FFCP PHASE1:Hg19::chr20:9496091..9496106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:9496091..9496106,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr20:9496091..9496106,+ | |description=CAGE_peak_at_chr20:9496091..9496106,+ | ||
|id=chr20:9496091..9496106,+ | |id=chr20:9496091..9496106,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.86e-79;2!UBERON:0006222;2.70e-40;1!UBERON:0006601;8.61e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.34e-67!32;UBERON:0001049!5.16e-65!57;UBERON:0005068!5.16e-65!57;UBERON:0006241!5.16e-65!57;UBERON:0007135!5.16e-65!57;UBERON:0001893!1.93e-63!34;UBERON:0002020!2.47e-63!34;UBERON:0003528!2.47e-63!34;UBERON:0002780!1.50e-62!41;UBERON:0001890!1.50e-62!41;UBERON:0006240!1.50e-62!41;UBERON:0003080!5.76e-61!42;UBERON:0002791!1.76e-59!33;UBERON:0002616!3.36e-58!59;UBERON:0001017!6.25e-53!82;UBERON:0000955!4.85e-52!69;UBERON:0006238!4.85e-52!69;UBERON:0002619!9.00e-51!22;UBERON:0003075!1.15e-50!86;UBERON:0007284!1.15e-50!86;UBERON:0005743!3.27e-50!86;UBERON:0001950!7.07e-49!20;UBERON:0002346!3.89e-48!90;UBERON:0000073!6.48e-45!94;UBERON:0001016!6.48e-45!94;UBERON:0000956!1.72e-44!25;UBERON:0000203!1.72e-44!25;UBERON:0003056!4.34e-44!61;UBERON:0007023!2.36e-39!115;UBERON:0000153!2.24e-31!129;UBERON:0007811!2.24e-31!129;UBERON:0000033!5.44e-31!123;UBERON:0000200!8.14e-29!6;UBERON:0002420!2.04e-27!9;UBERON:0007245!2.04e-27!9;UBERON:0010009!2.04e-27!9;UBERON:0010011!2.04e-27!9;UBERON:0000454!2.04e-27!9;UBERON:0004121!5.82e-24!169;UBERON:0000924!2.96e-23!173;UBERON:0006601!2.96e-23!173;UBERON:0001871!9.58e-22!7;UBERON:0000369!2.89e-21!4;UBERON:0002435!2.89e-21!4;UBERON:0000204!2.89e-21!4;UBERON:0010082!2.89e-21!4;UBERON:0002308!5.22e-20!9;UBERON:0000125!5.22e-20!9;UBERON:0009663!1.64e-18!7;UBERON:0000349!1.00e-16!5;UBERON:0005383!2.09e-16!3;UBERON:0005382!2.09e-16!3;UBERON:0002771!3.52e-15!3;UBERON:0000025!8.80e-15!194;UBERON:0004111!1.17e-11!241;UBERON:0001873!1.64e-11!2;UBERON:0010122!1.64e-11!2;UBERON:0000477!1.84e-11!286;UBERON:0001876!2.86e-11!2;UBERON:0000064!3.77e-11!219;UBERON:0001870!8.12e-11!2;UBERON:0000483!4.41e-10!309;UBERON:0002360!5.04e-10!2;UBERON:0000094!5.04e-10!2;UBERON:0007645!5.04e-10!2;UBERON:0000119!6.43e-10!312;UBERON:0002298!1.04e-09!8;UBERON:0001872!2.59e-09!5;UBERON:0002021!3.44e-09!5;UBERON:0003076!1.00e-07!15;UBERON:0003057!1.00e-07!15;UBERON:0000475!1.82e-07!365;UBERON:0000988!1.93e-07!3;UBERON:0001896!4.01e-07!3;UBERON:0005290!4.01e-07!3;UBERON:0010096!4.01e-07!3 | |ontology_enrichment_uberon=UBERON:0001869!1.34e-67!32;UBERON:0001049!5.16e-65!57;UBERON:0005068!5.16e-65!57;UBERON:0006241!5.16e-65!57;UBERON:0007135!5.16e-65!57;UBERON:0001893!1.93e-63!34;UBERON:0002020!2.47e-63!34;UBERON:0003528!2.47e-63!34;UBERON:0002780!1.50e-62!41;UBERON:0001890!1.50e-62!41;UBERON:0006240!1.50e-62!41;UBERON:0003080!5.76e-61!42;UBERON:0002791!1.76e-59!33;UBERON:0002616!3.36e-58!59;UBERON:0001017!6.25e-53!82;UBERON:0000955!4.85e-52!69;UBERON:0006238!4.85e-52!69;UBERON:0002619!9.00e-51!22;UBERON:0003075!1.15e-50!86;UBERON:0007284!1.15e-50!86;UBERON:0005743!3.27e-50!86;UBERON:0001950!7.07e-49!20;UBERON:0002346!3.89e-48!90;UBERON:0000073!6.48e-45!94;UBERON:0001016!6.48e-45!94;UBERON:0000956!1.72e-44!25;UBERON:0000203!1.72e-44!25;UBERON:0003056!4.34e-44!61;UBERON:0007023!2.36e-39!115;UBERON:0000153!2.24e-31!129;UBERON:0007811!2.24e-31!129;UBERON:0000033!5.44e-31!123;UBERON:0000200!8.14e-29!6;UBERON:0002420!2.04e-27!9;UBERON:0007245!2.04e-27!9;UBERON:0010009!2.04e-27!9;UBERON:0010011!2.04e-27!9;UBERON:0000454!2.04e-27!9;UBERON:0004121!5.82e-24!169;UBERON:0000924!2.96e-23!173;UBERON:0006601!2.96e-23!173;UBERON:0001871!9.58e-22!7;UBERON:0000369!2.89e-21!4;UBERON:0002435!2.89e-21!4;UBERON:0000204!2.89e-21!4;UBERON:0010082!2.89e-21!4;UBERON:0002308!5.22e-20!9;UBERON:0000125!5.22e-20!9;UBERON:0009663!1.64e-18!7;UBERON:0000349!1.00e-16!5;UBERON:0005383!2.09e-16!3;UBERON:0005382!2.09e-16!3;UBERON:0002771!3.52e-15!3;UBERON:0000025!8.80e-15!194;UBERON:0004111!1.17e-11!241;UBERON:0001873!1.64e-11!2;UBERON:0010122!1.64e-11!2;UBERON:0000477!1.84e-11!286;UBERON:0001876!2.86e-11!2;UBERON:0000064!3.77e-11!219;UBERON:0001870!8.12e-11!2;UBERON:0000483!4.41e-10!309;UBERON:0002360!5.04e-10!2;UBERON:0000094!5.04e-10!2;UBERON:0007645!5.04e-10!2;UBERON:0000119!6.43e-10!312;UBERON:0002298!1.04e-09!8;UBERON:0001872!2.59e-09!5;UBERON:0002021!3.44e-09!5;UBERON:0003076!1.00e-07!15;UBERON:0003057!1.00e-07!15;UBERON:0000475!1.82e-07!365;UBERON:0000988!1.93e-07!3;UBERON:0001896!4.01e-07!3;UBERON:0005290!4.01e-07!3;UBERON:0010096!4.01e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;8.21e-157;4!UBERON:0002435;8.21e-157;4!UBERON:0000204;8.21e-157;4!UBERON:0005383;4.26e-118;3!UBERON:0005382;4.26e-118;3!UBERON:0009663;3.95e-90;7!UBERON:0001873;2.86e-79;2!UBERON:0002420;2.36e-70;9!UBERON:0000125;2.36e-70;9!UBERON:0007245;2.36e-70;9!UBERON:0002308;2.36e-70;9!UBERON:0010009;2.36e-70;9!UBERON:0010011;2.36e-70;9!UBERON:0000454;2.36e-70;9!UBERON:0001874;9.91e-41;1!UBERON:0001882;1.48e-40;1!UBERON:0005403;1.48e-40;1!UBERON:0002791;7.31e-21;32!UBERON:0001869;4.75e-19;32!UBERON:0003528;4.77e-19;34!UBERON:0002020;4.77e-19;34!UBERON:0002780;1.18e-18;41!UBERON:0001890;1.18e-18;41!UBERON:0001893;3.83e-18;34!UBERON:0000073;3.21e-13;53!UBERON:0002616;3.21e-13;53!UBERON:0000955;1.09e-11;68!UBERON:0001017;5.10e-10;75!UBERON:0000349;2.97e-09;5!UBERON:0007023;6.02e-07;114!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.72e-157,4;UBERON:0002435,6.72e-157,4;UBERON:0000204,6.72e-157,4;UBERON:0010082,6.72e-157,4;UBERON:0005383,3.48e-118,3;UBERON:0005382,3.48e-118,3;UBERON:0009663,3.52e-90,7;UBERON:0001873,2.34e-79,2;UBERON:0010122,2.34e-79,2;UBERON:0002420,2.16e-70,9;UBERON:0000125,2.16e-70,9;UBERON:0007245,2.16e-70,9;UBERON:0002308,2.16e-70,9;UBERON:0010009,2.16e-70,9;UBERON:0010011,2.16e-70,9;UBERON:0000454,2.16e-70,9;UBERON:0001874,9.91e-41,1;UBERON:0001882,1.48e-40,1;UBERON:0005403,1.48e-40,1;UBERON:0002780,4.07e-24,41;UBERON:0001890,4.07e-24,41;UBERON:0003080,4.07e-24,41;UBERON:0006240,4.07e-24,41;UBERON:0002791,7.06e-20,32;UBERON:0001869,7.06e-20,32;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0003528,8.68e-19,34;UBERON:0002020,8.68e-19,34;UBERON:0001893,8.68e-19,34;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0003056,1.38e-16,61;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0000349,2.97e-09,5;UBERON:0010314,4.60e-08,132;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0.403599414382095,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,1.77148277162768,13.6273975646711,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89031512934068,0,0.159633859057151,0.41023272848151,0,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.679697329768317,0.328863867814245,0,0,0,9.42693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0.403599414382095,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,1.77148277162768,13.6273975646711,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89031512934068,0,0.159633859057151,0.41023272848151,0,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.679697329768317,0.328863867814245,0,0,0,9.42693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:9496091..9496106,+ | |short_description=p@chr20:9496091..9496106,+ | ||
}} | }} |
Latest revision as of 16:40, 28 July 2015
Short description: | p@chr20:9496091..9496106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:9496091..9496106, + |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data