FFCP PHASE1:Hg19::chr22:50912501..50912507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50912501..50912507,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr22:50912501..50912507,+ | |description=CAGE_peak_at_chr22:50912501..50912507,+ | ||
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|ontology_enrichment_celltype=CL:0000838!2.48e-07!52;CL:0000542!4.60e-07!53;CL:0000051!4.60e-07!53 | |ontology_enrichment_celltype=CL:0000838!2.48e-07!52;CL:0000542!4.60e-07!53;CL:0000051!4.60e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.18e-26;3!CL:0000226;5.88e-12;3!CL:0000842;5.88e-12;3!CL:0000791;1.19e-11;18!CL:0000789;1.19e-11;18!CL:0002419;1.19e-11;18!CL:0002568;1.36e-09;1!CL:0000084;2.44e-08;25!CL:0000625;1.28e-07;11 | |ontology_enrichment_celltype_v019=CL:0000623;1.18e-26;3!CL:0000226;5.88e-12;3!CL:0000842;5.88e-12;3!CL:0000791;1.19e-11;18!CL:0000789;1.19e-11;18!CL:0002419;1.19e-11;18!CL:0002568;1.36e-09;1!CL:0000084;2.44e-08;25!CL:0000625;1.28e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.24e-26,3;CL:0000825,1.24e-26,3;CL:0000226,2.85e-12,3;CL:0000842,2.85e-12,3;CL:0000791,1.30e-11,18;CL:0000789,1.30e-11,18;CL:0002420,1.30e-11,18;CL:0002419,1.30e-11,18;CL:0000790,1.30e-11,18;CL:0002568,1.62e-09,1;CL:0000838,1.94e-09,52;CL:0000542,3.07e-09,53;CL:0000051,3.07e-09,53;CL:0000084,2.61e-08,25;CL:0000827,2.61e-08,25;CL:0000625,1.25e-07,11;CL:0002087,5.00e-07,115;CL:0000738,7.57e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-11;18!UBERON:0003099;1.36e-09;1!UBERON:0003852;1.36e-09;1 | |ontology_enrichment_development_v019=CL:0000790;1.19e-11;18!UBERON:0003099;1.36e-09;1!UBERON:0003852;1.36e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0005743!5.20e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0005743!5.20e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.36e-09;1!UBERON:0008193;1.36e-09;1!UBERON:0010912;1.36e-09;1!UBERON:0002514;1.36e-09;1!UBERON:0003457;1.36e-09;1!UBERON:0008907;1.36e-09;1!UBERON:0008001;1.36e-09;1!UBERON:0007213;1.36e-09;1!UBERON:0009891;1.36e-09;1!UBERON:0007914;1.36e-09;1!UBERON:0007375;1.36e-09;1!UBERON:0003323;1.36e-09;1!UBERON:0010258;1.36e-09;1!UBERON:0005253;1.36e-09;1!UBERON:0007842;1.36e-09;1!UBERON:0002397;1.36e-09;1!UBERON:0003113;1.36e-09;1!UBERON:0003277;1.36e-09;1!UBERON:0001709;1.36e-09;1!UBERON:0002244;1.36e-09;1!UBERON:0005620;1.36e-09;1!UBERON:0010364;1.36e-09;1!UBERON:0004288;1.36e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0005705;1.36e-09;1!UBERON:0008193;1.36e-09;1!UBERON:0010912;1.36e-09;1!UBERON:0002514;1.36e-09;1!UBERON:0003457;1.36e-09;1!UBERON:0008907;1.36e-09;1!UBERON:0008001;1.36e-09;1!UBERON:0007213;1.36e-09;1!UBERON:0009891;1.36e-09;1!UBERON:0007914;1.36e-09;1!UBERON:0007375;1.36e-09;1!UBERON:0003323;1.36e-09;1!UBERON:0010258;1.36e-09;1!UBERON:0005253;1.36e-09;1!UBERON:0007842;1.36e-09;1!UBERON:0002397;1.36e-09;1!UBERON:0003113;1.36e-09;1!UBERON:0003277;1.36e-09;1!UBERON:0001709;1.36e-09;1!UBERON:0002244;1.36e-09;1!UBERON:0005620;1.36e-09;1!UBERON:0010364;1.36e-09;1!UBERON:0004288;1.36e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.46e-09,1;UBERON:0008193,2.46e-09,1;UBERON:0010912,2.46e-09,1;UBERON:0002514,2.46e-09,1;UBERON:0003457,2.46e-09,1;UBERON:0008907,2.46e-09,1;UBERON:0008001,2.46e-09,1;UBERON:0007213,2.46e-09,1;UBERON:0009891,2.46e-09,1;UBERON:0007914,2.46e-09,1;UBERON:0009292,2.46e-09,1;UBERON:0003099,2.46e-09,1;UBERON:0007375,2.46e-09,1;UBERON:0003323,2.46e-09,1;UBERON:0010258,2.46e-09,1;UBERON:0007842,2.46e-09,1;UBERON:0009494,2.46e-09,1;UBERON:0010042,2.46e-09,1;UBERON:0010045,2.46e-09,1;UBERON:0010259,2.46e-09,1;UBERON:0010359,2.46e-09,1;UBERON:0009526,2.46e-09,1;UBERON:0002397,2.46e-09,1;UBERON:0003113,2.46e-09,1;UBERON:0003277,2.46e-09,1;UBERON:0001709,2.46e-09,1;UBERON:0004066,2.46e-09,1;UBERON:0002244,2.46e-09,1;UBERON:0005620,2.46e-09,1;UBERON:0004362,2.46e-09,1;UBERON:0010364,2.46e-09,1;UBERON:0010046,2.46e-09,1;UBERON:0005868,2.46e-09,1;UBERON:0007238,2.46e-09,1;UBERON:0004288,2.46e-09,1;UBERON:0004068,2.46e-09,1;UBERON:0010334,2.46e-09,1;UBERON:0003852,2.46e-09,1;UBERON:0010253,2.46e-09,1 | |||
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|short_description=p@chr22:50912501..50912507,+ | |short_description=p@chr22:50912501..50912507,+ | ||
}} | }} |
Latest revision as of 22:29, 28 July 2015
Short description: | p@chr22:50912501..50912507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50912501..50912507, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.24e-26 | 3 |
pro-NK cell | 1.24e-26 | 3 |
single nucleate cell | 2.85e-12 | 3 |
mononuclear cell | 2.85e-12 | 3 |
mature alpha-beta T cell | 1.30e-11 | 18 |
alpha-beta T cell | 1.30e-11 | 18 |
immature T cell | 1.30e-11 | 18 |
mature T cell | 1.30e-11 | 18 |
immature alpha-beta T cell | 1.30e-11 | 18 |
mesenchymal stem cell of Wharton's jelly | 1.62e-09 | 1 |
lymphoid lineage restricted progenitor cell | 1.94e-09 | 52 |
lymphocyte | 3.07e-09 | 53 |
common lymphoid progenitor | 3.07e-09 | 53 |
T cell | 2.61e-08 | 25 |
pro-T cell | 2.61e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.25e-07 | 11 |
nongranular leukocyte | 5.00e-07 | 115 |
leukocyte | 7.57e-07 | 136 |