FFCP PHASE1:Hg19::chr21:32554871..32554883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:32554871..32554883,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr21:32554871..32554883,- | |||
|id=chr21:32554871..32554883,- | |||
|ontology_enrichment_celltype=CL:0000084!3.62e-21!25;CL:0000827!3.62e-21!25;CL:0000791!3.55e-19!18;CL:0000789!3.55e-19!18;CL:0002420!3.55e-19!18;CL:0002419!3.55e-19!18;CL:0000790!3.55e-19!18;CL:0000624!6.72e-17!6;CL:0000080!2.25e-16!6;CL:0000838!8.57e-11!52;CL:0000542!1.65e-10!53;CL:0000051!1.65e-10!53;CL:0000898!3.75e-09!3;CL:0000842!3.24e-08!3;CL:0002087!5.41e-08!119;CL:0000738!5.87e-08!140;CL:0000625!6.68e-08!11;CL:0000815!6.87e-07!2;CL:0000792!6.87e-07!2;CL:0002677!6.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.57e-43;6!CL:0000084;7.93e-26;25!CL:0000815;5.69e-22;2!CL:0000792;5.69e-22;2!CL:0002677;5.69e-22;2!CL:0000791;2.21e-20;18!CL:0000789;2.21e-20;18!CL:0002419;2.21e-20;18!CL:0000898;5.48e-15;3!CL:0000542;6.10e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.43e-43,6;CL:0000084,1.07e-25,25;CL:0000827,1.07e-25,25;CL:0000815,9.19e-22,2;CL:0000792,9.19e-22,2;CL:0002677,9.19e-22,2;CL:0000791,3.07e-20,18;CL:0000789,3.07e-20,18;CL:0002420,3.07e-20,18;CL:0002419,3.07e-20,18;CL:0000790,3.07e-20,18;CL:0000898,7.53e-15,3;CL:0000838,6.60e-12,52;CL:0000542,1.15e-11,53;CL:0000051,1.15e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.21e-20;18!UBERON:0001045;1.07e-11;1!CL:0000051;6.10e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.78e-12;1!DOID:0060061;4.78e-12;1!DOID:8691;4.78e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.53e-12,1;DOID:0060061,4.53e-12,1;DOID:8691,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.21e-16!15;UBERON:0000179!2.21e-16!15;UBERON:0000463!2.21e-16!15;UBERON:0000369!2.73e-11!4;UBERON:0002435!2.73e-11!4;UBERON:0000204!2.73e-11!4;UBERON:0010082!2.73e-11!4;UBERON:0009663!2.38e-09!7;UBERON:0005383!3.65e-09!3;UBERON:0005382!3.65e-09!3;UBERON:0004177!4.46e-09!7;UBERON:0002308!3.51e-07!9;UBERON:0002420!3.51e-07!9;UBERON:0000125!3.51e-07!9;UBERON:0007245!3.51e-07!9;UBERON:0010009!3.51e-07!9;UBERON:0010011!3.51e-07!9;UBERON:0000454!3.51e-07!9;UBERON:0002193!4.48e-07!112;UBERON:0002370!7.46e-07!4;UBERON:0005058!7.46e-07!4;UBERON:0009113!7.46e-07!4;UBERON:0003295!7.46e-07!4;UBERON:0005562!7.46e-07!4;UBERON:0001873!7.47e-07!2;UBERON:0010122!7.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.07e-11;1!UBERON:0001153;1.07e-11;1!UBERON:0009854;1.07e-11;1!UBERON:0002331;2.20e-10;10!UBERON:0000178;4.40e-07;15!UBERON:0000179;4.40e-07;15!UBERON:0000463;4.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,7.76e-12,1;UBERON:0001153,7.76e-12,1;UBERON:0001045,7.76e-12,1;UBERON:0002331,2.20e-10,10;UBERON:0000358,2.20e-10,10;UBERON:0000307,2.20e-10,10;UBERON:0000091,2.20e-10,10;UBERON:0000087,2.20e-10,10;UBERON:0007010,2.20e-10,10;UBERON:0007806,2.20e-10,10;UBERON:0008780,2.20e-10,10;UBERON:0005728,2.20e-10,10;UBERON:0000178,4.40e-07,15;UBERON:0000179,4.40e-07,15;UBERON:0000463,4.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,1.17903228824749,1.64481199199607,0.334372990781356,2.28145586643513,0.946895611469467,1.94826728407911,0.557052284425868,1.17842362989935,1.32920336750173,0.812411591295047,0.128091319725675,0,0.493313713811028,0.829050053357545,0.579606171470105,1.77943875794473,2.94294910898684,1.04535523804977,0,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,1.05402583354441,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,2.29133233388275,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0817183751411,11.4914463220248,11.5908363951055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,7.09795856554149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,1.48554492622814,0.869046000142011,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr21:32554871..32554883,- | |||
}} |
Latest revision as of 17:16, 28 July 2015
Short description: | p@chr21:32554871..32554883, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:32554871..32554883, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.43e-43 | 6 |
T cell | 1.07e-25 | 25 |
pro-T cell | 1.07e-25 | 25 |
regulatory T cell | 9.19e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.19e-22 | 2 |
naive regulatory T cell | 9.19e-22 | 2 |
mature alpha-beta T cell | 3.07e-20 | 18 |
alpha-beta T cell | 3.07e-20 | 18 |
immature T cell | 3.07e-20 | 18 |
mature T cell | 3.07e-20 | 18 |
immature alpha-beta T cell | 3.07e-20 | 18 |
naive T cell | 7.53e-15 | 3 |
lymphoid lineage restricted progenitor cell | 6.60e-12 | 52 |
lymphocyte | 1.15e-11 | 53 |
common lymphoid progenitor | 1.15e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 7.76e-12 | 1 |
caecum | 7.76e-12 | 1 |
midgut | 7.76e-12 | 1 |
umbilical cord | 2.20e-10 | 10 |
blastocyst | 2.20e-10 | 10 |
blastula | 2.20e-10 | 10 |
bilaminar disc | 2.20e-10 | 10 |
inner cell mass | 2.20e-10 | 10 |
cleaving embryo | 2.20e-10 | 10 |
connecting stalk | 2.20e-10 | 10 |
inner cell mass derived epiblast | 2.20e-10 | 10 |
extraembryonic mesoderm | 2.20e-10 | 10 |
blood | 4.40e-07 | 15 |
haemolymphatic fluid | 4.40e-07 | 15 |
organism substance | 4.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.53e-12 | 1 |
cutaneous T cell lymphoma | 4.53e-12 | 1 |
mycosis fungoides | 4.53e-12 | 1 |