FFCP PHASE1:Hg19::chr3:100244929..100244934,+: Difference between revisions
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|id=chr3:100244929..100244934,+
|short_description=p@chr3:100244929..100244934,+
|description=CAGE_peak_at_chr3:100244929..100244934,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:100244929..100244934,+ | |||
|description=CAGE_peak_at_chr3:100244929..100244934,+ | |||
|id=chr3:100244929..100244934,+ | |||
|ontology_enrichment_celltype=CL:0000243!7.67e-10!15;CL:0000125!7.67e-10!15;CL:0000030!7.67e-10!15;CL:0000339!7.67e-10!15;CL:0000095!1.29e-08!17;CL:0000123!1.29e-08!17 | |||
|ontology_enrichment_celltype_v019=CL:1001319;8.72e-18;1!CL:1000600;8.72e-18;1!CL:0000054;1.44e-09;2!CL:0000137;1.44e-09;2!CL:0000092;1.44e-09;2!CL:0002202;2.33e-08;9!CL:0002632;2.33e-08;9!CL:0000307;6.32e-07;3!CL:0000322;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.22e-17,1;CL:1000600,1.22e-17,1;CL:0000054,1.22e-09,2;CL:0000137,1.22e-09,2;CL:0000092,1.22e-09,2;CL:0002202,2.05e-08,9;CL:0002632,2.05e-08,9;CL:0000068,6.50e-07,3;CL:0000069,6.50e-07,3;CL:0000307,6.50e-07,3;CL:0000377,6.50e-07,3;CL:0000322,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.41e-14;5!CL:0000377;6.32e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!3.42e-14!143;DOID:14566!9.07e-14!239;DOID:1749!1.83e-12!14;DOID:162!6.39e-12!235;DOID:305!1.02e-07!106;DOID:3093!7.83e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.66e-18;1!DOID:0060085;8.72e-18;1!DOID:3165;8.72e-18;1!DOID:0060121;8.72e-18;1!DOID:2438;8.72e-18;1!DOID:4418;8.72e-18;1!DOID:200;1.44e-09;2!DOID:4305;1.44e-09;2!DOID:3910;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.66e-18,1;DOID:0060085,6.23e-18,1;DOID:3165,6.23e-18,1;DOID:0060121,6.23e-18,1;DOID:2438,6.23e-18,1;DOID:4418,6.23e-18,1;DOID:3910,1.03e-09,2;DOID:200,1.22e-09,2;DOID:4305,1.22e-09,2;DOID:7,3.95e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002394!9.40e-07!4;UBERON:0003928!9.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.72e-18;1!UBERON:0001282;8.72e-18;1!UBERON:0009842;8.72e-18;1!UBERON:0003704;8.72e-18;1!UBERON:0001171;8.72e-18;1!UBERON:0001256;8.72e-18;1!UBERON:0001172;8.72e-18;1!UBERON:0001259;8.72e-18;1!UBERON:0002394;2.02e-17;4!UBERON:0003928;2.02e-17;4!UBERON:0000058;1.92e-15;10!UBERON:0002046;2.41e-14;5!UBERON:0002294;2.24e-10;7!UBERON:0001173;2.24e-10;7!UBERON:0001255;1.44e-09;2!UBERON:0004903;1.44e-09;2!UBERON:0001556;1.44e-09;2!UBERON:0002173;1.44e-09;2!UBERON:0002186;1.44e-09;2!UBERON:0004821;8.62e-07;3!UBERON:0007499;8.62e-07;3!UBERON:0003215;8.62e-07;3!UBERON:0010368;8.62e-07;3!UBERON:0009911;8.62e-07;3!UBERON:0002299;8.62e-07;3!UBERON:0001280;8.62e-07;3!UBERON:0004647;8.62e-07;3!UBERON:0006524;8.62e-07;3!UBERON:0008874;8.62e-07;3!UBERON:0002169;8.62e-07;3!UBERON:0004894;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.37e-18,1;UBERON:0009842,7.37e-18,1;UBERON:0003704,7.37e-18,1;UBERON:0001171,7.37e-18,1;UBERON:0001172,7.37e-18,1;UBERON:0004645,1.22e-17,1;UBERON:0001256,1.22e-17,1;UBERON:0001259,1.22e-17,1;UBERON:0002046,2.58e-14,5;UBERON:0004117,2.58e-14,5;UBERON:0007689,2.58e-14,5;UBERON:0007123,2.58e-14,5;UBERON:0003091,2.58e-14,5;UBERON:0002394,5.68e-12,6;UBERON:0003928,5.68e-12,6;UBERON:0004903,1.03e-09,2;UBERON:0002173,1.03e-09,2;UBERON:0002186,1.03e-09,2;UBERON:0001255,1.71e-09,2;UBERON:0001556,1.71e-09,2;UBERON:0000058,1.79e-08,19;UBERON:0002294,2.75e-08,9;UBERON:0001173,2.75e-08,9;UBERON:0004912,2.75e-08,9;UBERON:0005911,4.54e-07,82;UBERON:0009722,5.31e-07,11;UBERON:0007690,5.31e-07,11;UBERON:0004821,6.88e-07,3;UBERON:0003215,6.88e-07,3;UBERON:0010368,6.88e-07,3;UBERON:0009911,6.88e-07,3;UBERON:0002299,6.88e-07,3;UBERON:0006524,6.88e-07,3;UBERON:0008874,6.88e-07,3;UBERON:0002169,6.88e-07,3;UBERON:0004894,6.88e-07,3;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,1.25815691606258,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.957651272384428,0,0.343972064943233,0,0,0,0,0,0,2.32971271899477,1.39100228192093,0,0,0.721429382263803,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0.951329442515298,1.15063130943567,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0.758245587708239,0.856396000634902,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0.567515953566836,0.368211900503681,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0,0.20170506870352,0,0,3.27543835020193,0.739280431085226,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.591660003652827,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,1.22104902916462,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,1.25815691606258,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.957651272384428,0,0.343972064943233,0,0,0,0,0,0,2.32971271899477,1.39100228192093,0,0,0.721429382263803,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0.951329442515298,1.15063130943567,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0.758245587708239,0.856396000634902,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0.567515953566836,0.368211900503681,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0,0.20170506870352,0,0,3.27543835020193,0.739280431085226,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.591660003652827,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:100244929..100244934,+ | |||
}} | }} |
Latest revision as of 13:37, 29 July 2015
Short description: | p@chr3:100244929..100244934, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100244929..100244934, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.22e-17 | 1 |
lower urinary tract cell | 1.22e-17 | 1 |
bone matrix secreting cell | 1.22e-09 | 2 |
osteocyte | 1.22e-09 | 2 |
osteoclast | 1.22e-09 | 2 |
epithelial cell of tracheobronchial tree | 2.05e-08 | 9 |
epithelial cell of lower respiratory tract | 2.05e-08 | 9 |
duct epithelial cell | 6.50e-07 | 3 |
branched duct epithelial cell | 6.50e-07 | 3 |
tracheal epithelial cell | 6.50e-07 | 3 |
tracheoblast | 6.50e-07 | 3 |
pneumocyte | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.66e-18 | 1 |
organ system benign neoplasm | 6.23e-18 | 1 |
skin benign neoplasm | 6.23e-18 | 1 |
integumentary system benign neoplasm | 6.23e-18 | 1 |
dermis tumor | 6.23e-18 | 1 |
cutaneous fibrous histiocytoma | 6.23e-18 | 1 |
lung adenocarcinoma | 1.03e-09 | 2 |
giant cell tumor | 1.22e-09 | 2 |
bone giant cell tumor | 1.22e-09 | 2 |
disease of anatomical entity | 3.95e-07 | 39 |