e-11,12;UBERON:0004111,6.15e-11,240;UBERON:0001851,1.00e-08,15;UBERON:0004211,1.00e-08,15;UBERON:0009773,1.00e-08,15;UBERON:0001231,1.00e-08,15;UBERON:0001285,1.00e-08,15;UBERON:0007684,1.00e-08,15;UBERON:0004208,1.00e-08,15;UBERON:0000490,1.65e-08,148;UBERON:0000025,2.86e-08,192;UBERON:0006555,3.67e-08,16;UBERON:0004819,3.67e-08,16;UBERON:0010523,6.00e-08,3;UBERON:0001915,6.00e-08,3;UBERON:0001982,6.00e-08,3;UBERON:0003081,1.47e-07,203;UBERON:0001637,7.41e-07,42;UBERON:0003509,7.41e-07,42;UBERON:0004572,7.41e-07,42 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,1.0007329835313,0.893922188854576,0,2.53299878168311,0.631719873426831,0,0.245733936501509,2.79120467188971,0.873765488520689,0.527533956456907,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,1.44575660953827,0,0.579386075843295,0,0.973269740605272,0.0945348171640679,0,0,0,0.728590576585084,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,1.72046919021225,3.81854551768354,0,7.1314904155684,2.75118041940067,0.626984899610432,0.516833518338658,0.71153252537342,2.00832367658802,2.01414658554573,0.760272105718513,1.95249646038536,2.94130464276695,4.86085168729056,0.803697554556718,1.57170560838319,1.12611480483322,3.06633274931766,0.949265659568129,0.732806975721629,0,0,0,1.49091585508596,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,1.43723628363248,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,1.8034837803194,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,1.06502877754984,0.201504196455281,0.508681776931463,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,1.29929802984966,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,7.15312891703765,0,0,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0.234282829985426,0,0,0,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.841980283299221,0.768834895534206,0.511707249066704,0.482561763430822,0,0,0,0,0,0.464841513839837,0,0,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,5.68666920354483,2.89159298970077,0.215915916102139,4.62681758070868,0,1.00337954770971,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.356128142586949,0,0.192190067365106,0.255225424989168,0,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0,0.74129687641568,0,0,0.316379424718726,0.38126038784765,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.565621727814851,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0,0.392996164052485,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.489698424477443,0,0,1.99052386215701,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.268733889946905,1.08089965062721,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0.450772826991655,0.380805212168795,0,0.181848659202559,0,0,1.99047944349308,0,0.343395705182793,0,0,0.192619830407303,0.643324774124777,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0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| ||
|short_description=p@chr1:22211913..22211920,+ | |short_description=p@chr1:22211913..22211920,+ | ||
}} | }} |
Latest revision as of 04:12, 28 July 2015
Short description: | p@chr1:22211913..22211920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22211913..22211920, + |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.61e-54 | 36 |
endothelial cell of vascular tree | 7.81e-46 | 24 |
meso-epithelial cell | 1.54e-42 | 45 |
lining cell | 1.91e-35 | 58 |
barrier cell | 1.91e-35 | 58 |
blood vessel endothelial cell | 1.24e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.24e-33 | 18 |
endothelial cell of artery | 2.68e-21 | 9 |
mesodermal cell | 1.34e-19 | 121 |
glomerular cell | 5.39e-19 | 7 |
kidney corpuscule cell | 5.39e-19 | 7 |
glomerular endothelial cell | 7.65e-18 | 5 |
aortic endothelial cell | 1.05e-14 | 6 |
lymphangioblast | 1.07e-13 | 6 |
endothelial cell of lymphatic vessel | 1.07e-13 | 6 |
vascular lymphangioblast | 1.07e-13 | 6 |
thoracic aorta endothelial cell | 4.63e-12 | 2 |
kidney cortical cell | 5.60e-11 | 12 |
renal cortical epithelial cell | 5.60e-11 | 12 |
squamous epithelial cell | 1.13e-09 | 63 |
epithelial cell of nephron | 1.00e-08 | 15 |
vein endothelial cell | 2.60e-08 | 6 |
capillary endothelial cell | 6.00e-08 | 3 |
kidney cell | 1.16e-07 | 17 |
kidney epithelial cell | 1.16e-07 | 17 |
endothelial cell of umbilical vein | 1.28e-07 | 3 |