FFCP PHASE1:Hg19::chr22:50331023..50331030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50331023..50331030,+ | |||
|description=CAGE_peak_at_chr22:50331023..50331030,+ | |description=CAGE_peak_at_chr22:50331023..50331030,+ | ||
|id=chr22:50331023..50331030,+ | |id=chr22:50331023..50331030,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.06e-23!24;CL:0000115!1.73e-21!35;CL:0000071!7.68e-21!18;CL:0002546!7.68e-21!18;CL:0002078!2.03e-15!44;CL:0002543!6.86e-11!6;CL:0000213!3.57e-10!57;CL:0000215!3.57e-10!57;CL:1000413!5.72e-08!9;CL:0000147!4.08e-07!14 | |ontology_enrichment_celltype=CL:0002139!2.06e-23!24;CL:0000115!1.73e-21!35;CL:0000071!7.68e-21!18;CL:0002546!7.68e-21!18;CL:0002078!2.03e-15!44;CL:0002543!6.86e-11!6;CL:0000213!3.57e-10!57;CL:0000215!3.57e-10!57;CL:1000413!5.72e-08!9;CL:0000147!4.08e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002543;8.94e-45;6!CL:0000071;2.78e-32;18!CL:0002139;1.66e-29;24!CL:0000115;1.09e-23;36!CL:0002618;3.72e-23;3!CL:0002567;9.15e-23;3!CL:0002078;3.27e-16;45!CL:0000213;2.08e-14;58!CL:0000215;2.08e-14;58!CL:0002144;5.69e-11;3!CL:0000148;3.38e-07;10!CL:0002188;3.66e-07;5 | |ontology_enrichment_celltype_v019=CL:0002543;8.94e-45;6!CL:0000071;2.78e-32;18!CL:0002139;1.66e-29;24!CL:0000115;1.09e-23;36!CL:0002618;3.72e-23;3!CL:0002567;9.15e-23;3!CL:0002078;3.27e-16;45!CL:0000213;2.08e-14;58!CL:0000215;2.08e-14;58!CL:0002144;5.69e-11;3!CL:0000148;3.38e-07;10!CL:0002188;3.66e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002543,6.89e-45,6;CL:0000115,5.43e-33,36;CL:0000071,3.12e-32,18;CL:0002546,3.12e-32,18;CL:0002139,1.64e-29,24;CL:0002078,6.37e-26,45;CL:0002618,4.50e-23,3;CL:0002567,7.06e-23,3;CL:0000213,1.40e-19,58;CL:0000215,1.40e-19,58;CL:0002144,7.30e-11,3;CL:0000076,3.06e-08,63;CL:0000222,3.84e-08,121;CL:0000148,3.13e-07,10;CL:0000541,3.13e-07,10;CL:0002188,3.66e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.78e-32;18 | |ontology_enrichment_development_v019=CL:0002546;2.78e-32;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.61e-16;2 | |ontology_enrichment_disease_v019=DOID:1909;5.61e-16;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.02e-16,2 | |||
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|short_description=p@chr22:50331023..50331030,+ | |short_description=p@chr22:50331023..50331030,+ | ||
}} | }} |
Latest revision as of 22:21, 28 July 2015
Short description: | p@chr22:50331023..50331030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50331023..50331030, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 6.89e-45 | 6 |
endothelial cell | 5.43e-33 | 36 |
blood vessel endothelial cell | 3.12e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.12e-32 | 18 |
endothelial cell of vascular tree | 1.64e-29 | 24 |
meso-epithelial cell | 6.37e-26 | 45 |
endothelial cell of umbilical vein | 4.50e-23 | 3 |
light melanocyte | 7.06e-23 | 3 |
lining cell | 1.40e-19 | 58 |
barrier cell | 1.40e-19 | 58 |
capillary endothelial cell | 7.30e-11 | 3 |
squamous epithelial cell | 3.06e-08 | 63 |
mesodermal cell | 3.84e-08 | 121 |
melanocyte | 3.13e-07 | 10 |
melanoblast | 3.13e-07 | 10 |
glomerular endothelial cell | 3.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.02e-16 | 2 |