FFCP PHASE1:Hg19::chr2:155566280..155566292,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:155566280..155566292,+ | |||
|description=CAGE_peak_at_chr2:155566280..155566292,+ | |||
|id=chr2:155566280..155566292,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.19e-38;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.24e-15;2!DOID:4236;1.24e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.15e-15,2;DOID:4236,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-71!57;UBERON:0005068!1.02e-71!57;UBERON:0006241!1.02e-71!57;UBERON:0007135!1.02e-71!57;UBERON:0000955!1.49e-67!69;UBERON:0006238!1.49e-67!69;UBERON:0002616!5.54e-65!59;UBERON:0001017!6.93e-62!82;UBERON:0005743!1.78e-61!86;UBERON:0000073!9.32e-55!94;UBERON:0001016!9.32e-55!94;UBERON:0002780!1.70e-53!41;UBERON:0001890!1.70e-53!41;UBERON:0006240!1.70e-53!41;UBERON:0003080!4.47e-52!42;UBERON:0002346!3.43e-47!90;UBERON:0003075!4.69e-47!86;UBERON:0007284!4.69e-47!86;UBERON:0007023!1.03e-46!115;UBERON:0001893!1.85e-42!34;UBERON:0002020!5.75e-42!34;UBERON:0003528!5.75e-42!34;UBERON:0002791!7.37e-40!33;UBERON:0000033!8.24e-38!123;UBERON:0001869!2.46e-37!32;UBERON:0003056!2.26e-36!61;UBERON:0002619!4.39e-36!22;UBERON:0000153!1.38e-35!129;UBERON:0007811!1.38e-35!129;UBERON:0000956!2.05e-31!25;UBERON:0000203!2.05e-31!25;UBERON:0001950!2.44e-30!20;UBERON:0000924!8.67e-27!173;UBERON:0006601!8.67e-27!173;UBERON:0004121!3.92e-26!169;UBERON:0004733!2.31e-20!12;UBERON:0002028!2.31e-20!12;UBERON:0007277!2.31e-20!12;UBERON:0003076!7.57e-20!15;UBERON:0003057!7.57e-20!15;UBERON:0004732!1.16e-18!13;UBERON:0002298!2.25e-18!8;UBERON:0000025!5.73e-18!194;UBERON:0004111!1.79e-13!241;UBERON:0001871!2.10e-13!7;UBERON:0000200!3.89e-13!6;UBERON:0001894!2.34e-12!7;UBERON:0006222!2.34e-12!7;UBERON:0002680!2.37e-12!9;UBERON:0001895!2.37e-12!9;UBERON:0010092!2.37e-12!9;UBERON:0002308!7.75e-12!9;UBERON:0000125!7.75e-12!9;UBERON:0000477!2.45e-11!286;UBERON:0000349!6.67e-11!5;UBERON:0002021!1.06e-10!5;UBERON:0000475!1.27e-10!365;UBERON:0001896!1.34e-10!3;UBERON:0005290!1.34e-10!3;UBERON:0010096!1.34e-10!3;UBERON:0000064!6.39e-10!219;UBERON:0002771!7.82e-10!3;UBERON:0006331!1.00e-09!3;UBERON:0000483!1.19e-09!309;UBERON:0000988!1.37e-09!3;UBERON:0000119!1.83e-09!312;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0001897!4.22e-08!2;UBERON:0001954!4.67e-08!2;UBERON:0003022!4.67e-08!2;UBERON:0002421!4.67e-08!2;UBERON:0002600!4.67e-08!2;UBERON:0000007!5.54e-08!2;UBERON:0000481!1.73e-07!347;UBERON:0009663!2.63e-07!7;UBERON:0002148!5.13e-07!2;UBERON:0009662!5.13e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;9.36e-22;12!UBERON:0002028;9.36e-22;12!UBERON:0004732;3.79e-20;13!UBERON:0002037;1.04e-19;6!UBERON:0000007;2.21e-15;2!UBERON:0002680;1.69e-13;9!UBERON:0001895;1.69e-13;9!UBERON:0001896;1.04e-10;3!UBERON:0005290;1.04e-10;3!UBERON:0003296;2.35e-08;4!UBERON:0010133;2.35e-08;4!UBERON:0000073;4.43e-07;53!UBERON:0002616;4.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.41e-22,12;UBERON:0002028,8.41e-22,12;UBERON:0007277,8.41e-22,12;UBERON:0004732,3.43e-20,13;UBERON:0002037,9.49e-20,6;UBERON:0006215,9.49e-20,6;UBERON:0003076,1.31e-17,15;UBERON:0003057,1.31e-17,15;UBERON:0000007,2.74e-15,2;UBERON:0002680,1.58e-13,9;UBERON:0001895,1.58e-13,9;UBERON:0010092,1.58e-13,9;UBERON:0001896,9.90e-11,3;UBERON:0005290,9.90e-11,3;UBERON:0010096,9.90e-11,3;UBERON:0000073,7.90e-09,53;UBERON:0002616,7.90e-09,53;UBERON:0001049,2.18e-08,56;UBERON:0005068,2.18e-08,56;UBERON:0006241,2.18e-08,56;UBERON:0007135,2.18e-08,56;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0.344743373241465,5.54048765428183,6.94499979733169,0,0.241192877250816,1.52581736317083,1.21637185924347,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0.343189995723929,0,0,0,0.815425236441684,0.418411385249333,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.303747783290123,0,0.788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,1.33114861844223,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0.80057074828547,0,0,0.449604575675217,0,0.957803154342908,0.41023272848151,0.252071696221718,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0,0.606965604236632,1.13831095675649,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,6.25889780289286,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.930896962757057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:155566280..155566292,+ | |||
}} |
Latest revision as of 01:32, 29 July 2015
Short description: | p@chr2:155566280..155566292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:155566280..155566292, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 8.41e-22 | 12 |
hindbrain | 8.41e-22 | 12 |
presumptive hindbrain | 8.41e-22 | 12 |
segmental subdivision of nervous system | 3.43e-20 | 13 |
cerebellum | 9.49e-20 | 6 |
rhombic lip | 9.49e-20 | 6 |
posterior neural tube | 1.31e-17 | 15 |
chordal neural plate | 1.31e-17 | 15 |
pituitary gland | 2.74e-15 | 2 |
regional part of metencephalon | 1.58e-13 | 9 |
metencephalon | 1.58e-13 | 9 |
future metencephalon | 1.58e-13 | 9 |
medulla oblongata | 9.90e-11 | 3 |
myelencephalon | 9.90e-11 | 3 |
future myelencephalon | 9.90e-11 | 3 |
regional part of nervous system | 7.90e-09 | 53 |
regional part of brain | 7.90e-09 | 53 |
neural tube | 2.18e-08 | 56 |
neural rod | 2.18e-08 | 56 |
future spinal cord | 2.18e-08 | 56 |
neural keel | 2.18e-08 | 56 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
brain | 6.64e-07 | 68 |
future brain | 6.64e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.15e-15 | 2 |
carcinosarcoma | 1.15e-15 | 2 |