FFCP PHASE1:Hg19::chr2:75381438..75381451,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:75381438..75381451,+ | |||
|description=CAGE_peak_at_chr2:75381438..75381451,+ | |||
|id=chr2:75381438..75381451,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.52e-08!6;CL:0002138!1.52e-08!6;CL:0005022!1.52e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.61e-07,6;CL:0002138,2.61e-07,6;CL:0005022,2.61e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.53e-11;1!UBERON:0010227;9.04e-11;1!UBERON:0010115;9.04e-11;1!UBERON:0005425;9.04e-11;1!CL:0005022;3.35e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-39!115;UBERON:0001049!1.58e-13!57;UBERON:0005068!1.58e-13!57;UBERON:0006241!1.58e-13!57;UBERON:0007135!1.58e-13!57;UBERON:0003075!2.42e-11!86;UBERON:0007284!2.42e-11!86;UBERON:0002346!1.70e-10!90;UBERON:0002616!1.80e-10!59;UBERON:0005743!3.09e-10!86;UBERON:0001017!4.18e-10!82;UBERON:0004111!4.69e-10!241;UBERON:0003080!8.34e-10!42;UBERON:0000073!1.64e-09!94;UBERON:0001016!1.64e-09!94;UBERON:0000477!2.34e-09!286;UBERON:0002780!9.09e-09!41;UBERON:0001890!9.09e-09!41;UBERON:0006240!9.09e-09!41;UBERON:0002298!2.46e-08!8;UBERON:0000955!6.09e-08!69;UBERON:0006238!6.09e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.66e-20;2!UBERON:0002081;3.66e-20;2!UBERON:0004151;8.98e-14;3!UBERON:0000998;2.53e-11;1!UBERON:0006868;2.53e-11;1!UBERON:0000996;2.93e-11;1!UBERON:0002134;3.75e-11;1!UBERON:0005208;3.75e-11;1!UBERON:0004145;3.75e-11;1!UBERON:0005946;3.75e-11;1!UBERON:0005965;3.75e-11;1!UBERON:0002078;3.75e-11;1!UBERON:0002363;9.04e-11;1!UBERON:0002079;9.04e-11;1!UBERON:0002038;9.04e-11;1!UBERON:0000941;9.04e-11;1!UBERON:0001785;9.04e-11;1!UBERON:0002464;9.04e-11;1!UBERON:0004904;9.04e-11;1!UBERON:0001021;9.04e-11;1!UBERON:0009661;9.04e-11;1!UBERON:0002950;9.04e-11;1!UBERON:0001891;9.04e-11;1!UBERON:0003296;1.30e-10;4!UBERON:0010133;1.30e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,3.02e-20,2;UBERON:0010227,3.02e-20,2;UBERON:0003127,3.33e-20,2;UBERON:0007023,3.96e-14,114;UBERON:0004151,7.92e-14,3;UBERON:0000998,2.53e-11,1;UBERON:0006868,2.53e-11,1;UBERON:0000996,2.79e-11,1;UBERON:0002134,4.15e-11,1;UBERON:0005208,4.15e-11,1;UBERON:0005946,4.15e-11,1;UBERON:0005965,4.15e-11,1;UBERON:0002078,4.15e-11,1;UBERON:0002079,6.77e-11,1;UBERON:0000941,7.46e-11,1;UBERON:0001785,7.46e-11,1;UBERON:0002464,7.46e-11,1;UBERON:0004904,7.46e-11,1;UBERON:0001021,7.46e-11,1;UBERON:0003902,7.46e-11,1;UBERON:0005425,7.46e-11,1;UBERON:0002038,9.97e-11,1;UBERON:0009661,9.97e-11,1;UBERON:0002950,9.97e-11,1;UBERON:0001891,9.97e-11,1;UBERON:0009616,9.97e-11,1;UBERON:0010286,9.97e-11,1;UBERON:0003296,9.99e-11,4;UBERON:0010133,9.99e-11,4;UBERON:0002363,1.21e-10,1;UBERON:0007645,1.21e-10,1;UBERON:0007647,1.21e-10,1;UBERON:0010115,1.21e-10,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,1.90254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.591860433821602,0,0,0,0,0,2.3438498497671,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0,0.923403102045565,0,0.23056390438806,0.807818799687949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.581934098930517,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,2.15361907373044,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.687697182986169,0.83088067605837,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.79339561045614,0,0.704815022316672,0.747511887973863,0.943225830597996,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0.625954653532499,0,0.998361463831671,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0.676892955143315,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,4.03540466662589,0.606965604236632,1.82129753081038,0.177404740325278,0,0,0.0679697329768317,0,0,0.111231401892069,1.02041020705668,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,6.35080575286394,0,0,0,0.559277158988962,0,0.121917924982269,0,0.923965261706223,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,1.29005624836306,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.310298987585686,0.426467963801962,0.23806443146374,0,0.124149428591716,0,1.01835453245064,0.404234377916439,0.653150243690884,0,0,2.58199939413635,1.33064142618405,0,0,0,0,0,0.733448665097199,0,4.66029741929859,0,0 | |||
|short_description=p@chr2:75381438..75381451,+ | |||
}} |
Latest revision as of 12:25, 29 July 2015
Short description: | p@chr2:75381438..75381451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:75381438..75381451, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.61e-07 | 6 |
endothelial cell of lymphatic vessel | 2.61e-07 | 6 |
vascular lymphangioblast | 2.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 3.02e-20 | 2 |
future cardiac atrium | 3.02e-20 | 2 |
open tracheal system trachea | 3.33e-20 | 2 |
adult organism | 3.96e-14 | 114 |
cardiac chamber | 7.92e-14 | 3 |
seminal vesicle | 2.53e-11 | 1 |
seminal fluid secreting gland | 2.53e-11 | 1 |
vagina | 2.79e-11 | 1 |
tricuspid valve | 4.15e-11 | 1 |
right atrium valve | 4.15e-11 | 1 |
outflow tract of atrium | 4.15e-11 | 1 |
outflow part of right atrium | 4.15e-11 | 1 |
right cardiac atrium | 4.15e-11 | 1 |
left cardiac atrium | 6.77e-11 | 1 |
cranial nerve II | 7.46e-11 | 1 |
cranial nerve | 7.46e-11 | 1 |
nerve trunk | 7.46e-11 | 1 |
nerve connecting eye with brain | 7.46e-11 | 1 |
nerve | 7.46e-11 | 1 |
retinal neural layer | 7.46e-11 | 1 |
presumptive neural retina | 7.46e-11 | 1 |
substantia nigra | 9.97e-11 | 1 |
midbrain nucleus | 9.97e-11 | 1 |
regional part of midbrain | 9.97e-11 | 1 |
midbrain | 9.97e-11 | 1 |
presumptive midbrain | 9.97e-11 | 1 |
midbrain neural tube | 9.97e-11 | 1 |
gland of diencephalon | 9.99e-11 | 4 |
neuroendocrine gland | 9.99e-11 | 4 |
dura mater | 1.21e-10 | 1 |
future meninx | 1.21e-10 | 1 |
ectomeninx | 1.21e-10 | 1 |
future dura mater | 1.21e-10 | 1 |