FFCP PHASE1:Hg19::chr3:43538305..43538325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:43538305..43538325,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr3:43538305..43538325,- | |description=CAGE_peak_at_chr3:43538305..43538325,- | ||
|id=chr3:43538305..43538325,- | |id=chr3:43538305..43538325,- | ||
|ontology_enrichment_celltype=CL:0000071!1.37e-69!18;CL:0002546!1.37e-69!18;CL:0002139!2.30e-69!24;CL:0000115!3.53e-66!35;CL:0002078!1.52e-55!44;CL:0000213!2.49e-41!57;CL:0000215!2.49e-41!57;CL:1000413!3.87e-35!9;CL:0000222!1.99e-32!119;CL:0002543!1.83e-24!6;CL:0002544!1.66e-23!6;CL:0000076!6.60e-17!62;CL:0000220!4.90e-14!246;CL:0002321!7.46e-14!248;CL:0002618!3.73e-13!3;CL:0002144!4.21e-13!3;CL:0000666!1.23e-09!4;CL:0002188!1.23e-09!4;CL:1000612!1.61e-09!7;CL:1000746!1.61e-09!7;CL:0002545!6.22e-09!2;CL:0002589!2.69e-08!2;CL:0000359!6.35e-08!32;CL:0000066!6.70e-07!254 | |ontology_enrichment_celltype=CL:0000071!1.37e-69!18;CL:0002546!1.37e-69!18;CL:0002139!2.30e-69!24;CL:0000115!3.53e-66!35;CL:0002078!1.52e-55!44;CL:0000213!2.49e-41!57;CL:0000215!2.49e-41!57;CL:1000413!3.87e-35!9;CL:0000222!1.99e-32!119;CL:0002543!1.83e-24!6;CL:0002544!1.66e-23!6;CL:0000076!6.60e-17!62;CL:0000220!4.90e-14!246;CL:0002321!7.46e-14!248;CL:0002618!3.73e-13!3;CL:0002144!4.21e-13!3;CL:0000666!1.23e-09!4;CL:0002188!1.23e-09!4;CL:1000612!1.61e-09!7;CL:1000746!1.61e-09!7;CL:0002545!6.22e-09!2;CL:0002589!2.69e-08!2;CL:0000359!6.35e-08!32;CL:0000066!6.70e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000071;5.06e-116;18!CL:0002139;1.80e-97;24!CL:0000115;3.11e-87;36!CL:0002078;9.15e-55;45!CL:0002543;5.99e-50;6!CL:1000413;1.04e-44;9!CL:0000213;1.82e-41;58!CL:0000215;1.82e-41;58!CL:0002188;8.12e-27;5!CL:0002618;5.06e-26;3!CL:0002144;5.28e-26;3!CL:0002544;3.78e-22;6!CL:1000746;3.05e-19;7!CL:1000612;3.05e-19;7!CL:0000076;2.55e-18;63!CL:0002681;2.56e-11;12!CL:0002584;2.56e-11;12!CL:1000449;4.35e-09;15!CL:1000497;4.92e-08;17!CL:0002518;4.92e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.37e-116,18;CL:0002546,4.37e-116,18;CL:0000115,1.87e-108,36;CL:0002139,2.04e-97,24;CL:0002078,3.82e-86,45;CL:0000213,3.95e-66,58;CL:0000215,3.95e-66,58;CL:0002543,5.29e-50,6;CL:1000413,8.30e-45,9;CL:0000222,5.59e-33,121;CL:0000076,2.75e-31,63;CL:0002188,8.99e-27,5;CL:0002618,5.28e-26,3;CL:0002144,6.81e-26,3;CL:0002544,3.58e-22,6;CL:1000746,3.27e-19,7;CL:1000612,3.27e-19,7;CL:0002321,5.23e-14,250;CL:0000066,1.63e-12,253;CL:0002681,2.66e-11,12;CL:0002584,2.66e-11,12;CL:1000449,4.50e-09,15;CL:1000497,5.06e-08,17;CL:0002518,5.06e-08,17 | |||
|ontology_enrichment_development_v019=CL:0002546;5.06e-116;18!CL:0000222;1.08e-12;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.06e-116;18!UBERON:0001986;5.06e-116;18!UBERON:0004852;5.06e-116;18!UBERON:0000487;1.79e-94;22!UBERON:0006914;7.85e-83;25!UBERON:0000490;1.53e-55;33!UBERON:0003915;1.04e-44;9!UBERON:0004700;1.04e-44;9!UBERON:0001917;1.04e-44;9!UBERON:0001638;3.31e-33;9!UBERON:0003920;3.31e-33;9!UBERON:0004582;3.31e-33;9!UBERON:0007500;1.49e-27;56!UBERON:0001981;1.49e-27;56!UBERON:0004537;1.49e-27;56!UBERON:0010523;5.28e-26;3!UBERON:0001915;5.28e-26;3!UBERON:0001982;5.28e-26;3!UBERON:0000055;1.62e-22;65!UBERON:0003914;3.36e-21;74!UBERON:0000074;3.05e-19;7!UBERON:0001229;3.05e-19;7!UBERON:0002049;9.26e-17;75!UBERON:0007798;9.26e-17;75!UBERON:0002066;7.22e-16;5!UBERON:0000025;4.33e-15;93!UBERON:0000353;9.21e-14;15!UBERON:0001637;7.27e-12;42!UBERON:0003509;7.27e-12;42!UBERON:0004572;7.27e-12;42!UBERON:0001225;2.56e-11;12!UBERON:0008987;2.56e-11;12!UBERON:0001009;1.25e-10;112!UBERON:0000483;6.61e-10;136!UBERON:0004111;7.35e-10;130!UBERON:0000119;8.04e-10;139!UBERON:0004535;1.92e-09;109!UBERON:0001851;4.35e-09;15!UBERON:0006555;4.35e-09;15!UBERON:0004819;4.35e-09;15!UBERON:0001285;4.35e-09;15!UBERON:0007684;4.35e-09;15!UBERON:0010260;4.75e-09;9 | |||
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|short_description=p@chr3:43538305..43538325,- | |short_description=p@chr3:43538305..43538325,- | ||
}} | }} |
Latest revision as of 21:08, 29 July 2015
Short description: | p@chr3:43538305..43538325, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:43538305..43538325, - |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.37e-116 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.37e-116 | 18 |
endothelial cell | 1.87e-108 | 36 |
endothelial cell of vascular tree | 2.04e-97 | 24 |
meso-epithelial cell | 3.82e-86 | 45 |
lining cell | 3.95e-66 | 58 |
barrier cell | 3.95e-66 | 58 |
vein endothelial cell | 5.29e-50 | 6 |
endothelial cell of artery | 8.30e-45 | 9 |
mesodermal cell | 5.59e-33 | 121 |
squamous epithelial cell | 2.75e-31 | 63 |
glomerular endothelial cell | 8.99e-27 | 5 |
endothelial cell of umbilical vein | 5.28e-26 | 3 |
capillary endothelial cell | 6.81e-26 | 3 |
aortic endothelial cell | 3.58e-22 | 6 |
glomerular cell | 3.27e-19 | 7 |
kidney corpuscule cell | 3.27e-19 | 7 |
embryonic cell | 5.23e-14 | 250 |
epithelial cell | 1.63e-12 | 253 |
kidney cortical cell | 2.66e-11 | 12 |
renal cortical epithelial cell | 2.66e-11 | 12 |
epithelial cell of nephron | 4.50e-09 | 15 |
kidney cell | 5.06e-08 | 17 |
kidney epithelial cell | 5.06e-08 | 17 |